RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 CYP2B6P20813 491 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 COPB2P35606 906 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 STAT3P40763 770 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 SLC1A4P43007 532 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 GJA8P48165 433 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 STAT2P52630 851 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 OAZ1P54368 228 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 TRIM32Q13049 653 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 PKN1Q16512 942 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 GALNT17Q6IS24 598 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 RAB11FIP4Q86YS3 637 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 CCDC144CPQ8IYA2 1237 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 SRBD1Q8N5C6 995 aaKnown RBP13.23□□□□□ -0.29
ZNF548-211ENST00000600927 ZNF713Q8N859 430 aaPredicted RBP13.23□□□□□ -0.29
ZNF548-211ENST00000600927 DCAF4Q8WV16 495 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 SPATA32Q96LK8 384 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 TEX13BQ9BXU2 312 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 POLR3EQ9NVU0 708 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
ZNF548-211ENST00000600927 ZNF536O15090 1300 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 TMEM232C9JQI7 657 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 FDX1P10109 184 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 PDHBP11177 359 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 ADORA2AP29274 412 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 CCL14Q16627 93 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 PFKFB3Q16875 520 aaPredicted RBP13.22□□□□□ -0.29
ZNF548-211ENST00000600927 ASPRV1Q53RT3 343 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 GPATCH4Q5T3I0 446 aaKnown RBP13.22□□□□□ -0.29
ZNF548-211ENST00000600927 MYSM1Q5VVJ2 828 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 BTNL9Q6UXG8 535 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 UBE2Q1Q7Z7E8 422 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 FAM160B2Q86V87 743 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 CCAR1Q8IX12 1150 aaKnown RBP13.22□□□□□ -0.29
ZNF548-211ENST00000600927 NPLOC4Q8TAT6 608 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 LEO1Q8WVC0 666 aaPredicted RBP13.22□□□□□ -0.29
ZNF548-211ENST00000600927 CRISPLD2Q9H0B8 497 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 RNF208Q9H0X6 261 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 BRMS1Q9HCU9 246 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 FLRT1Q9NZU1 646 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 IVNS1ABPQ9Y6Y0 642 aa13.22□□□□□ -0.29
ZNF548-211ENST00000600927 V9GY48 417 aaPredicted RBP13.22□□□□□ -0.29
ZNF548-211ENST00000600927 RPTORQ8N122 1335 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 CNTNAP5Q8WYK1 1306 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 COBLO75128 1261 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 MYCP01106 439 aaPredicted RBP13.21□□□□□ -0.29
ZNF548-211ENST00000600927 PARP1P09874 1014 aaKnown RBP13.21□□□□□ -0.29
ZNF548-211ENST00000600927 SCG2P13521 617 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 CAPN2P17655 700 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 CALML3P27482 149 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 NASPP49321 788 aaPredicted RBP13.21□□□□□ -0.29
ZNF548-211ENST00000600927 ZNF445P59923 1031 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 PLS1Q14651 629 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 WDR78Q5VTH9 848 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 OLFML2BQ68BL8 750 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 KCTD1Q719H9 257 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 NCAPG2Q86XI2 1143 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 GPT2Q8TD30 523 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 KCNG4Q8TDN1 519 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 U2AF1L4Q8WU68 220 aaKnown RBP13.21□□□□□ -0.29
ZNF548-211ENST00000600927 KIFC2Q96AC6 838 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 PHF20Q9BVI0 1012 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.21□□□□□ -0.29
ZNF548-211ENST00000600927 BIN2Q9UBW5 565 aaPredicted RBP13.21□□□□□ -0.29
ZNF548-211ENST00000600927 RIPK3Q9Y572 518 aa13.21□□□□□ -0.29
ZNF548-211ENST00000600927 GOLGA6L4A6NEF3 574 aa13.2□□□□□ -0.3
ZNF548-211ENST00000600927 FIBPO43427 364 aa13.2□□□□□ -0.3
ZNF548-211ENST00000600927 PLEKHA8P1O95397 391 aa13.2□□□□□ -0.3
ZNF548-211ENST00000600927 SGPL1O95470 568 aa13.2□□□□□ -0.3
ZNF548-211ENST00000600927 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
ZNF548-211ENST00000600927 CACNB2Q08289 660 aaPredicted RBP13.2□□□□□ -0.3
ZNF548-211ENST00000600927 GNL2Q13823 731 aaKnown RBP13.2□□□□□ -0.3
ZNF548-211ENST00000600927 RILPL1Q5EBL4 403 aa13.2□□□□□ -0.3
ZNF548-211ENST00000600927 SNRNP48Q6IEG0 339 aaKnown RBP13.2□□□□□ -0.3
ZNF548-211ENST00000600927 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
ZNF548-211ENST00000600927 NOSTRINQ8IVI9 506 aa13.2□□□□□ -0.3
ZNF548-211ENST00000600927 CCDC12Q8WUD4 166 aaPredicted RBP13.2□□□□□ -0.3
ZNF548-211ENST00000600927 CHURC1Q8WUH1 139 aa13.2□□□□□ -0.3
ZNF548-211ENST00000600927 RANBP17Q9H2T7 1088 aaKnown RBP13.2□□□□□ -0.3
ZNF548-211ENST00000600927 RIOX1Q9H6W3 641 aa13.2□□□□□ -0.3
ZNF548-211ENST00000600927 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.2□□□□□ -0.3
ZNF548-211ENST00000600927 PRR12Q9ULL5 1215 aa13.2□□□□□ -0.3
ZNF548-211ENST00000600927 TCHHQ07283 1943 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 DNAJC25-GNG10A0A024R161 153 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 KLRF2D3W0D1 207 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 DTNBO60941 627 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 ZBED4O75132 1171 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 BMP15O95972 392 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 FCER1AP12319 257 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 GUCY1B3Q02153 619 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 ZNF543Q08ER8 600 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 ZNF792Q3KQV3 632 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 ADALQ6DHV7 355 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 TTBK2Q6IQ55 1244 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 TEX2Q8IWB9 1127 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 LINC00301Q8NCQ3 95 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 CCDC148Q8NFR7 591 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 AIFM3Q96NN9 605 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 USP28Q96RU2 1077 aa13.19□□□□□ -0.3
ZNF548-211ENST00000600927 RAVER2Q9HCJ3 691 aaKnown RBP13.19□□□□□ -0.3
ZNF548-211ENST00000600927 TFIP11Q9UBB9 837 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms