RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 BCL9O00512 1426 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 ZBTB5O15062 677 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 GCFC2P16383 781 aaKnown RBP8.06□□□□□ -1.12
CSDE1-218ENST00000610726 ASIC2Q16515 512 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 TMED8Q6PL24 325 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-218ENST00000610726 PTF1AQ7RTS3 328 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 KRT26Q7Z3Y9 468 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 MAATS1Q7Z4T9 603 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 COL23A1Q86Y22 540 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-218ENST00000610726 CEP112Q8N8E3 955 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 TMEM87AQ8NBN3 555 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 OR8K1Q8NGG5 319 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 SAMSN1Q9NSI8 373 aaKnown RBP8.06□□□□□ -1.12
CSDE1-218ENST00000610726 CWC15Q9P013 229 aaKnown RBP8.06□□□□□ -1.12
CSDE1-218ENST00000610726 SALL3Q9BXA9 1300 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 K7ENM7 598 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 ATP1A3P13637 1013 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 USP14P54578 494 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 BRDTQ58F21 947 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-218ENST00000610726 GOLGA1Q92805 767 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 CCDC127Q96BQ5 260 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 ALDH8A1Q9H2A2 487 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-218ENST00000610726 TMEM260Q9NX78 707 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 FLT1P17948 1338 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 POTEMA6NI47 508 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 hCG_1984214I3L0E3 225 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 RIOK3O14730 519 aaKnown RBP8.06□□□□□ -1.12
CSDE1-218ENST00000610726 TNNI1P19237 187 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 TERF1P54274 439 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 SETQ01105 290 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-218ENST00000610726 PLCB3Q01970 1234 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 SPP2Q13103 211 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 HOOK3Q86VS8 718 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 ZNF713Q8N859 430 aaPredicted RBP8.06□□□□□ -1.12
CSDE1-218ENST00000610726 JAKMIP2Q96AA8 810 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 WRNIP1Q96S55 665 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 GOLPH3LQ9H4A5 285 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 NOD1Q9Y239 953 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 ZHX2Q9Y6X8 837 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 MYO3BQ8WXR4 1341 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 STK36Q9NRP7 1315 aa8.06□□□□□ -1.12
CSDE1-218ENST00000610726 DNM2P50570 870 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 TRPC3Q13507 836 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 GRM4Q14833 912 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 VWA3BQ502W6 1294 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 UTP14CQ5TAP6 766 aaKnown RBP8.05□□□□□ -1.12
CSDE1-218ENST00000610726 DEPTORQ8TB45 409 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 PAGE5Q96GU1 130 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 CARD6Q9BX69 1037 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 POLD4Q9HCU8 107 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 TRPC6Q9Y210 931 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 CEP83Q9Y592 693 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 MYOM1P52179 1685 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 FAM205CA6NFA0 338 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 BMS1Q14692 1282 aaKnown RBP8.05□□□□□ -1.12
CSDE1-218ENST00000610726 SLC15A2Q16348 729 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 STRIP1Q5VSL9 837 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 TTBK2Q6IQ55 1244 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 CCDC50Q8IVM0 306 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 DYDC1Q8WWB3 177 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 ERCC5P28715 1186 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-218ENST00000610726 ACTN2P35609 894 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 EVCP57679 992 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 KCTD2Q14681 263 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 QRICH1Q2TAL8 776 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 SEPT14Q6ZU15 432 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 LRRC8AQ8IWT6 810 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 DHX37Q8IY37 1157 aaKnown RBP8.05□□□□□ -1.12
CSDE1-218ENST00000610726 TTC16Q8NEE8 873 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 TUBGCP2Q9BSJ2 902 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 LSM14BQ9BX40 385 aaKnown RBP8.05□□□□□ -1.12
CSDE1-218ENST00000610726 OSBPL5Q9H0X9 879 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-218ENST00000610726 POLLQ9UGP5 575 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 PP2D1A8MPX8 630 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 KRT19P08727 400 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 COPB1P53618 953 aaKnown RBP8.05□□□□□ -1.12
CSDE1-218ENST00000610726 SMC1AQ14683 1233 aaKnown RBP8.05□□□□□ -1.12
CSDE1-218ENST00000610726 SLC10A5Q5PT55 438 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 SFMBT2Q5VUG0 894 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 ARL6IP4Q66PJ3 421 aaKnown RBP8.05□□□□□ -1.12
CSDE1-218ENST00000610726 CDC42EP5Q6NZY7 148 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 NAPGQ99747 312 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-218ENST00000610726 TRIM6Q9C030 488 aaPredicted RBP8.05□□□□□ -1.12
CSDE1-218ENST00000610726 CUEDC2Q9H467 287 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 PYCARDQ9ULZ3 195 aa8.05□□□□□ -1.12
CSDE1-218ENST00000610726 LRRIQ4A6NIV6 560 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 WTIPA6NIX2 430 aaPredicted RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 FGFR2P21802 821 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 PRPHP41219 470 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 NT5C2P49902 561 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 RCAN1P53805 252 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 IGBP1P78318 339 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 FAM160B2Q86V87 743 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 ADGRF4Q8IZF3 695 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 IFT81Q8WYA0 676 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 CNOT6LQ96LI5 555 aaKnown RBP8.04□□□□□ -1.12
CSDE1-218ENST00000610726 DISC1Q9NRI5 854 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 GDAQ9Y2T3 454 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 UBR1Q8IWV7 1749 aa8.04□□□□□ -1.12
CSDE1-218ENST00000610726 CCDC66A2RUB6 948 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms