RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 TNNT3P45378 269 aaPredicted RBP8.58□□□□□ -1.04
LMBR1-221ENST00000609774 HNRNPH2P55795 449 aaKnown RBP8.58□□□□□ -1.04
LMBR1-221ENST00000609774 TBX2Q13207 712 aaPredicted RBP8.58□□□□□ -1.04
LMBR1-221ENST00000609774 PPIL2Q13356 520 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 HSP90B2PQ58FF3 399 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 FKBP1CQ5VVH2 108 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 RSRC2Q7L4I2 434 aaKnown RBP8.58□□□□□ -1.04
LMBR1-221ENST00000609774 SRGAP1Q7Z6B7 1085 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 TRIM22Q8IYM9 498 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 ANKRD20A12PQ8NF67 263 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 PXYLP1Q8TE99 480 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 TRIM47Q96LD4 638 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 MRIQ9BWK5 157 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 UBXN6Q9BZV1 441 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 FAM107BQ9H098 131 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 ELP3Q9H9T3 547 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 KCNH3Q9ULD8 1083 aa8.58□□□□□ -1.04
LMBR1-221ENST00000609774 CCDC196A0A1B0GTZ2 297 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 VWA3AA6NCI4 1184 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 ZBTB43O43298 467 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 CCL5P13501 91 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 XBP1P17861 261 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 OSBPP22059 807 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 CASP7P55210 303 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 UBXN2AP68543 259 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 FOXO4P98177 505 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 HDLBPQ00341 1268 aaKnown RBP8.57□□□□□ -1.04
LMBR1-221ENST00000609774 PPATQ06203 517 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 CHRNDQ07001 517 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 SSRP1Q08945 709 aaKnown RBP8.57□□□□□ -1.04
LMBR1-221ENST00000609774 SNAPC2Q13487 334 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 TRIM14Q14142 442 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 SART3Q15020 963 aaKnown RBP8.57□□□□□ -1.04
LMBR1-221ENST00000609774 WHAMMP3Q1A5X7 153 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 CCDC57Q2TAC2 916 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 MAP9Q49MG5 647 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 RILPL1Q5EBL4 403 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 TAF7LQ5H9L4 462 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 KRT40Q6A162 431 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 ATG9AQ7Z3C6 839 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 ANKRD23Q86SG2 305 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 VPS37DQ86XT2 251 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 CNGA4Q8IV77 575 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 IQUBQ8NA54 791 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 U2AF1L4Q8WU68 220 aaKnown RBP8.57□□□□□ -1.04
LMBR1-221ENST00000609774 CCDC12Q8WUD4 166 aaPredicted RBP8.57□□□□□ -1.04
LMBR1-221ENST00000609774 LRCH3Q96II8 777 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 CCDC85AQ96PX6 553 aaPredicted RBP8.57□□□□□ -1.04
LMBR1-221ENST00000609774 MTA3Q9BTC8 594 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 COL25A1Q9BXS0 654 aaPredicted RBP8.57□□□□□ -1.04
LMBR1-221ENST00000609774 RASSF4Q9H2L5 321 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 CNNM2Q9H8M5 875 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 RYDENQ9NUL5 291 aaKnown RBP8.57□□□□□ -1.04
LMBR1-221ENST00000609774 FANCLQ9NW38 375 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 TMEM51Q9NW97 253 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 MTMR10Q9NXD2 777 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 RAI14Q9P0K7 980 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 ZNF70Q9UC06 446 aaPredicted RBP8.57□□□□□ -1.04
LMBR1-221ENST00000609774 TTF2Q9UNY4 1162 aaKnown RBP8.57□□□□□ -1.04
LMBR1-221ENST00000609774 KCNH4Q9UQ05 1017 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 RIPOR2Q9Y4F9 1068 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 PCDHAC2Q9Y5I4 1007 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 SNCAIPQ9Y6H5 919 aa8.57□□□□□ -1.04
LMBR1-221ENST00000609774 CLRN2A0PK11 232 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 CTAGE9A4FU28 777 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 GOLGA8CPA6NN73 597 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 M0R2C6 588 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 IRF6O14896 467 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 FARP2O94887 1054 aaPredicted RBP8.56□□□□□ -1.04
LMBR1-221ENST00000609774 ITGA6P23229 1130 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 PSMC4P43686 418 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 PLCD1P51178 756 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 RCAN1P53805 252 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 CHMP4BP1P59074 171 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 SPAG1Q07617 926 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 IRF5Q13568 498 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 COL9A3Q14050 684 aaPredicted RBP8.56□□□□□ -1.04
LMBR1-221ENST00000609774 POSTNQ15063 836 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 PPP2R5BQ15173 497 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 PTPAQ15257 358 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 ZSCAN26Q16670 478 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 SHC4Q6S5L8 630 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 NFXL1Q6ZNB6 911 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 FAM83AQ86UY5 434 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 TMTC2Q8N394 836 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 CTCFLQ8NI51 663 aaPredicted RBP8.56□□□□□ -1.04
LMBR1-221ENST00000609774 ZNF512BQ96KM6 892 aaPredicted RBP8.56□□□□□ -1.04
LMBR1-221ENST00000609774 PARD6BQ9BYG5 372 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 RNF208Q9H0X6 261 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 PAK6Q9NQU5 681 aaPredicted RBP8.56□□□□□ -1.04
LMBR1-221ENST00000609774 CDC23Q9UJX2 597 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 CSADQ9Y600 493 aa8.56□□□□□ -1.04
LMBR1-221ENST00000609774 COL2A1P02458 1487 aaPredicted RBP8.56□□□□□ -1.04
LMBR1-221ENST00000609774 NEDD4P46934 1319 aa8.55□□□□□ -1.04
LMBR1-221ENST00000609774 UNC80Q8N2C7 3258 aa8.55□□□□□ -1.04
LMBR1-221ENST00000609774 MYH7P12883 1935 aa8.55□□□□□ -1.04
LMBR1-221ENST00000609774 ERICH2A1L162 156 aa8.55□□□□□ -1.04
LMBR1-221ENST00000609774 GOLGA8AA7E2F4 631 aa8.55□□□□□ -1.04
LMBR1-221ENST00000609774 SH2B2O14492 632 aaPredicted RBP8.55□□□□□ -1.04
LMBR1-221ENST00000609774 FGAP02671 866 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms