RNA–Protein interactions for RNA: ENST00000600499.5

LTBP4-228, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-228ENST00000600499 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
LTBP4-228ENST00000600499 TINF2Q9BSI4 451 aa16.88■□□□□ 0.29
LTBP4-228ENST00000600499 NAP1L2Q9ULW6 460 aaPredicted RBP16.88■□□□□ 0.29
LTBP4-228ENST00000600499 V9GY48 417 aaPredicted RBP16.88■□□□□ 0.29
LTBP4-228ENST00000600499 ASTN1O14525 1302 aa16.88■□□□□ 0.29
LTBP4-228ENST00000600499 PIK3CDO00329 1044 aa16.87■□□□□ 0.29
LTBP4-228ENST00000600499 CAPN2P17655 700 aa16.87■□□□□ 0.29
LTBP4-228ENST00000600499 CACNB2Q08289 660 aaPredicted RBP16.87■□□□□ 0.29
LTBP4-228ENST00000600499 TRIM32Q13049 653 aa16.87■□□□□ 0.29
LTBP4-228ENST00000600499 PKN1Q16512 942 aa16.87■□□□□ 0.29
LTBP4-228ENST00000600499 PFKFB3Q16875 520 aaPredicted RBP16.87■□□□□ 0.29
LTBP4-228ENST00000600499 MFSD14CQ5VZR4 134 aa16.87■□□□□ 0.29
LTBP4-228ENST00000600499 SYTL5Q8TDW5 730 aaPredicted RBP16.87■□□□□ 0.29
LTBP4-228ENST00000600499 TBC1D5Q92609 795 aa16.87■□□□□ 0.29
LTBP4-228ENST00000600499 SLKQ9H2G2 1235 aaPredicted RBP16.87■□□□□ 0.29
LTBP4-228ENST00000600499 NCOA5Q9HCD5 579 aaKnown RBP16.87■□□□□ 0.29
LTBP4-228ENST00000600499 PAK6Q9NQU5 681 aaPredicted RBP16.87■□□□□ 0.29
LTBP4-228ENST00000600499 LIMCH1Q9UPQ0 1083 aa16.87■□□□□ 0.29
LTBP4-228ENST00000600499 RPTORQ8N122 1335 aa16.87■□□□□ 0.29
LTBP4-228ENST00000600499 ASB14A6NK59 587 aa16.86■□□□□ 0.29
LTBP4-228ENST00000600499 CYBAP13498 195 aa16.86■□□□□ 0.29
LTBP4-228ENST00000600499 MTFR1Q15390 333 aa16.86■□□□□ 0.29
LTBP4-228ENST00000600499 PPP1R18Q6NYC8 613 aa16.86■□□□□ 0.29
LTBP4-228ENST00000600499 SLC30A10Q6XR72 485 aa16.86■□□□□ 0.29
LTBP4-228ENST00000600499 GTF3C6Q969F1 213 aa16.86■□□□□ 0.29
LTBP4-228ENST00000600499 BARHL2Q9NY43 387 aa16.86■□□□□ 0.29
LTBP4-228ENST00000600499 ADD3Q9UEY8 706 aaKnown RBP16.86■□□□□ 0.29
LTBP4-228ENST00000600499 PTPDC1A2A3K4 754 aa16.85■□□□□ 0.29
LTBP4-228ENST00000600499 LARGE1O95461 756 aa16.85■□□□□ 0.29
LTBP4-228ENST00000600499 SNAI1O95863 264 aaPredicted RBP16.85■□□□□ 0.29
LTBP4-228ENST00000600499 SCG2P13521 617 aa16.85■□□□□ 0.29
LTBP4-228ENST00000600499 PRKAR2AP13861 404 aaKnown RBP16.85■□□□□ 0.29
LTBP4-228ENST00000600499 EDNRBP24530 442 aa16.85■□□□□ 0.29
LTBP4-228ENST00000600499 CYP2C19P33261 490 aa16.85■□□□□ 0.29
LTBP4-228ENST00000600499 WWC2Q6AWC2 1192 aa16.85■□□□□ 0.29
LTBP4-228ENST00000600499 CPLX2Q6PUV4 134 aaKnown RBP16.85■□□□□ 0.29
LTBP4-228ENST00000600499 FAM177A1Q8N128 213 aaPredicted RBP16.85■□□□□ 0.29
LTBP4-228ENST00000600499 PIBF1Q8WXW3 757 aa16.85■□□□□ 0.29
LTBP4-228ENST00000600499 ZSCAN31Q96LW9 406 aaPredicted RBP16.85■□□□□ 0.29
LTBP4-228ENST00000600499 KATNBL1Q9H079 304 aa16.85■□□□□ 0.29
LTBP4-228ENST00000600499 hCG_1642624A0A1W2PR95 340 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 ESYT2A0FGR8 921 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 STXBP3O00186 592 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 MEIS2O14770 477 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 CPLX1O14810 134 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 GJB1P08034 283 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 CCL5P13501 91 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 ALDH5A1P51649 535 aaPredicted RBP16.84■□□□□ 0.29
LTBP4-228ENST00000600499 TYW1BQ6NUM6 668 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 TRPV1Q8NER1 839 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 PHKBQ93100 1093 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 UNC93B1Q9H1C4 597 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 HMX1Q9NP08 348 aaPredicted RBP16.84■□□□□ 0.29
LTBP4-228ENST00000600499 SH2B1Q9NRF2 756 aaPredicted RBP16.84■□□□□ 0.29
LTBP4-228ENST00000600499 COL20A1Q9P218 1284 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 BIN2Q9UBW5 565 aaPredicted RBP16.84■□□□□ 0.29
LTBP4-228ENST00000600499 STK36Q9NRP7 1315 aa16.84■□□□□ 0.29
LTBP4-228ENST00000600499 KIAA0100Q14667 2235 aaKnown RBP16.84■□□□□ 0.29
LTBP4-228ENST00000600499 GCOM1H8Y6P7 765 aaPredicted RBP16.83■□□□□ 0.28
LTBP4-228ENST00000600499 ST18O60284 1047 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 CDKL5O76039 1030 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 CTDNEP1O95476 244 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 CFBP00751 764 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 POLR2MP0CAP2 368 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 ZNF865P0CJ78 1059 aaPredicted RBP16.83■□□□□ 0.28
LTBP4-228ENST00000600499 CALML3P27482 149 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 ST3GAL1Q11201 340 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 STK3Q13188 491 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 FRMPD4Q14CM0 1322 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 ARMCX2Q7L311 632 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 PURBQ96QR8 312 aaKnown RBP16.83■□□□□ 0.28
LTBP4-228ENST00000600499 TAAR1Q96RJ0 339 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 IWS1Q96ST2 819 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 GLT8D2Q9H1C3 349 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 ABHD16BQ9H3Z7 469 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 SH3GLB2Q9NR46 395 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.83■□□□□ 0.28
LTBP4-228ENST00000600499 BRCA2P51587 3418 aa16.83■□□□□ 0.28
LTBP4-228ENST00000600499 MCM3APO60318 1980 aa16.82■□□□□ 0.28
LTBP4-228ENST00000600499 DEXIO95424 95 aa16.82■□□□□ 0.28
LTBP4-228ENST00000600499 MCM2P49736 904 aa16.82■□□□□ 0.28
LTBP4-228ENST00000600499 AKAP17AQ02040 695 aaKnown RBP16.82■□□□□ 0.28
LTBP4-228ENST00000600499 SSRP1Q08945 709 aaKnown RBP16.82■□□□□ 0.28
LTBP4-228ENST00000600499 HEATR3Q7Z4Q2 680 aa16.82■□□□□ 0.28
LTBP4-228ENST00000600499 TRIM22Q8IYM9 498 aa16.82■□□□□ 0.28
LTBP4-228ENST00000600499 NSUN6Q8TEA1 469 aaKnown RBP16.82■□□□□ 0.28
LTBP4-228ENST00000600499 GPKOWQ92917 476 aaPredicted RBP eCLIP16.82■□□□□ 0.28
LTBP4-228ENST00000600499 SLC26A6Q9BXS9 759 aa16.82■□□□□ 0.28
LTBP4-228ENST00000600499 CRISPLD2Q9H0B8 497 aa16.82■□□□□ 0.28
LTBP4-228ENST00000600499 ZMYND12Q9H0C1 365 aa16.82■□□□□ 0.28
LTBP4-228ENST00000600499 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.82■□□□□ 0.284e-7■□□□□ 8.5
LTBP4-228ENST00000600499 PSTPIP2Q9H939 334 aa16.82■□□□□ 0.28
LTBP4-228ENST00000600499 RIC8AQ9NPQ8 531 aa16.82■□□□□ 0.28
LTBP4-228ENST00000600499 B4DLN1 442 aa16.81■□□□□ 0.28
LTBP4-228ENST00000600499 SEPT4O43236 478 aa16.81■□□□□ 0.28
LTBP4-228ENST00000600499 MSCO60682 206 aa16.81■□□□□ 0.28
LTBP4-228ENST00000600499 CCND3P30281 292 aaPredicted RBP16.81■□□□□ 0.28
LTBP4-228ENST00000600499 GJA8P48165 433 aa16.81■□□□□ 0.28
LTBP4-228ENST00000600499 MRPL12P52815 198 aaKnown RBP16.81■□□□□ 0.28
LTBP4-228ENST00000600499 LHX8Q68G74 356 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms