RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 MFSD14CQ5VZR4 134 aa16.48■□□□□ 0.23
CTSA-211ENST00000606066 ZNF467Q7Z7K2 595 aaPredicted RBP16.48■□□□□ 0.23
CTSA-211ENST00000606066 MSL3Q8N5Y2 521 aaKnown RBP16.48■□□□□ 0.23
CTSA-211ENST00000606066 SAMD3Q8N6K7 520 aa16.48■□□□□ 0.23
CTSA-211ENST00000606066 TRIB2Q92519 343 aa16.48■□□□□ 0.23
CTSA-211ENST00000606066 MAML3Q96JK9 1138 aa16.48■□□□□ 0.23
CTSA-211ENST00000606066 MAP3K20Q9NYL2 800 aaKnown RBP16.48■□□□□ 0.23
CTSA-211ENST00000606066 TPCN1Q9ULQ1 816 aa16.48■□□□□ 0.23
CTSA-211ENST00000606066 V9GY48 417 aaPredicted RBP16.48■□□□□ 0.23
CTSA-211ENST00000606066 CNTNAP5Q8WYK1 1306 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 ZSWIM8A7E2V4 1837 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 COL11A1P12107 1806 aaPredicted RBP16.47■□□□□ 0.23
CTSA-211ENST00000606066 A0A1W2PPC1 479 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 ST18O60284 1047 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 CDKL5O76039 1030 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 INHAP05111 366 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 IFNAR1P17181 557 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 FUT2Q10981 343 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 STK3Q13188 491 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 BAATQ14032 418 aaPredicted RBP16.47■□□□□ 0.23
CTSA-211ENST00000606066 CCL14Q16627 93 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 UNC93B1Q9H1C4 597 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 ADD3Q9UEY8 706 aaKnown RBP16.47■□□□□ 0.23
CTSA-211ENST00000606066 MGAMO43451 1857 aa16.47■□□□□ 0.23
CTSA-211ENST00000606066 hCG_1984214I3L0E3 225 aa16.46■□□□□ 0.23
CTSA-211ENST00000606066 PFKFB2O60825 505 aa16.46■□□□□ 0.23
CTSA-211ENST00000606066 CALML3P27482 149 aa16.46■□□□□ 0.23
CTSA-211ENST00000606066 RPS6P62753 249 aaKnown RBP16.46■□□□□ 0.23
CTSA-211ENST00000606066 TRIM22Q8IYM9 498 aa16.46■□□□□ 0.23
CTSA-211ENST00000606066 ZNF713Q8N859 430 aaPredicted RBP16.46■□□□□ 0.23
CTSA-211ENST00000606066 FAM133AQ8N9E0 248 aa16.46■□□□□ 0.23
CTSA-211ENST00000606066 MPHOSPH6Q99547 160 aaKnown RBP16.46■□□□□ 0.23
CTSA-211ENST00000606066 RNF26Q9BY78 433 aaPredicted RBP16.46■□□□□ 0.23
CTSA-211ENST00000606066 NCOA5Q9HCD5 579 aaKnown RBP16.46■□□□□ 0.23
CTSA-211ENST00000606066 LIMCH1Q9UPQ0 1083 aa16.46■□□□□ 0.23
CTSA-211ENST00000606066 hCG_1642624A0A1W2PR95 340 aa16.45■□□□□ 0.22
CTSA-211ENST00000606066 ASB14A6NK59 587 aa16.45■□□□□ 0.22
CTSA-211ENST00000606066 B4DLN1 442 aa16.45■□□□□ 0.22
CTSA-211ENST00000606066 PRPF3O43395 683 aaKnown RBP16.45■□□□□ 0.22
CTSA-211ENST00000606066 FARP2O94887 1054 aaPredicted RBP16.45■□□□□ 0.22
CTSA-211ENST00000606066 CFBP00751 764 aa16.45■□□□□ 0.22
CTSA-211ENST00000606066 MRPL12P52815 198 aaKnown RBP16.45■□□□□ 0.22
CTSA-211ENST00000606066 SCRN1Q12765 414 aa16.45■□□□□ 0.22
CTSA-211ENST00000606066 NTRK3Q16288 839 aa16.45■□□□□ 0.22
CTSA-211ENST00000606066 NOL8Q76FK4 1167 aaKnown RBP16.45■□□□□ 0.22
CTSA-211ENST00000606066 HEATR3Q7Z4Q2 680 aa16.45■□□□□ 0.22
CTSA-211ENST00000606066 ZSCAN31Q96LW9 406 aaPredicted RBP16.45■□□□□ 0.22
CTSA-211ENST00000606066 TINF2Q9BSI4 451 aa16.45■□□□□ 0.22
CTSA-211ENST00000606066 CRISPLD2Q9H0B8 497 aa16.45■□□□□ 0.22
CTSA-211ENST00000606066 PAK6Q9NQU5 681 aaPredicted RBP16.45■□□□□ 0.22
CTSA-211ENST00000606066 FLRT1Q9NZU1 646 aa16.45■□□□□ 0.22
CTSA-211ENST00000606066 ZNF236Q9UL36 1845 aa16.45■□□□□ 0.22
CTSA-211ENST00000606066 LOC102724159A0A0B4J2E5 919 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 GCOM1H8Y6P7 765 aaPredicted RBP16.44■□□□□ 0.22
CTSA-211ENST00000606066 TFRCP02786 760 aaKnown RBP16.44■□□□□ 0.22
CTSA-211ENST00000606066 POLR2MP0CAP2 368 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 PRKAR2AP13861 404 aaKnown RBP16.44■□□□□ 0.22
CTSA-211ENST00000606066 CNTN2Q02246 1040 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 GHRHRQ02643 423 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 SSRP1Q08945 709 aaKnown RBP16.44■□□□□ 0.22
CTSA-211ENST00000606066 PWP2Q15269 919 aaKnown RBP16.44■□□□□ 0.22
CTSA-211ENST00000606066 ME3Q16798 604 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 PFKFB3Q16875 520 aaPredicted RBP16.44■□□□□ 0.22
CTSA-211ENST00000606066 MAMDC4Q6UXC1 1216 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 SLC30A10Q6XR72 485 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 DNERQ8NFT8 737 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 CUL5Q93034 780 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 SLC26A6Q9BXS9 759 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 HMX1Q9NP08 348 aaPredicted RBP16.44■□□□□ 0.22
CTSA-211ENST00000606066 NRBP1Q9UHY1 535 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 CNPY2Q9Y2B0 182 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 RPTORQ8N122 1335 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 SYNGAP1Q96PV0 1343 aa16.44■□□□□ 0.22
CTSA-211ENST00000606066 SOWAHBA6NEL2 793 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 IGHA2P01877 340 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 SCG2P13521 617 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 CYP2C19P33261 490 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 MCM2P49736 904 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 HSD17B4P51659 736 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 CACNB2Q08289 660 aaPredicted RBP16.43■□□□□ 0.22
CTSA-211ENST00000606066 MAP3K21Q5TCX8 1036 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 PPP1R18Q6NYC8 613 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 TEX2Q8IWB9 1127 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 SYTL5Q8TDW5 730 aaPredicted RBP16.43■□□□□ 0.22
CTSA-211ENST00000606066 CCDC12Q8WUD4 166 aaPredicted RBP16.43■□□□□ 0.22
CTSA-211ENST00000606066 PHKBQ93100 1093 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 GTF3C6Q969F1 213 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 BARHL2Q9NY43 387 aa16.43■□□□□ 0.22
CTSA-211ENST00000606066 OPLAHO14841 1288 aa16.42■□□□□ 0.22
CTSA-211ENST00000606066 EVI5O60447 810 aa16.42■□□□□ 0.22
CTSA-211ENST00000606066 NAPAP54920 295 aa16.42■□□□□ 0.22
CTSA-211ENST00000606066 TRIM32Q13049 653 aa16.42■□□□□ 0.22
CTSA-211ENST00000606066 WWC2Q6AWC2 1192 aa16.42■□□□□ 0.22
CTSA-211ENST00000606066 TBC1D5Q92609 795 aa16.42■□□□□ 0.22
CTSA-211ENST00000606066 DEFB118Q96PH6 123 aa16.42■□□□□ 0.22
CTSA-211ENST00000606066 GLT8D2Q9H1C3 349 aa16.42■□□□□ 0.22
CTSA-211ENST00000606066 PSTPIP2Q9H939 334 aa16.42■□□□□ 0.22
CTSA-211ENST00000606066 SH2B1Q9NRF2 756 aaPredicted RBP16.42■□□□□ 0.22
CTSA-211ENST00000606066 PLXNB2O15031 1838 aa16.42■□□□□ 0.22
CTSA-211ENST00000606066 PIK3CDO00329 1044 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms