RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 TRPV6Q9H1D0 765 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 RWDD1Q9H446 243 aaPredicted RBP15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 ZNF576Q9H609 170 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 IL23AQ9NPF7 189 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 LCTP09848 1927 aa15.74■□□□□ 0.11
POLR2J3-219ENST00000608621 UMODL1Q5DID0 1318 aa15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 FGBP02675 491 aa15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 PCP11498 1178 aaKnown RBP15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 PBX2P40425 430 aa15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 MFAP1P55081 439 aaKnown RBP15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 PSRC1Q6PGN9 363 aaPredicted RBP15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 RNF207Q6ZRF8 634 aa15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 TBC1D10CQ8IV04 446 aa15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 PLEKHM2Q8IWE5 1019 aa15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 TIFAQ96CG3 184 aa15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 ZKSCAN3Q9BRR0 538 aa15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 HIPK3Q9H422 1215 aa15.73■□□□□ 0.11
POLR2J3-219ENST00000608621 UNC80Q8N2C7 3258 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 LOC102724159A0A0B4J2E5 919 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 RBM47A0AV96 593 aaKnown RBP15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 ZNF213O14771 459 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 B4GALT4O60513 344 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 IGHDP01880 384 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 SNHG28P0DPA3 235 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 CCL23P55773 120 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 AAMPQ13685 434 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 PWP2Q15269 919 aaKnown RBP15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 SLC30A10Q6XR72 485 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 CHD1LQ86WJ1 897 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 ESR2Q92731 530 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 PBX4Q9BYU1 374 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 UBA5Q9GZZ9 404 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 RNF41Q9H4P4 317 aaPredicted RBP15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 PNMA2Q9UL42 364 aa15.72■□□□□ 0.11
POLR2J3-219ENST00000608621 LRRC37A2A6NM11 1700 aa15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 MYL3P08590 195 aa15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 GOLGA8HP0CJ92 632 aa15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 RPS6P62753 249 aaKnown RBP15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 PDE4DQ08499 809 aa15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 CWC27Q6UX04 472 aaKnown RBP15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 DGKHQ86XP1 1220 aa15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 HERVK_113Q902F9 699 aa15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 NOC4LQ9BVI4 516 aaKnown RBP15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 CPVLQ9H3G5 476 aa15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 OSBPL3Q9H4L5 887 aa15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 POLR3EQ9NVU0 708 aa15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 CXXC1Q9P0U4 656 aaPredicted RBP15.71■□□□□ 0.11
POLR2J3-219ENST00000608621 NEDD4P46934 1319 aa15.7■□□□□ 0.1
POLR2J3-219ENST00000608621 WDR19Q8NEZ3 1342 aa15.7■□□□□ 0.1
POLR2J3-219ENST00000608621 PURAQ00577 322 aaKnown RBP15.7■□□□□ 0.1
POLR2J3-219ENST00000608621 NUCB1Q02818 461 aa15.7■□□□□ 0.1
POLR2J3-219ENST00000608621 USH1GQ495M9 461 aa15.7■□□□□ 0.1
POLR2J3-219ENST00000608621 GPATCH4Q5T3I0 446 aaKnown RBP15.7■□□□□ 0.1
POLR2J3-219ENST00000608621 OTOP2Q7RTS6 562 aa15.7■□□□□ 0.1
POLR2J3-219ENST00000608621 OR6J1Q8NGC5 347 aa15.7■□□□□ 0.1
POLR2J3-219ENST00000608621 ALDH8A1Q9H2A2 487 aaPredicted RBP15.7■□□□□ 0.1
POLR2J3-219ENST00000608621 MYO9BQ13459 2157 aa15.7■□□□□ 0.1
POLR2J3-219ENST00000608621 KDM4AO75164 1064 aa15.69■□□□□ 0.1
POLR2J3-219ENST00000608621 CPT1AP50416 773 aa15.69■□□□□ 0.1
POLR2J3-219ENST00000608621 CCDC178Q5BJE1 867 aa15.69■□□□□ 0.1
POLR2J3-219ENST00000608621 RPUSD2Q8IZ73 545 aaKnown RBP15.69■□□□□ 0.1
POLR2J3-219ENST00000608621 DNERQ8NFT8 737 aa15.69■□□□□ 0.1
POLR2J3-219ENST00000608621 TBC1D5Q92609 795 aa15.69■□□□□ 0.1
POLR2J3-219ENST00000608621 SCLYQ96I15 445 aa15.69■□□□□ 0.1
POLR2J3-219ENST00000608621 MPHOSPH6Q99547 160 aaKnown RBP15.69■□□□□ 0.1
POLR2J3-219ENST00000608621 WNT8AQ9H1J5 351 aa15.69■□□□□ 0.1
POLR2J3-219ENST00000608621 GPHNQ9NQX3 736 aaPredicted RBP15.69■□□□□ 0.1
POLR2J3-219ENST00000608621 MSRAQ9UJ68 235 aa15.69■□□□□ 0.1
POLR2J3-219ENST00000608621 NKRFO15226 690 aaKnown RBP eCLIP15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 SUPT20HL2P0C7V6 817 aa15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 CYP2C9P11712 490 aa15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 EDNRBP24530 442 aa15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 IQCA1Q86XH1 822 aa15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 PNMA1Q8ND90 353 aa15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 RGS22Q8NE09 1264 aa15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 EXOC6Q8TAG9 804 aa15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 COPS5Q92905 334 aa15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 GAS2L1Q99501 681 aaPredicted RBP15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 MTG1Q9BT17 334 aaPredicted RBP15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 MTIF3Q9H2K0 278 aaKnown RBP15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 PRDM12Q9H4Q4 367 aa15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 KAT14Q9H8E8 782 aa15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 DIAPH3Q9NSV4 1193 aa15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 TRMT13Q9NUP7 481 aaKnown RBP15.68■□□□□ 0.1
POLR2J3-219ENST00000608621 B4DLN1 442 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 B4E1Z4 1266 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 TXNP10599 105 aaKnown RBP15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 MRPL12P52815 198 aaKnown RBP15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 PPP2R5BQ15173 497 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 RAB30Q15771 203 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 NBPF20Q3BBV1 942 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 BRDTQ58F21 947 aaPredicted RBP15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 ADGRF4Q8IZF3 695 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 USP38Q8NB14 1042 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 SCFD2Q8WU76 684 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 PPP1R13LQ8WUF5 828 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 ANKS1AQ92625 1134 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 VWCEQ96DN2 955 aa15.67■□□□□ 0.1
POLR2J3-219ENST00000608621 TAAR1Q96RJ0 339 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms