RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PLEKHA8P1O95397 391 aa32.67■■■□□ 2.82
SSBP4-206ENST00000599699 CASTP20810 708 aaKnown RBP32.67■■■□□ 2.82
SSBP4-206ENST00000599699 CCDC144BQ3MJ40 725 aa32.67■■■□□ 2.82
SSBP4-206ENST00000599699 APOA5Q6Q788 366 aa32.67■■■□□ 2.82
SSBP4-206ENST00000599699 TBC1D5Q92609 795 aa32.67■■■□□ 2.82
SSBP4-206ENST00000599699 LENG1Q96BZ8 264 aaPredicted RBP32.67■■■□□ 2.82
SSBP4-206ENST00000599699 MPHOSPH6Q99547 160 aaKnown RBP32.67■■■□□ 2.82
SSBP4-206ENST00000599699 KBTBD13C9JR72 458 aa32.66■■■□□ 2.82
SSBP4-206ENST00000599699 DNM1LO00429 736 aa32.66■■■□□ 2.82
SSBP4-206ENST00000599699 EEPD1Q7L9B9 569 aa32.66■■■□□ 2.82
SSBP4-206ENST00000599699 CMTR1Q8N1G2 835 aaKnown RBP32.66■■■□□ 2.82
SSBP4-206ENST00000599699 MAF1Q9H063 256 aa32.66■■■□□ 2.82
SSBP4-206ENST00000599699 SEC63Q9UGP8 760 aaKnown RBP32.66■■■□□ 2.82
SSBP4-206ENST00000599699 BRPF3Q9ULD4 1205 aa32.66■■■□□ 2.82
SSBP4-206ENST00000599699 KLF18A0A0U1RQI7 1052 aa32.65■■■□□ 2.82
SSBP4-206ENST00000599699 ZBTB43O43298 467 aa32.65■■■□□ 2.82
SSBP4-206ENST00000599699 CFBP00751 764 aa32.65■■■□□ 2.82
SSBP4-206ENST00000599699 SMARCA1P28370 1054 aa32.65■■■□□ 2.82
SSBP4-206ENST00000599699 Q6ZUG5 572 aa32.65■■■□□ 2.82
SSBP4-206ENST00000599699 SRBD1Q8N5C6 995 aaKnown RBP32.65■■■□□ 2.82
SSBP4-206ENST00000599699 PGK1P00558 417 aa32.64■■■□□ 2.82
SSBP4-206ENST00000599699 MYH6P13533 1939 aa32.64■■■□□ 2.82
SSBP4-206ENST00000599699 RPS6KB1P23443 525 aa32.64■■■□□ 2.82
SSBP4-206ENST00000599699 FRMPD3Q5JV73 1810 aa32.64■■■□□ 2.82
SSBP4-206ENST00000599699 NOL8Q76FK4 1167 aaKnown RBP32.64■■■□□ 2.82
SSBP4-206ENST00000599699 FBXO16Q8IX29 292 aaPredicted RBP32.64■■■□□ 2.82
SSBP4-206ENST00000599699 CCDC82Q8N4S0 544 aa32.64■■■□□ 2.82
SSBP4-206ENST00000599699 DNERQ8NFT8 737 aa32.64■■■□□ 2.82
SSBP4-206ENST00000599699 SENP6Q9GZR1 1112 aaPredicted RBP32.64■■■□□ 2.82
SSBP4-206ENST00000599699 KATNBL1Q9H079 304 aa32.64■■■□□ 2.82
SSBP4-206ENST00000599699 BAZ2BQ9UIF8 2168 aaKnown RBP32.63■■■□□ 2.81
SSBP4-206ENST00000599699 MCM3APO60318 1980 aa32.63■■■□□ 2.81
SSBP4-206ENST00000599699 LOC102724159A0A0B4J2E5 919 aa32.63■■■□□ 2.81
SSBP4-206ENST00000599699 B4DLN1 442 aa32.63■■■□□ 2.81
SSBP4-206ENST00000599699 MRPL12P52815 198 aaKnown RBP32.63■■■□□ 2.81
SSBP4-206ENST00000599699 PDE4DQ08499 809 aa32.63■■■□□ 2.81
SSBP4-206ENST00000599699 PWP2Q15269 919 aaKnown RBP32.63■■■□□ 2.81
SSBP4-206ENST00000599699 LRRC41Q15345 812 aa32.63■■■□□ 2.81
SSBP4-206ENST00000599699 RNF180Q86T96 592 aa32.63■■■□□ 2.81
SSBP4-206ENST00000599699 SYTL5Q8TDW5 730 aaPredicted RBP32.63■■■□□ 2.81
SSBP4-206ENST00000599699 COL6A1P12109 1028 aa32.62■■■□□ 2.81
SSBP4-206ENST00000599699 RTN1Q16799 776 aa32.62■■■□□ 2.81
SSBP4-206ENST00000599699 TMTC3Q6ZXV5 915 aa32.62■■■□□ 2.81
SSBP4-206ENST00000599699 MORC4Q8TE76 937 aa32.62■■■□□ 2.81
SSBP4-206ENST00000599699 BRF1Q92994 677 aa32.62■■■□□ 2.81
SSBP4-206ENST00000599699 VTA1Q9NP79 307 aa32.62■■■□□ 2.81
SSBP4-206ENST00000599699 RBM28Q9NW13 759 aaKnown RBP32.62■■■□□ 2.81
SSBP4-206ENST00000599699 GOLGA8AA7E2F4 631 aa32.61■■■□□ 2.81
SSBP4-206ENST00000599699 GOLGA8BA8MQT2 603 aa32.61■■■□□ 2.81
SSBP4-206ENST00000599699 EVI5O60447 810 aa32.61■■■□□ 2.81
SSBP4-206ENST00000599699 DUSP11O75319 330 aaKnown RBP32.61■■■□□ 2.81
SSBP4-206ENST00000599699 APOBRQ0VD83 1088 aa32.61■■■□□ 2.81
SSBP4-206ENST00000599699 PRPF38BQ5VTL8 546 aaKnown RBP32.61■■■□□ 2.81
SSBP4-206ENST00000599699 TAAR1Q96RJ0 339 aa32.61■■■□□ 2.81
SSBP4-206ENST00000599699 OPLAHO14841 1288 aa32.6■■■□□ 2.81
SSBP4-206ENST00000599699 ADCYAP1R1P41586 468 aa32.6■■■□□ 2.81
SSBP4-206ENST00000599699 TNFAIP2Q03169 654 aa32.6■■■□□ 2.81
SSBP4-206ENST00000599699 RMDN3Q96TC7 470 aa32.6■■■□□ 2.81
SSBP4-206ENST00000599699 SPC25Q9HBM1 224 aa32.6■■■□□ 2.81
SSBP4-206ENST00000599699 COL20A1Q9P218 1284 aa32.6■■■□□ 2.81
SSBP4-206ENST00000599699 LCTP09848 1927 aa32.59■■■□□ 2.81
SSBP4-206ENST00000599699 SYNRGQ9UMZ2 1314 aa32.59■■■□□ 2.81
SSBP4-206ENST00000599699 EIF5BO60841 1220 aaKnown RBP32.59■■■□□ 2.81
SSBP4-206ENST00000599699 NSUN6Q8TEA1 469 aaKnown RBP32.59■■■□□ 2.81
SSBP4-206ENST00000599699 PDGFCQ9NRA1 345 aa32.59■■■□□ 2.81
SSBP4-206ENST00000599699 NR2E3Q9Y5X4 410 aa32.59■■■□□ 2.81
SSBP4-206ENST00000599699 CYP46A1Q9Y6A2 500 aa32.59■■■□□ 2.81
SSBP4-206ENST00000599699 C11orf97A0A1B0GVM6 126 aaPredicted RBP32.58■■■□□ 2.81
SSBP4-206ENST00000599699 ADCY6O43306 1168 aa32.58■■■□□ 2.81
SSBP4-206ENST00000599699 HSD17B4P51659 736 aa32.58■■■□□ 2.81
SSBP4-206ENST00000599699 ARHGEF16Q5VV41 709 aa32.58■■■□□ 2.81
SSBP4-206ENST00000599699 RUFY3Q7L099 469 aa32.58■■■□□ 2.81
SSBP4-206ENST00000599699 ZSWIM6Q9HCJ5 1215 aa32.58■■■□□ 2.81
SSBP4-206ENST00000599699 hCG_1642624A0A1W2PR95 340 aa32.57■■■□□ 2.8
SSBP4-206ENST00000599699 GCOM1H8Y6P7 765 aaPredicted RBP32.57■■■□□ 2.8
SSBP4-206ENST00000599699 POLR2MP0CAP2 368 aa32.57■■■□□ 2.8
SSBP4-206ENST00000599699 HOXA13P31271 388 aaPredicted RBP32.57■■■□□ 2.8
SSBP4-206ENST00000599699 IQSEC1Q6DN90 963 aa32.57■■■□□ 2.8
SSBP4-206ENST00000599699 TAPT1Q6NXT6 567 aa32.57■■■□□ 2.8
SSBP4-206ENST00000599699 MAP3K20Q9NYL2 800 aaKnown RBP32.57■■■□□ 2.8
SSBP4-206ENST00000599699 ADAMTS4O75173 837 aa32.56■■■□□ 2.8
SSBP4-206ENST00000599699 C6orf222P0C671 652 aaPredicted RBP32.56■■■□□ 2.8
SSBP4-206ENST00000599699 EDNRBP24530 442 aa32.56■■■□□ 2.8
SSBP4-206ENST00000599699 METAP2P50579 478 aaKnown RBP eCLIP32.56■■■□□ 2.8
SSBP4-206ENST00000599699 RCAN1P53805 252 aa32.56■■■□□ 2.8
SSBP4-206ENST00000599699 ATN1P54259 1190 aaPredicted RBP32.56■■■□□ 2.8
SSBP4-206ENST00000599699 SAMD3Q8N6K7 520 aa32.56■■■□□ 2.8
SSBP4-206ENST00000599699 FERMT2Q96AC1 680 aa32.56■■■□□ 2.8
SSBP4-206ENST00000599699 EIF2AK2P19525 551 aaKnown RBP32.55■■■□□ 2.8
SSBP4-206ENST00000599699 C7orf61Q8IZ16 206 aa32.55■■■□□ 2.8
SSBP4-206ENST00000599699 UPF3BQ9BZI7 483 aaKnown RBP32.55■■■□□ 2.8
SSBP4-206ENST00000599699 TM6SF1Q9BZW5 370 aa32.55■■■□□ 2.8
SSBP4-206ENST00000599699 H0YGN5 161 aa32.54■■■□□ 2.8
SSBP4-206ENST00000599699 SMPD1P17405 629 aa32.54■■■□□ 2.8
SSBP4-206ENST00000599699 GHRHRQ02643 423 aa32.54■■■□□ 2.8
SSBP4-206ENST00000599699 FCHSD1Q86WN1 690 aa32.54■■■□□ 2.8
SSBP4-206ENST00000599699 FBXL16Q8N461 479 aa32.54■■■□□ 2.8
SSBP4-206ENST00000599699 IWS1Q96ST2 819 aa32.54■■■□□ 2.8
SSBP4-206ENST00000599699 AP5M1Q9H0R1 490 aa32.54■■■□□ 2.8
SSBP4-206ENST00000599699 CCDC196A0A1B0GTZ2 297 aa32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms