RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 SPECC1Q5M775 1068 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 RESP18Q5W5W9 173 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 FMR1NBQ8N0W7 255 aaPredicted RBP17.23■□□□□ 0.35
VRK3-218ENST00000600031 AGBL1Q96MI9 1066 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 SLC38A10Q9HBR0 1119 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 DDX19AQ9NUU7 478 aaKnown RBP17.23■□□□□ 0.35
VRK3-218ENST00000600031 TMOD4Q9NZQ9 345 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 PARP14Q460N5 1801 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 PFKFB1P16118 471 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 TRAF1Q13077 416 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 NOLC1Q14978 699 aaKnown RBP eCLIP17.23■□□□□ 0.35
VRK3-218ENST00000600031 CAMK4Q16566 473 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 ARMC9Q7Z3E5 817 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 RBM46Q8TBY0 533 aaKnown RBP17.23■□□□□ 0.35
VRK3-218ENST00000600031 OTUD5Q96G74 571 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 ZNF408Q9H9D4 720 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 NMRK2Q9NPI5 230 aa17.23■□□□□ 0.35
VRK3-218ENST00000600031 GOLGA6L6A8MZA4 724 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 IRF6O14896 467 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 CCNT1O60563 726 aaKnown RBP17.22■□□□□ 0.35
VRK3-218ENST00000600031 ICAM1P05362 532 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 PPATQ06203 517 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 MTERF4Q7Z6M4 381 aaKnown RBP17.22■□□□□ 0.35
VRK3-218ENST00000600031 ERO1BQ86YB8 467 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 FAM200AQ8TCP9 573 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 TBC1D5Q92609 795 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 WNK4Q96J92 1243 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 CSRNP2Q9H175 543 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 TMEM60Q9H2L4 133 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 PTPRFP10586 1907 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 RLFQ13129 1914 aa17.22■□□□□ 0.35
VRK3-218ENST00000600031 SPDYE5A6NIY4 337 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 IL17AQ16552 155 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 CPXCR1Q8N123 301 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 ZNF579Q8NAF0 562 aaKnown RBP17.21■□□□□ 0.35
VRK3-218ENST00000600031 ZNF526Q8TF50 670 aaPredicted RBP17.21■□□□□ 0.35
VRK3-218ENST00000600031 FERMT2Q96AC1 680 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 PRIMPOLQ96LW4 560 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 CLSTN2Q9H4D0 955 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 CCPG1Q9ULG6 757 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 HPSEQ9Y251 543 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 FAM237AA0A1B0GTK4 181 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 HOXA13P31271 388 aaPredicted RBP17.21■□□□□ 0.35
VRK3-218ENST00000600031 DNTTIP2Q5QJE6 756 aaKnown RBP17.21■□□□□ 0.35
VRK3-218ENST00000600031 LDLRAD1Q5T700 205 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 CATSPERGQ6ZRH7 1159 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 RAVER2Q9HCJ3 691 aaKnown RBP17.21■□□□□ 0.35
VRK3-218ENST00000600031 SPTLC3Q9NUV7 552 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 MRPL11Q9Y3B7 192 aaKnown RBP17.21■□□□□ 0.35
VRK3-218ENST00000600031 MYH7BA7E2Y1 1941 aa17.21■□□□□ 0.35
VRK3-218ENST00000600031 DCAF8L1A6NGE4 600 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 VWA5AO00534 786 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 USP49Q70CQ1 688 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 ANO3Q9BYT9 981 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 TTC12Q9H892 705 aaPredicted RBP17.2■□□□□ 0.34
VRK3-218ENST00000600031 ABCB11O95342 1321 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 VWA3AA6NCI4 1184 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 PIK3CDO00329 1044 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 TDP2O95551 362 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 DSG3P32926 999 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 PLCB2Q00722 1185 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 AP3B2Q13367 1082 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 COG2Q14746 738 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 TREML2Q5T2D2 321 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 ZNF830Q96NB3 372 aaPredicted RBP17.2■□□□□ 0.34
VRK3-218ENST00000600031 TNMDQ9H2S6 317 aa17.2■□□□□ 0.34
VRK3-218ENST00000600031 KINO60870 393 aaKnown RBP17.19■□□□□ 0.34
VRK3-218ENST00000600031 ZBED4O75132 1171 aa17.19■□□□□ 0.34
VRK3-218ENST00000600031 ZNF202O95125 648 aa17.19■□□□□ 0.34
VRK3-218ENST00000600031 CFBP00751 764 aa17.19■□□□□ 0.34
VRK3-218ENST00000600031 TYRO3Q06418 890 aa17.19■□□□□ 0.34
VRK3-218ENST00000600031 ARL6IP4Q66PJ3 421 aaKnown RBP17.19■□□□□ 0.34
VRK3-218ENST00000600031 RBM43Q6ZSC3 357 aaKnown RBP17.19■□□□□ 0.34
VRK3-218ENST00000600031 OPTNQ96CV9 577 aa17.19■□□□□ 0.34
VRK3-218ENST00000600031 ADAMTS5Q9UNA0 930 aa17.19■□□□□ 0.34
VRK3-218ENST00000600031 A0A0G2JLL6 359 aaPredicted RBP17.18■□□□□ 0.34
VRK3-218ENST00000600031 NEMFO60524 1076 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 SYKP43405 635 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 PRRT2Q7Z6L0 340 aaPredicted RBP17.18■□□□□ 0.34
VRK3-218ENST00000600031 REPS2Q8NFH8 660 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 MYRIPQ8NFW9 859 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 CTDP1Q9Y5B0 961 aaPredicted RBP17.18■□□□□ 0.34
VRK3-218ENST00000600031 SPDYE3A6NKU9 549 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 CXCL11O14625 94 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 AP5Z1O43299 807 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 SLC37A4O43826 429 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 FDX1P10109 184 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 ALAS1P13196 640 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 PPIL2Q13356 520 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 MCTP2Q6DN12 878 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 POTEDQ86YR6 584 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 CLEC4DQ8WXI8 215 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 EPSTI1Q96J88 318 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 KCNH4Q9UQ05 1017 aa17.18■□□□□ 0.34
VRK3-218ENST00000600031 GCOM1H8Y6P7 765 aaPredicted RBP17.17■□□□□ 0.34
VRK3-218ENST00000600031 FOSP01100 380 aaPredicted RBP17.17■□□□□ 0.34
VRK3-218ENST00000600031 POLR2MP0CAP2 368 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 GJA5P36382 358 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms