RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 SALL3Q9BXA9 1300 aa19.94■□□□□ 0.78
CCDC12-210ENST00000604181 ICAM1P05362 532 aa19.93■□□□□ 0.78
CCDC12-210ENST00000604181 CYP2C9P11712 490 aa19.93■□□□□ 0.78
CCDC12-210ENST00000604181 TTLL4Q14679 1199 aa19.93■□□□□ 0.78
CCDC12-210ENST00000604181 CCDC96Q2M329 555 aa19.93■□□□□ 0.78
CCDC12-210ENST00000604181 LRRFIP1Q32MZ4 808 aaKnown RBP19.93■□□□□ 0.78
CCDC12-210ENST00000604181 ATXN2LQ8WWM7 1075 aaKnown RBP19.93■□□□□ 0.78
CCDC12-210ENST00000604181 ASB2Q96Q27 587 aa19.93■□□□□ 0.78
CCDC12-210ENST00000604181 VTA1Q9NP79 307 aa19.93■□□□□ 0.78
CCDC12-210ENST00000604181 Q9Y3F1 56 aa19.93■□□□□ 0.78
CCDC12-210ENST00000604181 TET1Q8NFU7 2136 aa19.93■□□□□ 0.78
CCDC12-210ENST00000604181 TCF20Q9UGU0 1960 aaKnown RBP19.92■□□□□ 0.78
CCDC12-210ENST00000604181 SCN10AQ9Y5Y9 1956 aa19.92■□□□□ 0.78
CCDC12-210ENST00000604181 RBAK-RBAKDNI3L0D1 243 aa19.92■□□□□ 0.78
CCDC12-210ENST00000604181 ERC2O15083 957 aa19.92■□□□□ 0.78
CCDC12-210ENST00000604181 ZEB2O60315 1214 aa19.92■□□□□ 0.78
CCDC12-210ENST00000604181 RANBP6O60518 1105 aaKnown RBP19.92■□□□□ 0.78
CCDC12-210ENST00000604181 ALDH5A1P51649 535 aaPredicted RBP19.92■□□□□ 0.78
CCDC12-210ENST00000604181 DUSP28Q4G0W2 176 aa19.92■□□□□ 0.78
CCDC12-210ENST00000604181 SLC30A10Q6XR72 485 aa19.92■□□□□ 0.78
CCDC12-210ENST00000604181 SLC28A3Q9HAS3 691 aa19.92■□□□□ 0.78
CCDC12-210ENST00000604181 ANAPC4Q9UJX5 808 aa19.92■□□□□ 0.78
CCDC12-210ENST00000604181 PURAQ00577 322 aaKnown RBP19.91■□□□□ 0.78
CCDC12-210ENST00000604181 BTNL9Q6UXG8 535 aa19.91■□□□□ 0.78
CCDC12-210ENST00000604181 ADAMTS19Q8TE59 1207 aa19.91■□□□□ 0.78
CCDC12-210ENST00000604181 CLEC4DQ8WXI8 215 aa19.91■□□□□ 0.78
CCDC12-210ENST00000604181 WDR11Q9BZH6 1224 aa19.91■□□□□ 0.78
CCDC12-210ENST00000604181 FRMPD2Q68DX3 1309 aaPredicted RBP19.91■□□□□ 0.78
CCDC12-210ENST00000604181 ORC4O43929 436 aa19.9■□□□□ 0.78
CCDC12-210ENST00000604181 FGRP09769 529 aa19.9■□□□□ 0.78
CCDC12-210ENST00000604181 MX1P20591 662 aa19.9■□□□□ 0.78
CCDC12-210ENST00000604181 SYDE2Q5VT97 1194 aa19.9■□□□□ 0.78
CCDC12-210ENST00000604181 DCAF4Q8WV16 495 aa19.9■□□□□ 0.78
CCDC12-210ENST00000604181 MTIF3Q9H2K0 278 aaKnown RBP19.9■□□□□ 0.78
CCDC12-210ENST00000604181 GPCPD1Q9NPB8 672 aa19.9■□□□□ 0.78
CCDC12-210ENST00000604181 SLC4A7Q9Y6M7 1214 aa19.9■□□□□ 0.78
CCDC12-210ENST00000604181 RBM47A0AV96 593 aaKnown RBP19.89■□□□□ 0.77
CCDC12-210ENST00000604181 ZBBXA8MT70 800 aa19.89■□□□□ 0.77
CCDC12-210ENST00000604181 RFXAPO00287 272 aa19.89■□□□□ 0.77
CCDC12-210ENST00000604181 ARHGEF15O94989 841 aa19.89■□□□□ 0.77
CCDC12-210ENST00000604181 TNKSO95271 1327 aa19.89■□□□□ 0.77
CCDC12-210ENST00000604181 COL9A1P20849 921 aa19.89■□□□□ 0.77
CCDC12-210ENST00000604181 MRPS5P82675 430 aaKnown RBP19.89■□□□□ 0.77
CCDC12-210ENST00000604181 PPP4R3BQ5MIZ7 849 aa19.89■□□□□ 0.77
CCDC12-210ENST00000604181 PPP2R2DQ66LE6 453 aa19.89■□□□□ 0.77
CCDC12-210ENST00000604181 DEFB128Q7Z7B8 93 aa19.89■□□□□ 0.77
CCDC12-210ENST00000604181 COPS5Q92905 334 aa19.89■□□□□ 0.77
CCDC12-210ENST00000604181 NECAB3Q96P71 396 aaPredicted RBP19.89■□□□□ 0.77
CCDC12-210ENST00000604181 TMEM47Q9BQJ4 181 aa19.89■□□□□ 0.77
CCDC12-210ENST00000604181 EPOPA6NHQ4 379 aa19.88■□□□□ 0.77
CCDC12-210ENST00000604181 MYL3P08590 195 aa19.88■□□□□ 0.77
CCDC12-210ENST00000604181 ATP2A2P16615 1042 aaKnown RBP19.88■□□□□ 0.77
CCDC12-210ENST00000604181 RPUSD2Q8IZ73 545 aaKnown RBP19.88■□□□□ 0.77
CCDC12-210ENST00000604181 MICALL1Q8N3F8 863 aa19.88■□□□□ 0.77
CCDC12-210ENST00000604181 FAM227BQ96M60 508 aa19.88■□□□□ 0.77
CCDC12-210ENST00000604181 SEZ6LQ9BYH1 1024 aa19.88■□□□□ 0.77
CCDC12-210ENST00000604181 PCDHA11Q9Y5I1 949 aa19.88■□□□□ 0.77
CCDC12-210ENST00000604181 PTPDC1A2A3K4 754 aa19.87■□□□□ 0.77
CCDC12-210ENST00000604181 FGAP02671 866 aa19.87■□□□□ 0.77
CCDC12-210ENST00000604181 CALML3P27482 149 aa19.87■□□□□ 0.77
CCDC12-210ENST00000604181 TFF2Q03403 129 aa19.87■□□□□ 0.77
CCDC12-210ENST00000604181 ALX1Q15699 326 aa19.87■□□□□ 0.77
CCDC12-210ENST00000604181 NBPF20Q3BBV1 942 aa19.87■□□□□ 0.77
CCDC12-210ENST00000604181 RRP12Q5JTH9 1297 aaKnown RBP19.87■□□□□ 0.77
CCDC12-210ENST00000604181 OR6J1Q8NGC5 347 aa19.87■□□□□ 0.77
CCDC12-210ENST00000604181 UHRF1Q96T88 793 aaPredicted RBP19.87■□□□□ 0.77
CCDC12-210ENST00000604181 POLR3EQ9NVU0 708 aa19.87■□□□□ 0.77
CCDC12-210ENST00000604181 BRWD1Q9NSI6 2320 aa19.87■□□□□ 0.77
CCDC12-210ENST00000604181 A0A0D9SFI3 127 aa19.86■□□□□ 0.77
CCDC12-210ENST00000604181 PDHBP11177 359 aa19.86■□□□□ 0.77
CCDC12-210ENST00000604181 TOP1P11387 765 aaKnown RBP19.86■□□□□ 0.77
CCDC12-210ENST00000604181 KRT40Q6A162 431 aa19.86■□□□□ 0.77
CCDC12-210ENST00000604181 CERS4Q9HA82 394 aa19.86■□□□□ 0.77
CCDC12-210ENST00000604181 TOMM22Q9NS69 142 aa19.86■□□□□ 0.77
CCDC12-210ENST00000604181 ADD3Q9UEY8 706 aaKnown RBP19.86■□□□□ 0.77
CCDC12-210ENST00000604181 TRIP12Q14669 1992 aaPredicted RBP19.86■□□□□ 0.77
CCDC12-210ENST00000604181 ARIH2O95376 493 aa19.85■□□□□ 0.77
CCDC12-210ENST00000604181 CA3P07451 260 aa19.85■□□□□ 0.77
CCDC12-210ENST00000604181 EDNRBP24530 442 aa19.85■□□□□ 0.77
CCDC12-210ENST00000604181 RPS6P62753 249 aaKnown RBP19.85■□□□□ 0.77
CCDC12-210ENST00000604181 FAM47CQ5HY64 1035 aa19.85■□□□□ 0.77
CCDC12-210ENST00000604181 SPRED2Q7Z698 418 aa19.85■□□□□ 0.77
CCDC12-210ENST00000604181 ZNF589Q86UQ0 364 aaPredicted RBP19.85■□□□□ 0.77
CCDC12-210ENST00000604181 MTG1Q9BT17 334 aaPredicted RBP19.85■□□□□ 0.77
CCDC12-210ENST00000604181 PTPRSQ13332 1948 aa19.84■□□□□ 0.77
CCDC12-210ENST00000604181 TANC1Q9C0D5 1861 aa19.84■□□□□ 0.77
CCDC12-210ENST00000604181 CPT1AP50416 773 aa19.84■□□□□ 0.77
CCDC12-210ENST00000604181 HAND2P61296 217 aa19.84■□□□□ 0.77
CCDC12-210ENST00000604181 RNF207Q6ZRF8 634 aa19.84■□□□□ 0.77
CCDC12-210ENST00000604181 CPVLQ9H3G5 476 aa19.84■□□□□ 0.77
CCDC12-210ENST00000604181 TCP11L1Q9NUJ3 509 aa19.84■□□□□ 0.77
CCDC12-210ENST00000604181 SUPT20HL2P0C7V6 817 aa19.83■□□□□ 0.77
CCDC12-210ENST00000604181 BMP1P13497 986 aa19.83■□□□□ 0.77
CCDC12-210ENST00000604181 KCNQ1P51787 676 aa19.83■□□□□ 0.77
CCDC12-210ENST00000604181 ZNF543Q08ER8 600 aa19.83■□□□□ 0.77
CCDC12-210ENST00000604181 PPP2R5BQ15173 497 aa19.83■□□□□ 0.77
CCDC12-210ENST00000604181 TBC1D10CQ8IV04 446 aa19.83■□□□□ 0.77
CCDC12-210ENST00000604181 EVI5LQ96CN4 794 aa19.83■□□□□ 0.77
CCDC12-210ENST00000604181 CTAGE1Q96RT6 745 aa19.83■□□□□ 0.77
CCDC12-210ENST00000604181 HELLSQ9NRZ9 838 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms