RNA–Protein interactions for RNA: ENST00000607388.1

RPF2-204, Transcript of ribosome production factor 2 homolog, humanhuman

TSL 1 (best)

Gene RPF2, Length 3,621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF2-204ENST00000607388 KCTD1Q719H9 257 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 PTF1AQ7RTS3 328 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 SGMS1Q86VZ5 419 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 MB21D1Q8N884 522 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 TBCKQ8TEA7 893 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 RPGRQ92834 1020 aaKnown RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 SCLT1Q96NL6 688 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 NLRP3Q96P20 1036 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 GSDMAQ96QA5 445 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 MTRQ99707 1265 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 RNF26Q9BY78 433 aaPredicted RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 ADAM33Q9BZ11 813 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 DNAJC17Q9NVM6 304 aaKnown RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 KCNK3O14649 394 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 CLIC2O15247 247 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 GTPBP6O43824 516 aaPredicted RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 HSF2BPO75031 334 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 ERCC5P28715 1186 aaPredicted RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 SPAG1Q07617 926 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 IFFO1Q0D2I5 559 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 IL17AQ16552 155 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 CFAP58Q5T655 872 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 KIRREL3Q8IZU9 778 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 FAM133AQ8N9E0 248 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 TAF4BQ92750 862 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 PCDHB13Q9Y5F0 798 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 MYH10P35580 1976 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 LOC102724428A0A0B4J2F2 783 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 E7EVH7 732 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 DDX39AO00148 427 aaKnown RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 EPHB6O15197 1021 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 SORBS3O60504 671 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 TDP2O95551 362 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 LDHBP07195 334 aaKnown RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 GJC1P36383 396 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 SIK1P57059 783 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 KRT83P78385 493 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 CEP85LQ5SZL2 805 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 GOLGA5Q8TBA6 731 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 SH3RF3Q8TEJ3 882 aaPredicted RBP7.19□□□□□ -1.26
RPF2-204ENST00000607388 TBC1D5Q92609 795 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 FERMT2Q96AC1 680 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 ARL8AQ96BM9 186 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 SETDB2Q96T68 719 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 MXD3Q9BW11 206 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 CCDC87Q9NVE4 849 aa7.19□□□□□ -1.26
RPF2-204ENST00000607388 LRRC53A6NM62 1247 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 ZNF76P36508 570 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 RPS8P62241 208 aaKnown RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 DHX9Q08211 1270 aaKnown RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 E2F5Q15329 346 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 GRIK5Q16478 980 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 KIAA0753Q2KHM9 967 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 TMTC3Q6ZXV5 915 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 RSRC2Q7L4I2 434 aaKnown RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 TEX11Q8IYF3 940 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 MGARPQ8TDB4 240 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 MLXIPLQ9NP71 852 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 DCP1AQ9NPI6 582 aaPredicted RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 RMND1Q9NWS8 449 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 L1RE1Q9UN81 338 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 MROH5Q6ZUA9 1318 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 RTL9Q8NET4 1388 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 TCRBV5S4A2TA0A5A2 114 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 GOLGA6L10A6NI86 522 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 CSF1RP07333 972 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 ACTN1P12814 892 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 GNAT2P19087 354 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 SSR1P43307 286 aaKnown RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 SLCO1A2P46721 670 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 VPS41P49754 854 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 TROAPQ12815 778 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 IFT88Q13099 833 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 NKX1-1Q15270 411 aaPredicted RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 ARHGAP44Q17R89 818 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 SRLQ86TD4 932 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 SEPT12Q8IYM1 358 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 SPICE1Q8N0Z3 855 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 OTUD6BQ8N6M0 293 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 THOC1Q96FV9 657 aaKnown RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 FAM84BQ96KN1 310 aaPredicted RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 ALS2CR12Q96Q35 445 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 PANX2Q96RD6 677 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 SELENOSQ9BQE4 189 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 LSM14BQ9BX40 385 aaKnown RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 DISC1Q9NRI5 854 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 PIK3C2AO00443 1686 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 STAT3P40763 770 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 SLC1A4P43007 532 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 IFNAR2P48551 515 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 SP4Q02446 784 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 ACTN3Q08043 901 aaPredicted RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 ZNF658Q5TYW1 1059 aaPredicted RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 FAM43BQ6ZT52 329 aaPredicted RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 SV2BQ7L1I2 683 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 TAB3Q8N5C8 712 aaPredicted RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 STAG1Q8WVM7 1258 aa7.18□□□□□ -1.26
RPF2-204ENST00000607388 ARPP21Q9UBL0 812 aaPredicted RBP7.18□□□□□ -1.26
RPF2-204ENST00000607388 TRPC5Q9UL62 973 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms