RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 KCNJ12Q14500 433 aa13.27□□□□□ -0.29
TP53-220ENST00000610623 GLE1Q53GS7 698 aaKnown RBP13.27□□□□□ -0.29
TP53-220ENST00000610623 SUSD4Q5VX71 490 aa13.27□□□□□ -0.29
TP53-220ENST00000610623 USP49Q70CQ1 688 aa13.27□□□□□ -0.29
TP53-220ENST00000610623 IQCKQ8N0W5 287 aa13.27□□□□□ -0.29
TP53-220ENST00000610623 MYCBPAPQ8TBZ2 947 aa13.27□□□□□ -0.29
TP53-220ENST00000610623 ATP6V0A4Q9HBG4 840 aa13.27□□□□□ -0.29
TP53-220ENST00000610623 FAM217BQ9NTX9 383 aaPredicted RBP13.27□□□□□ -0.29
TP53-220ENST00000610623 TAB2Q9NYJ8 693 aa13.27□□□□□ -0.29
TP53-220ENST00000610623 DDX20Q9UHI6 824 aaKnown RBP13.27□□□□□ -0.29
TP53-220ENST00000610623 IFNAR1P17181 557 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 RXRAP19793 462 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 ZAP70P43403 619 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 ATP1A2P50993 1020 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 IFT88Q13099 833 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 PUM3Q15397 648 aaKnown RBP13.26□□□□□ -0.29
TP53-220ENST00000610623 CYB5D1Q6P9G0 228 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 WDR59Q6PJI9 974 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 CCDC121Q6ZUS5 278 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 SPATA4Q8NEY3 305 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 TRIM58Q8NG06 486 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 DDX12PQ92771 950 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 SGSM3Q96HU1 749 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 CCDC114Q96M63 670 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 SLC26A6Q9BXS9 759 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 CENPHQ9H3R5 247 aa13.26□□□□□ -0.29
TP53-220ENST00000610623 RTN2O75298 545 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 NR1D1P20393 614 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 ARID4AP29374 1257 aaPredicted RBP13.25□□□□□ -0.29
TP53-220ENST00000610623 MDH1P40925 334 aaKnown RBP13.25□□□□□ -0.29
TP53-220ENST00000610623 VAV2P52735 878 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 PAK1Q13153 545 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 ZKSCAN8Q15776 578 aaPredicted RBP13.25□□□□□ -0.29
TP53-220ENST00000610623 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 PPP4R3AQ6IN85 833 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 CYB5R4Q7L1T6 521 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 SMYD4Q8IYR2 804 aaPredicted RBP13.25□□□□□ -0.29
TP53-220ENST00000610623 FUKQ8N0W3 1084 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 OXER1Q8TDS5 423 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 HDAC7Q8WUI4 952 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 LPIN2Q92539 896 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 SCN7AQ01118 1682 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 PAX7P23759 505 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 SLC8A3P57103 927 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 GUCY1A3Q02108 690 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 KIF5AQ12840 1032 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 SCARF1Q14162 830 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 CFAP58Q5T655 872 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 NFXL1Q6ZNB6 911 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 CEP57Q86XR8 500 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 MB21D1Q8N884 522 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 ZNHIT6Q9NWK9 470 aaKnown RBP13.25□□□□□ -0.29
TP53-220ENST00000610623 DOCK2Q92608 1830 aa13.25□□□□□ -0.29
TP53-220ENST00000610623 A0A087X0B3 334 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 HMGB1P1B2RPK0 211 aaPredicted RBP13.24□□□□□ -0.29
TP53-220ENST00000610623 H7C1D1 291 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 SLC5A1P13866 664 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 TCP1P17987 556 aaKnown RBP13.24□□□□□ -0.29
TP53-220ENST00000610623 FGFR2P21802 821 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 LIFRP42702 1097 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 TLDC1Q6P9B6 456 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 CLEC4GQ6UXB4 293 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 TRIM22Q8IYM9 498 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 MREGQ8N565 214 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 SH2D3CQ8N5H7 860 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 IGDCC4Q8TDY8 1250 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 LACRTQ9GZZ8 138 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 GPAA1O43292 621 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 NTSR2O95665 410 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 KRT14P02533 472 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 MCAMP43121 646 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 CLNS1AP54105 237 aaKnown RBP13.24□□□□□ -0.29
TP53-220ENST00000610623 HDLBPQ00341 1268 aaKnown RBP13.24□□□□□ -0.29
TP53-220ENST00000610623 EZH2Q15910 746 aaKnown RBP13.24□□□□□ -0.29
TP53-220ENST00000610623 SH3D19Q5HYK7 790 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 RRAGBQ5VZM2 374 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 KCTD16Q68DU8 428 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 PLPP6Q8IY26 295 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 ARFGAP2Q8N6H7 521 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 P3H4Q92791 437 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 FERMT2Q96AC1 680 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 PUS7LQ9H0K6 701 aaKnown RBP13.24□□□□□ -0.29
TP53-220ENST00000610623 NHSQ6T4R5 1651 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 NID2Q14112 1375 aa13.24□□□□□ -0.29
TP53-220ENST00000610623 LGALS16A8MUM7 142 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 TACC1O75410 805 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 BMP15O95972 392 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 NBPF9Q3BBW0 867 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 HAUS3Q68CZ6 603 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 IFT20Q8IY31 132 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 ATP6V1G3Q96LB4 118 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 NUP58Q9BVL2 599 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 LY9Q9HBG7 655 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 TFR2Q9UP52 801 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 NIP7Q9Y221 180 aaKnown RBP eCLIP13.23□□□□□ -0.29
TP53-220ENST00000610623 THSD7AQ9UPZ6 1657 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 CNTNAP4Q9C0A0 1308 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 CASZ1Q86V15 1759 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 RCCD1A6NED2 376 aa13.23□□□□□ -0.29
TP53-220ENST00000610623 ZNF233A6NK53 670 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms