RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 TOGARAM2Q6ZUX3 1019 aa24.29■■□□□ 1.48
GRAMD1A-212ENST00000600231 POTEMA6NI47 508 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 ZSCAN12O43309 604 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 ASIC1P78348 528 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 SEMA3FQ13275 785 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 PPP4R3AQ6IN85 833 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 TRIM65Q6PJ69 517 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 PANX2Q96RD6 677 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 CAMKK2Q96RR4 588 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 STK32BQ9NY57 414 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 PDE4DQ08499 809 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 NCBP1Q09161 790 aaKnown RBP24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 STIM1Q13586 685 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 TMEM266Q2M3C6 531 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 TMEM179Q6ZVK1 233 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 MTERF4Q7Z6M4 381 aaKnown RBP24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 ANKRD20A12PQ8NF67 263 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 DCAF4Q8WV16 495 aa24.28■■□□□ 1.48
GRAMD1A-212ENST00000600231 MYH7BA7E2Y1 1941 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 PSMA7O14818 248 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 CASP14P31944 242 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 PNMA5Q96PV4 448 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 PDGFDQ9GZP0 370 aaPredicted RBP24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 BLOC1S4Q9NUP1 217 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 USP17L15C9J2P7 530 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 USP17L13C9JLJ4 530 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 USP17L11C9JVI0 530 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 USP17L18D6R9N7 530 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 USP17L22D6RA61 530 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 USP17L17D6RBQ6 530 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 USP17L19D6RCP7 530 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 USP17L20D6RJB6 530 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 TUBB4AP04350 444 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 GYPCP04921 128 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 AMPD3Q01432 767 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 USP17L24Q0WX57 530 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 STK4Q13043 487 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 ABCB5Q2M3G0 1257 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 CC2D2BQ6DHV5 1058 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 USP17L6PQ6QN14 398 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 ANKRD7Q92527 254 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 NUDT12Q9BQG2 462 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 ZNF215Q9UL58 517 aaPredicted RBP24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 PCDHA1Q9Y5I3 950 aa24.27■■□□□ 1.48
GRAMD1A-212ENST00000600231 F5H6K3 240 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 JAG1P78504 1218 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 KLRC3Q07444 240 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 PDIA5Q14554 519 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 MTF1Q14872 753 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 EXOC1Q9NV70 894 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 DDX25Q9UHL0 483 aaKnown RBP24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 ITIH6Q6UXX5 1313 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 RGPD3A6NKT7 1758 aaPredicted RBP24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 RGPD4Q7Z3J3 1758 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 FXR1P51114 621 aaKnown RBP eCLIP24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 CDC37Q16543 378 aaPredicted RBP24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 SUPT20HQ8NEM7 779 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 GJA10Q969M2 543 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 SRRTQ9BXP5 876 aaKnown RBP24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 RAB34Q9BZG1 259 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 DNAI1Q9UI46 699 aa24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 ATF5Q9Y2D1 282 aaPredicted RBP24.26■■□□□ 1.47
GRAMD1A-212ENST00000600231 SOWAHDA6NJG2 315 aa24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 MFAP3LO75121 409 aa24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 ENTPD3O75355 529 aa24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 FCER1AP12319 257 aa24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 TTI2Q6NXR4 508 aa24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 HAS1Q92839 578 aa24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 CCDC47Q96A33 483 aaKnown RBP24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 TRIM47Q96LD4 638 aa24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 NUP88Q99567 741 aaPredicted RBP24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 DESI2Q9BSY9 194 aa24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 ATRNL1Q5VV63 1379 aa24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 SV2BQ7L1I2 683 aa24.25■■□□□ 1.47
GRAMD1A-212ENST00000600231 MCM6Q14566 821 aa24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 RRP1BQ14684 758 aaKnown RBP24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 DHTKD1Q96HY7 919 aaPredicted RBP24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 CDK5RAP3Q96JB5 506 aa24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 L2HGDHQ9H9P8 463 aa24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 FANCGO15287 622 aa24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 GH2P01242 217 aa24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 SYCP1Q15431 976 aa24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 SNX29Q8TEQ0 813 aa24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 HPS3Q969F9 1004 aa24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 CSRNP1Q96S65 589 aa24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 STK17AQ9UEE5 414 aa24.24■■□□□ 1.47
GRAMD1A-212ENST00000600231 LARP4BQ92615 738 aaKnown RBP24.23■■□□□ 1.47
GRAMD1A-212ENST00000600231 EEF2KMTQ96G04 330 aa24.23■■□□□ 1.47
GRAMD1A-212ENST00000600231 DUSP9Q99956 384 aaKnown RBP24.23■■□□□ 1.47
GRAMD1A-212ENST00000600231 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.23■■□□□ 1.474e-6■■□□□ 12.1
GRAMD1A-212ENST00000600231 MYMKA6NI61 221 aa24.23■■□□□ 1.47
GRAMD1A-212ENST00000600231 NDUFB10O96000 172 aa24.23■■□□□ 1.47
GRAMD1A-212ENST00000600231 SNAP25P60880 206 aa24.23■■□□□ 1.47
GRAMD1A-212ENST00000600231 UBXN1Q04323 297 aa24.23■■□□□ 1.47
GRAMD1A-212ENST00000600231 KRT79Q5XKE5 535 aa24.23■■□□□ 1.47
GRAMD1A-212ENST00000600231 CNGA4Q8IV77 575 aa24.23■■□□□ 1.47
GRAMD1A-212ENST00000600231 THAP9Q9H5L6 903 aa24.23■■□□□ 1.47
GRAMD1A-212ENST00000600231 RNF225M0QZC1 329 aaPredicted RBP24.22■■□□□ 1.47
GRAMD1A-212ENST00000600231 RAD9BQ6WBX8 426 aa24.22■■□□□ 1.47
GRAMD1A-212ENST00000600231 KCNK18Q7Z418 384 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms