RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 PIBF1Q8WXW3 757 aa16.47■□□□□ 0.23
TUBE1-211ENST00000605457 PURBQ96QR8 312 aaKnown RBP16.47■□□□□ 0.23
TUBE1-211ENST00000605457 NRBP1Q9UHY1 535 aa16.47■□□□□ 0.23
TUBE1-211ENST00000605457 NAP1L2Q9ULW6 460 aaPredicted RBP16.47■□□□□ 0.23
TUBE1-211ENST00000605457 SGPL1O95470 568 aa16.46■□□□□ 0.23
TUBE1-211ENST00000605457 RGS19P49795 217 aa16.46■□□□□ 0.23
TUBE1-211ENST00000605457 METAP2P50579 478 aaKnown RBP eCLIP16.46■□□□□ 0.23
TUBE1-211ENST00000605457 FUT2Q10981 343 aa16.46■□□□□ 0.23
TUBE1-211ENST00000605457 TRAF1Q13077 416 aa16.46■□□□□ 0.23
TUBE1-211ENST00000605457 PPP2R5BQ15173 497 aa16.46■□□□□ 0.23
TUBE1-211ENST00000605457 PRAMEF19Q5SWL8 479 aa16.46■□□□□ 0.23
TUBE1-211ENST00000605457 PDRG1Q9NUG6 133 aa16.46■□□□□ 0.23
TUBE1-211ENST00000605457 SEC63Q9UGP8 760 aaKnown RBP16.46■□□□□ 0.23
TUBE1-211ENST00000605457 SNAI1O95863 264 aaPredicted RBP16.45■□□□□ 0.22
TUBE1-211ENST00000605457 CALML3P27482 149 aa16.45■□□□□ 0.22
TUBE1-211ENST00000605457 GHRHRQ02643 423 aa16.45■□□□□ 0.22
TUBE1-211ENST00000605457 ARMCX2Q7L311 632 aa16.45■□□□□ 0.22
TUBE1-211ENST00000605457 CCDC82Q8N4S0 544 aa16.45■□□□□ 0.22
TUBE1-211ENST00000605457 TBC1D5Q92609 795 aa16.45■□□□□ 0.22
TUBE1-211ENST00000605457 CRISPLD2Q9H0B8 497 aa16.45■□□□□ 0.22
TUBE1-211ENST00000605457 MCF2L2Q86YR7 1114 aa16.45■□□□□ 0.22
TUBE1-211ENST00000605457 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.45■□□□□ 0.22
TUBE1-211ENST00000605457 ADD3Q9UEY8 706 aaKnown RBP16.45■□□□□ 0.22
TUBE1-211ENST00000605457 CNPY2Q9Y2B0 182 aa16.45■□□□□ 0.22
TUBE1-211ENST00000605457 CCDC196A0A1B0GTZ2 297 aa16.44■□□□□ 0.22
TUBE1-211ENST00000605457 ASB14A6NK59 587 aa16.44■□□□□ 0.22
TUBE1-211ENST00000605457 SEPT4O43236 478 aa16.44■□□□□ 0.22
TUBE1-211ENST00000605457 ZNF865P0CJ78 1059 aaPredicted RBP16.44■□□□□ 0.22
TUBE1-211ENST00000605457 CNGA1P29973 690 aa16.44■□□□□ 0.22
TUBE1-211ENST00000605457 PDIA3P30101 505 aaKnown RBP16.44■□□□□ 0.22
TUBE1-211ENST00000605457 ADD1P35611 737 aaKnown RBP16.44■□□□□ 0.22
TUBE1-211ENST00000605457 ALDH5A1P51649 535 aaPredicted RBP16.44■□□□□ 0.22
TUBE1-211ENST00000605457 HSD17B4P51659 736 aa16.44■□□□□ 0.22
TUBE1-211ENST00000605457 LHX8Q68G74 356 aa16.44■□□□□ 0.22
TUBE1-211ENST00000605457 KATNBL1Q9H079 304 aa16.44■□□□□ 0.22
TUBE1-211ENST00000605457 ALDH8A1Q9H2A2 487 aaPredicted RBP16.44■□□□□ 0.22
TUBE1-211ENST00000605457 COL20A1Q9P218 1284 aa16.44■□□□□ 0.22
TUBE1-211ENST00000605457 DDX20Q9UHI6 824 aaKnown RBP16.44■□□□□ 0.22
TUBE1-211ENST00000605457 DDX49Q9Y6V7 483 aaKnown RBP16.44■□□□□ 0.22
TUBE1-211ENST00000605457 LOC102724159A0A0B4J2E5 919 aa16.43■□□□□ 0.22
TUBE1-211ENST00000605457 hCG_1642624A0A1W2PR95 340 aa16.43■□□□□ 0.22
TUBE1-211ENST00000605457 MSCO60682 206 aa16.43■□□□□ 0.22
TUBE1-211ENST00000605457 CFBP00751 764 aa16.43■□□□□ 0.22
TUBE1-211ENST00000605457 CAPN2P17655 700 aa16.43■□□□□ 0.22
TUBE1-211ENST00000605457 PWP2Q15269 919 aaKnown RBP16.43■□□□□ 0.22
TUBE1-211ENST00000605457 DNERQ8NFT8 737 aa16.43■□□□□ 0.22
TUBE1-211ENST00000605457 SYTL5Q8TDW5 730 aaPredicted RBP16.43■□□□□ 0.22
TUBE1-211ENST00000605457 MORC4Q8TE76 937 aa16.43■□□□□ 0.22
TUBE1-211ENST00000605457 ABHD16BQ9H3Z7 469 aa16.43■□□□□ 0.22
TUBE1-211ENST00000605457 OGDHLQ9ULD0 1010 aa16.43■□□□□ 0.22
TUBE1-211ENST00000605457 ZNF274Q96GC6 653 aaPredicted RBP16.42■□□□□ 0.22
TUBE1-211ENST00000605457 LARP6Q9BRS8 491 aaKnown RBP16.42■□□□□ 0.22
TUBE1-211ENST00000605457 MAP3K20Q9NYL2 800 aaKnown RBP16.42■□□□□ 0.22
TUBE1-211ENST00000605457 ALPK3Q96L96 1907 aa16.42■□□□□ 0.22
TUBE1-211ENST00000605457 EDNRBP24530 442 aa16.41■□□□□ 0.22
TUBE1-211ENST00000605457 RBM25P49756 843 aaKnown RBP16.41■□□□□ 0.22
TUBE1-211ENST00000605457 AK2P54819 239 aa16.41■□□□□ 0.22
TUBE1-211ENST00000605457 ACVR2BQ13705 512 aa16.41■□□□□ 0.22
TUBE1-211ENST00000605457 SAMD3Q8N6K7 520 aa16.41■□□□□ 0.22
TUBE1-211ENST00000605457 C22orf23Q9BZE7 217 aa16.41■□□□□ 0.22
TUBE1-211ENST00000605457 NCOA5Q9HCD5 579 aaKnown RBP16.41■□□□□ 0.22
TUBE1-211ENST00000605457 ZHX1Q9UKY1 873 aaPredicted RBP16.41■□□□□ 0.22
TUBE1-211ENST00000605457 CEP290O15078 2479 aa16.41■□□□□ 0.22
TUBE1-211ENST00000605457 TFRCP02786 760 aaKnown RBP16.41■□□□□ 0.22
TUBE1-211ENST00000605457 AKR1A1P14550 325 aa16.41■□□□□ 0.22
TUBE1-211ENST00000605457 CCT2P78371 535 aaKnown RBP16.41■□□□□ 0.22
TUBE1-211ENST00000605457 NTRK3Q16288 839 aa16.41■□□□□ 0.22
TUBE1-211ENST00000605457 UBE2Q1Q7Z7E8 422 aa16.41■□□□□ 0.22
TUBE1-211ENST00000605457 GPKOWQ92917 476 aaPredicted RBP eCLIP16.41■□□□□ 0.226e-6■■□□□ 12
TUBE1-211ENST00000605457 KIF2CQ99661 725 aa16.41■□□□□ 0.22
TUBE1-211ENST00000605457 V9GY48 417 aaPredicted RBP16.41■□□□□ 0.22
TUBE1-211ENST00000605457 HOXA13P31271 388 aaPredicted RBP16.4■□□□□ 0.22
TUBE1-211ENST00000605457 NEK4P51957 841 aa16.4■□□□□ 0.22
TUBE1-211ENST00000605457 ANKRD1Q15327 319 aa16.4■□□□□ 0.22
TUBE1-211ENST00000605457 ANO1Q5XXA6 986 aa16.4■□□□□ 0.22
TUBE1-211ENST00000605457 WWC2Q6AWC2 1192 aa16.4■□□□□ 0.22
TUBE1-211ENST00000605457 HEATR3Q7Z4Q2 680 aa16.4■□□□□ 0.22
TUBE1-211ENST00000605457 ANKLE1Q8NAG6 615 aa16.4■□□□□ 0.22
TUBE1-211ENST00000605457 TAAR1Q96RJ0 339 aa16.4■□□□□ 0.22
TUBE1-211ENST00000605457 RMDN3Q96TC7 470 aa16.4■□□□□ 0.22
TUBE1-211ENST00000605457 TPCN1Q9ULQ1 816 aa16.4■□□□□ 0.22
TUBE1-211ENST00000605457 MYH7BA7E2Y1 1941 aa16.39■□□□□ 0.21
TUBE1-211ENST00000605457 GCOM1H8Y6P7 765 aaPredicted RBP16.39■□□□□ 0.21
TUBE1-211ENST00000605457 ADCY6O43306 1168 aa16.39■□□□□ 0.21
TUBE1-211ENST00000605457 FARP2O94887 1054 aaPredicted RBP16.39■□□□□ 0.21
TUBE1-211ENST00000605457 POLR2MP0CAP2 368 aa16.39■□□□□ 0.21
TUBE1-211ENST00000605457 IFNAR1P17181 557 aa16.39■□□□□ 0.21
TUBE1-211ENST00000605457 MNX1P50219 401 aaPredicted RBP16.39■□□□□ 0.21
TUBE1-211ENST00000605457 CCDC144BQ3MJ40 725 aa16.39■□□□□ 0.21
TUBE1-211ENST00000605457 FBXO16Q8IX29 292 aaPredicted RBP16.39■□□□□ 0.21
TUBE1-211ENST00000605457 NSUN6Q8TEA1 469 aaKnown RBP16.39■□□□□ 0.21
TUBE1-211ENST00000605457 MPHOSPH6Q99547 160 aaKnown RBP16.39■□□□□ 0.21
TUBE1-211ENST00000605457 VTA1Q9NP79 307 aa16.39■□□□□ 0.21
TUBE1-211ENST00000605457 hCG_1984214I3L0E3 225 aa16.38■□□□□ 0.21
TUBE1-211ENST00000605457 PIK3CDO00329 1044 aa16.38■□□□□ 0.21
TUBE1-211ENST00000605457 STK3Q13188 491 aa16.38■□□□□ 0.21
TUBE1-211ENST00000605457 TYW1BQ6NUM6 668 aa16.38■□□□□ 0.21
TUBE1-211ENST00000605457 EEPD1Q7L9B9 569 aa16.38■□□□□ 0.21
TUBE1-211ENST00000605457 ZNF713Q8N859 430 aaPredicted RBP16.38■□□□□ 0.21
TUBE1-211ENST00000605457 PHKBQ93100 1093 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms