RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 FGAP02671 866 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 NKX3-2P78367 333 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 NMIQ13287 307 aaPredicted RBP17.48■□□□□ 0.39
CTSA-216ENST00000607212 ALX1Q15699 326 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 TMEM63BQ5T3F8 832 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 RNF207Q6ZRF8 634 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 MFSD6Q6ZSS7 791 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 RPUSD2Q8IZ73 545 aaKnown RBP17.48■□□□□ 0.39
CTSA-216ENST00000607212 USP38Q8NB14 1042 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 HERVK_113Q902F9 699 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 SEZ6LQ9BYH1 1024 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 NKX2-4Q9H2Z4 354 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 SLC28A3Q9HAS3 691 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 POLR3EQ9NVU0 708 aa17.48■□□□□ 0.39
CTSA-216ENST00000607212 RAD50Q92878 1312 aa17.47■□□□□ 0.39
CTSA-216ENST00000607212 HSPD1P10809 573 aaKnown RBP17.47■□□□□ 0.39
CTSA-216ENST00000607212 CPT1AP50416 773 aa17.47■□□□□ 0.39
CTSA-216ENST00000607212 DUSP28Q4G0W2 176 aa17.47■□□□□ 0.39
CTSA-216ENST00000607212 SLC30A10Q6XR72 485 aa17.47■□□□□ 0.39
CTSA-216ENST00000607212 SLC43A3Q8NBI5 491 aa17.47■□□□□ 0.39
CTSA-216ENST00000607212 SCLYQ96I15 445 aa17.47■□□□□ 0.39
CTSA-216ENST00000607212 NOC4LQ9BVI4 516 aaKnown RBP17.47■□□□□ 0.39
CTSA-216ENST00000607212 CXXC1Q9P0U4 656 aaPredicted RBP17.47■□□□□ 0.39
CTSA-216ENST00000607212 PNMA2Q9UL42 364 aa17.47■□□□□ 0.39
CTSA-216ENST00000607212 SALL3Q9BXA9 1300 aa17.47■□□□□ 0.39
CTSA-216ENST00000607212 LAMA2P24043 3122 aaKnown RBP17.46■□□□□ 0.39
CTSA-216ENST00000607212 B4DLN1 442 aa17.46■□□□□ 0.39
CTSA-216ENST00000607212 MRPL12P52815 198 aaKnown RBP17.46■□□□□ 0.39
CTSA-216ENST00000607212 MFAP1P55081 439 aaKnown RBP17.46■□□□□ 0.39
CTSA-216ENST00000607212 PPP2R5BQ15173 497 aa17.46■□□□□ 0.39
CTSA-216ENST00000607212 CCDC85BQ15834 202 aaPredicted RBP17.46■□□□□ 0.39
CTSA-216ENST00000607212 USH1GQ495M9 461 aa17.46■□□□□ 0.39
CTSA-216ENST00000607212 BTNL9Q6UXG8 535 aa17.46■□□□□ 0.39
CTSA-216ENST00000607212 DEFB128Q7Z7B8 93 aa17.46■□□□□ 0.39
CTSA-216ENST00000607212 MICALL1Q8N3F8 863 aa17.46■□□□□ 0.39
CTSA-216ENST00000607212 IL27Q8NEV9 243 aa17.46■□□□□ 0.39
CTSA-216ENST00000607212 LNPKQ9C0E8 428 aa17.46■□□□□ 0.39
CTSA-216ENST00000607212 RNF41Q9H4P4 317 aaPredicted RBP17.46■□□□□ 0.39
CTSA-216ENST00000607212 SLC4A7Q9Y6M7 1214 aa17.46■□□□□ 0.39
CTSA-216ENST00000607212 GRIN2DO15399 1336 aa17.46■□□□□ 0.38
CTSA-216ENST00000607212 CCDC171Q6TFL3 1326 aa17.46■□□□□ 0.38
CTSA-216ENST00000607212 SUPT20HL2P0C7V6 817 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 PDHBP11177 359 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 CYP2C9P11712 490 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 RABGGTBP53611 331 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 TJAP1Q5JTD0 557 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 AKNAD1Q5T1N1 836 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 RASIP1Q5U651 963 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 B4GALNT3Q6L9W6 998 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 ZNF589Q86UQ0 364 aaPredicted RBP17.45■□□□□ 0.38
CTSA-216ENST00000607212 ZKSCAN3Q9BRR0 538 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 MTG1Q9BT17 334 aaPredicted RBP17.45■□□□□ 0.38
CTSA-216ENST00000607212 ALDH8A1Q9H2A2 487 aaPredicted RBP17.45■□□□□ 0.38
CTSA-216ENST00000607212 PRDM6Q9NQX0 595 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 TCP11L1Q9NUJ3 509 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 TRMT13Q9NUP7 481 aaKnown RBP17.45■□□□□ 0.38
CTSA-216ENST00000607212 NOD1Q9Y239 953 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 TNKSO95271 1327 aa17.45■□□□□ 0.38
CTSA-216ENST00000607212 DHX16O60231 1041 aaKnown RBP17.44■□□□□ 0.38
CTSA-216ENST00000607212 FGRP09769 529 aa17.44■□□□□ 0.38
CTSA-216ENST00000607212 GOLGA8HP0CJ92 632 aa17.44■□□□□ 0.38
CTSA-216ENST00000607212 RPS6P62753 249 aaKnown RBP17.44■□□□□ 0.38
CTSA-216ENST00000607212 ZNF543Q08ER8 600 aa17.44■□□□□ 0.38
CTSA-216ENST00000607212 PPP2R2DQ66LE6 453 aa17.44■□□□□ 0.38
CTSA-216ENST00000607212 MORC4Q8TE76 937 aa17.44■□□□□ 0.38
CTSA-216ENST00000607212 ESR2Q92731 530 aa17.44■□□□□ 0.38
CTSA-216ENST00000607212 WNT8AQ9H1J5 351 aa17.44■□□□□ 0.38
CTSA-216ENST00000607212 A0A0C4DFX4 3053 aa17.44■□□□□ 0.38
CTSA-216ENST00000607212 LOC102724159A0A0B4J2E5 919 aa17.43■□□□□ 0.38
CTSA-216ENST00000607212 NOVP48745 357 aa17.43■□□□□ 0.38
CTSA-216ENST00000607212 PURAQ00577 322 aaKnown RBP17.43■□□□□ 0.38
CTSA-216ENST00000607212 PWP2Q15269 919 aaKnown RBP17.43■□□□□ 0.38
CTSA-216ENST00000607212 RETREG2Q8NC44 543 aa17.43■□□□□ 0.38
CTSA-216ENST00000607212 PPP1R13LQ8WUF5 828 aa17.43■□□□□ 0.38
CTSA-216ENST00000607212 TTC14Q96N46 770 aa17.43■□□□□ 0.38
CTSA-216ENST00000607212 THEGQ9P2T0 379 aa17.43■□□□□ 0.38
CTSA-216ENST00000607212 MYH6P13533 1939 aa17.43■□□□□ 0.38
CTSA-216ENST00000607212 UNC80Q8N2C7 3258 aa17.43■□□□□ 0.38
CTSA-216ENST00000607212 ZNF213O14771 459 aa17.42■□□□□ 0.38
CTSA-216ENST00000607212 NKRFO15226 690 aaKnown RBP eCLIP17.42■□□□□ 0.38
CTSA-216ENST00000607212 TXNP10599 105 aaKnown RBP17.42■□□□□ 0.38
CTSA-216ENST00000607212 PCP11498 1178 aaKnown RBP17.42■□□□□ 0.38
CTSA-216ENST00000607212 ACTN1P12814 892 aa17.42■□□□□ 0.38
CTSA-216ENST00000607212 HDAC1Q13547 482 aaPredicted RBP17.42■□□□□ 0.38
CTSA-216ENST00000607212 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
CTSA-216ENST00000607212 SCFD2Q8WU76 684 aa17.42■□□□□ 0.38
CTSA-216ENST00000607212 CLEC4DQ8WXI8 215 aa17.42■□□□□ 0.38
CTSA-216ENST00000607212 COPS5Q92905 334 aa17.42■□□□□ 0.38
CTSA-216ENST00000607212 FTOQ9C0B1 505 aaKnown RBP eCLIP17.42■□□□□ 0.38
CTSA-216ENST00000607212 UBA5Q9GZZ9 404 aa17.42■□□□□ 0.38
CTSA-216ENST00000607212 KAT14Q9H8E8 782 aa17.42■□□□□ 0.38
CTSA-216ENST00000607212 DIAPH3Q9NSV4 1193 aa17.42■□□□□ 0.38
CTSA-216ENST00000607212 YBX2Q9Y2T7 364 aaKnown RBP17.42■□□□□ 0.38
CTSA-216ENST00000607212 ZMYM6O95789 1325 aa17.42■□□□□ 0.38
CTSA-216ENST00000607212 SCN5AQ14524 2016 aa17.42■□□□□ 0.38
CTSA-216ENST00000607212 ATP2A2P16615 1042 aaKnown RBP17.41■□□□□ 0.38
CTSA-216ENST00000607212 TTLL4Q14679 1199 aa17.41■□□□□ 0.38
CTSA-216ENST00000607212 NBPF20Q3BBV1 942 aa17.41■□□□□ 0.38
CTSA-216ENST00000607212 GPATCH4Q5T3I0 446 aaKnown RBP17.41■□□□□ 0.38
CTSA-216ENST00000607212 IQCA1Q86XH1 822 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms