RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, human

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11B-205	ENST00000611150	ITGA7	Q13683	1181 aa		18.91	■□□□□ 0.62
CDK11B-205	ENST00000611150	TTC30A	Q86WT1	665 aa		18.91	■□□□□ 0.62
CDK11B-205	ENST00000611150	UNC5CL	Q8IV45	518 aa		18.91	■□□□□ 0.62
CDK11B-205	ENST00000611150	TAF1D	Q9H5J8	278 aa	Predicted RBP	18.91	■□□□□ 0.62
CDK11B-205	ENST00000611150	CCDC87	Q9NVE4	849 aa		18.91	■□□□□ 0.62
CDK11B-205	ENST00000611150	FBXO9	Q9UK97	447 aa	Predicted RBP	18.91	■□□□□ 0.62
CDK11B-205	ENST00000611150	ADAMTS13	Q76LX8	1427 aa		18.91	■□□□□ 0.62
CDK11B-205	ENST00000611150	ZNF233	A6NK53	670 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	ADD1	P35611	737 aa	Known RBP	18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	INA	Q16352	499 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	RASIP1	Q5U651	963 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	GIGYF2	Q6Y7W6	1299 aa	Known RBP	18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	PROSER2	Q86WR7	435 aa	Predicted RBP	18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	PRCC	Q92733	491 aa	Predicted RBP	18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	MIS12	Q9H081	205 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	INIP	Q9NRY2	104 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	COMMD3-BMI1	R4GMX3	469 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	CDK12	Q9NYV4	1490 aa	Predicted RBP	18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	DYTN	A2CJ06	578 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	WFS1	O76024	890 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	PDGFRB	P09619	1106 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	MAP7	Q14244	749 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	GRAMD4	Q6IC98	578 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	IQCK	Q8N0W5	287 aa		18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150	EIF2A	Q9BY44	585 aa	Known RBP	18.9	■□□□□ 0.62
CDK11B-205	ENST00000611150		A0A1W2PQ27	194 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150		A0A1W2PQ64	194 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150		A0A1W2PQD8	194 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	HPD	P32754	393 aa	Predicted RBP	18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	CCT6A	P40227	531 aa	Known RBP	18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	MTTP	P55157	894 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	AOX1	Q06278	1338 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	TMEM94	Q12767	1356 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	LSAMP	Q13449	338 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	STKLD1	Q8NE28	680 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	MAML3	Q96JK9	1138 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	ADAM22	Q9P0K1	906 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	CTTNBP2NL	Q9P2B4	639 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	ZNF180	Q9UJW8	692 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	PSMD14	O00487	310 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	DMPK	Q09013	629 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	ADCK5	Q3MIX3	580 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	ADAL	Q6DHV7	355 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	OLFM4	Q6UX06	510 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	PPFIBP1	Q86W92	1011 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	BRF1	Q92994	677 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	ATP6V0A1	Q93050	837 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	TIPIN	Q9BVW5	301 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	MAK16	Q9BXY0	300 aa	Known RBP	18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	ATP8A2	Q9NTI2	1148 aa		18.89	■□□□□ 0.61
CDK11B-205	ENST00000611150	BIRC5	O15392	142 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	SERPINB4	P48594	390 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	GUCY2F	P51841	1108 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	NDUFA8	P51970	172 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	CACTIN-AS1	Q8N1I8	211 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	CAPZA3	Q96KX2	299 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	CATSPER2	Q96P56	530 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	PNPLA6	Q8IY17	1366 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	ZKSCAN1	P17029	563 aa	Predicted RBP	18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	GNAZ	P19086	355 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	VARS	P26640	1264 aa	Known RBP	18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	KCNJ2	P63252	427 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	PDE4B	Q07343	736 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	ITIH4	Q14624	930 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	PAPD7	Q5XG87	772 aa	Known RBP	18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	TBC1D9B	Q66K14	1250 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	ABTB1	Q969K4	478 aa	Predicted RBP	18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	LENG1	Q96BZ8	264 aa	Predicted RBP	18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	HAPLN3	Q96S86	360 aa		18.88	■□□□□ 0.61
CDK11B-205	ENST00000611150	RGL2	O15211	777 aa		18.87	■□□□□ 0.61
CDK11B-205	ENST00000611150	ANKK1	Q8NFD2	765 aa		18.87	■□□□□ 0.61
CDK11B-205	ENST00000611150	USP33	Q8TEY7	942 aa		18.87	■□□□□ 0.61
CDK11B-205	ENST00000611150	CCDC43	Q96MW1	224 aa	Known RBP	18.87	■□□□□ 0.61
CDK11B-205	ENST00000611150	PDP2	Q9P2J9	529 aa		18.87	■□□□□ 0.61
CDK11B-205	ENST00000611150	HESX1	Q9UBX0	185 aa		18.87	■□□□□ 0.61
CDK11B-205	ENST00000611150	NEXMIF	Q5QGS0	1516 aa		18.87	■□□□□ 0.61
CDK11B-205	ENST00000611150	TMEM110-MUSTN1	A8MSY1	372 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	DIAPH1	O60610	1272 aa	Known RBP	18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	GNA14	O95837	355 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	PAEP	P09466	180 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	ZC3H6	P61129	1189 aa	Known RBP	18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	CNPY1	Q3B7I2	92 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	IRF2BPL	Q9H1B7	796 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	C19orf44	Q9H6X5	657 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	WDR46	O15213	610 aa	Known RBP	18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	KDM1A	O60341	852 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	KRT9	P35527	623 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	MSH2	P43246	934 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	KANK3	Q6NY19	840 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	CYP26C1	Q6V0L0	522 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	MMGT1	Q8N4V1	131 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	USP28	Q96RU2	1077 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	QPCTL	Q9NXS2	382 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	STK24	Q9Y6E0	443 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	SETBP1	Q9Y6X0	1596 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150	CEMIP	Q8WUJ3	1361 aa		18.86	■□□□□ 0.61
CDK11B-205	ENST00000611150		A0A0J9YVX5	310 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	PEX5	P50542	639 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	PMS2	P54278	862 aa		18.85	■□□□□ 0.61
CDK11B-205	ENST00000611150	KLC3	Q6P597	504 aa		18.85	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms