RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 LCTP09848 1927 aa21.19■□□□□ 0.98
CHMP2A-208ENST00000601220 TRIM6-TRIM34B2RNG4 842 aa21.18■□□□□ 0.98
CHMP2A-208ENST00000601220 IGHDP01880 384 aa21.18■□□□□ 0.98
CHMP2A-208ENST00000601220 PSMC6P62333 389 aa21.18■□□□□ 0.98
CHMP2A-208ENST00000601220 SLC30A10Q6XR72 485 aa21.18■□□□□ 0.98
CHMP2A-208ENST00000601220 MFSD6Q6ZSS7 791 aa21.18■□□□□ 0.98
CHMP2A-208ENST00000601220 SEZ6LQ9BYH1 1024 aa21.18■□□□□ 0.98
CHMP2A-208ENST00000601220 ADD3Q9UEY8 706 aaKnown RBP21.18■□□□□ 0.98
CHMP2A-208ENST00000601220 UMODL1Q5DID0 1318 aa21.18■□□□□ 0.98
CHMP2A-208ENST00000601220 SPTBN5Q9NRC6 3674 aaKnown RBP21.17■□□□□ 0.98
CHMP2A-208ENST00000601220 GRXCR1A8MXD5 290 aa21.17■□□□□ 0.98
CHMP2A-208ENST00000601220 ZEB2O60315 1214 aa21.17■□□□□ 0.98
CHMP2A-208ENST00000601220 PBX2P40425 430 aa21.17■□□□□ 0.98
CHMP2A-208ENST00000601220 RILPL2Q969X0 211 aa21.17■□□□□ 0.98
CHMP2A-208ENST00000601220 VWCEQ96DN2 955 aa21.17■□□□□ 0.98
CHMP2A-208ENST00000601220 PBX4Q9BYU1 374 aa21.17■□□□□ 0.98
CHMP2A-208ENST00000601220 TRPV6Q9H1D0 765 aa21.17■□□□□ 0.98
CHMP2A-208ENST00000601220 IL23AQ9NPF7 189 aa21.17■□□□□ 0.98
CHMP2A-208ENST00000601220 VCANP13611 3396 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 NEDD4P46934 1319 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 WDR19Q8NEZ3 1342 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 B4GALT4O60513 344 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 FOSL2P15408 326 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 EDNRBP24530 442 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 NUCB1Q02818 461 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 B4GALNT3Q6L9W6 998 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 PSRC1Q6PGN9 363 aaPredicted RBP21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 CHD1LQ86WJ1 897 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 HERVK_113Q902F9 699 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 TIFAQ96CG3 184 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 NOC4LQ9BVI4 516 aaKnown RBP21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 WDR11Q9BZH6 1224 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 HIPK3Q9H422 1215 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 RWDD1Q9H446 243 aaPredicted RBP21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 ZNF576Q9H609 170 aa21.16■□□□□ 0.98
CHMP2A-208ENST00000601220 PTPDC1A2A3K4 754 aa21.15■□□□□ 0.98
CHMP2A-208ENST00000601220 RPS6P62753 249 aaKnown RBP21.15■□□□□ 0.98
CHMP2A-208ENST00000601220 RNF207Q6ZRF8 634 aa21.15■□□□□ 0.98
CHMP2A-208ENST00000601220 DGKHQ86XP1 1220 aa21.15■□□□□ 0.98
CHMP2A-208ENST00000601220 CXXC1Q9P0U4 656 aaPredicted RBP21.15■□□□□ 0.98
CHMP2A-208ENST00000601220 CALML3P27482 149 aa21.14■□□□□ 0.97
CHMP2A-208ENST00000601220 ANKS1AQ92625 1134 aa21.14■□□□□ 0.97
CHMP2A-208ENST00000601220 ESR2Q92731 530 aa21.14■□□□□ 0.97
CHMP2A-208ENST00000601220 ZKSCAN3Q9BRR0 538 aa21.14■□□□□ 0.97
CHMP2A-208ENST00000601220 WNT8AQ9H1J5 351 aa21.14■□□□□ 0.97
CHMP2A-208ENST00000601220 ALDH8A1Q9H2A2 487 aaPredicted RBP21.14■□□□□ 0.97
CHMP2A-208ENST00000601220 RNF41Q9H4P4 317 aaPredicted RBP21.14■□□□□ 0.97
CHMP2A-208ENST00000601220 PNMA2Q9UL42 364 aa21.14■□□□□ 0.97
CHMP2A-208ENST00000601220 GOLGA8HP0CJ92 632 aa21.13■□□□□ 0.97
CHMP2A-208ENST00000601220 PURAQ00577 322 aaKnown RBP21.13■□□□□ 0.97
CHMP2A-208ENST00000601220 RGS22Q8NE09 1264 aa21.13■□□□□ 0.97
CHMP2A-208ENST00000601220 CPVLQ9H3G5 476 aa21.13■□□□□ 0.97
CHMP2A-208ENST00000601220 ZNF213O14771 459 aa21.12■□□□□ 0.97
CHMP2A-208ENST00000601220 FGBP02675 491 aa21.12■□□□□ 0.97
CHMP2A-208ENST00000601220 MFAP1P55081 439 aaKnown RBP21.12■□□□□ 0.97
CHMP2A-208ENST00000601220 CCL23P55773 120 aa21.12■□□□□ 0.97
CHMP2A-208ENST00000601220 GPATCH4Q5T3I0 446 aaKnown RBP21.12■□□□□ 0.97
CHMP2A-208ENST00000601220 DNERQ8NFT8 737 aa21.12■□□□□ 0.97
CHMP2A-208ENST00000601220 UBA5Q9GZZ9 404 aa21.12■□□□□ 0.97
CHMP2A-208ENST00000601220 NT5C2P49902 561 aa21.11■□□□□ 0.97
CHMP2A-208ENST00000601220 CWC27Q6UX04 472 aaKnown RBP21.11■□□□□ 0.97
CHMP2A-208ENST00000601220 USP38Q8NB14 1042 aa21.11■□□□□ 0.97
CHMP2A-208ENST00000601220 TBC1D5Q92609 795 aa21.11■□□□□ 0.97
CHMP2A-208ENST00000601220 TRMT13Q9NUP7 481 aaKnown RBP21.11■□□□□ 0.97
CHMP2A-208ENST00000601220 POLR3EQ9NVU0 708 aa21.11■□□□□ 0.97
CHMP2A-208ENST00000601220 PRUNE2Q8WUY3 3088 aa21.1■□□□□ 0.97
CHMP2A-208ENST00000601220 KDM4AO75164 1064 aa21.1■□□□□ 0.97
CHMP2A-208ENST00000601220 EXOC6Q8TAG9 804 aa21.1■□□□□ 0.97
CHMP2A-208ENST00000601220 COPS5Q92905 334 aa21.1■□□□□ 0.97
CHMP2A-208ENST00000601220 A6NJR5 290 aa21.09■□□□□ 0.97
CHMP2A-208ENST00000601220 NKRFO15226 690 aaKnown RBP eCLIP21.09■□□□□ 0.97
CHMP2A-208ENST00000601220 CPT1AP50416 773 aa21.09■□□□□ 0.97
CHMP2A-208ENST00000601220 PDE4DQ08499 809 aa21.09■□□□□ 0.97
CHMP2A-208ENST00000601220 OTOP2Q7RTS6 562 aa21.09■□□□□ 0.97
CHMP2A-208ENST00000601220 PNMA1Q8ND90 353 aa21.09■□□□□ 0.97
CHMP2A-208ENST00000601220 OR6J1Q8NGC5 347 aa21.09■□□□□ 0.97
CHMP2A-208ENST00000601220 MTG1Q9BT17 334 aaPredicted RBP21.09■□□□□ 0.97
CHMP2A-208ENST00000601220 DSCC1Q9BVC3 393 aa21.09■□□□□ 0.97
CHMP2A-208ENST00000601220 MAF1Q9H063 256 aa21.09■□□□□ 0.97
CHMP2A-208ENST00000601220 ZSWIM5Q9P217 1185 aa21.09■□□□□ 0.97
CHMP2A-208ENST00000601220 ARIH2O95376 493 aa21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 MYL3P08590 195 aa21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 CYP2C9P11712 490 aa21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 NBPF20Q3BBV1 942 aa21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 USH1GQ495M9 461 aa21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 CCDC178Q5BJE1 867 aa21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 ADGRF4Q8IZF3 695 aa21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 ENAHQ8N8S7 591 aaPredicted RBP21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 SCFD2Q8WU76 684 aa21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 SCLYQ96I15 445 aa21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 ZSCAN10Q96SZ4 725 aaPredicted RBP21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 IL25Q9H293 177 aa21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 YBX2Q9Y2T7 364 aaKnown RBP21.08■□□□□ 0.97
CHMP2A-208ENST00000601220 CHD9Q3L8U1 2897 aa21.08■□□□□ 0.96
CHMP2A-208ENST00000601220 TNKSO95271 1327 aa21.07■□□□□ 0.96
CHMP2A-208ENST00000601220 B4E1Z4 1266 aa21.07■□□□□ 0.96
CHMP2A-208ENST00000601220 SUPT20HL2P0C7V6 817 aa21.07■□□□□ 0.96
CHMP2A-208ENST00000601220 ADGRE1Q14246 886 aa21.07■□□□□ 0.96
CHMP2A-208ENST00000601220 PPP2R5BQ15173 497 aa21.07■□□□□ 0.96
CHMP2A-208ENST00000601220 RAB30Q15771 203 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms