RNA–Protein interactions for RNA: ENST00000599144.5

IRF3-222, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-222ENST00000599144 FAM227BQ96M60 508 aa22.7■■□□□ 1.22
IRF3-222ENST00000599144 TMEM47Q9BQJ4 181 aa22.7■■□□□ 1.22
IRF3-222ENST00000599144 ALDH8A1Q9H2A2 487 aaPredicted RBP22.7■■□□□ 1.22
IRF3-222ENST00000599144 SLC28A3Q9HAS3 691 aa22.7■■□□□ 1.22
IRF3-222ENST00000599144 VTA1Q9NP79 307 aa22.7■■□□□ 1.22
IRF3-222ENST00000599144 SALL3Q9BXA9 1300 aa22.7■■□□□ 1.22
IRF3-222ENST00000599144 NOVP48745 357 aa22.69■■□□□ 1.22
IRF3-222ENST00000599144 TTLL4Q14679 1199 aa22.69■■□□□ 1.22
IRF3-222ENST00000599144 DEFB128Q7Z7B8 93 aa22.69■■□□□ 1.22
IRF3-222ENST00000599144 MORC4Q8TE76 937 aa22.69■■□□□ 1.22
IRF3-222ENST00000599144 DCAF4Q8WV16 495 aa22.69■■□□□ 1.22
IRF3-222ENST00000599144 COPS5Q92905 334 aa22.69■■□□□ 1.22
IRF3-222ENST00000599144 WDR11Q9BZH6 1224 aa22.69■■□□□ 1.22
IRF3-222ENST00000599144 TNFRSF10AO00220 468 aa22.68■■□□□ 1.22
IRF3-222ENST00000599144 HAND2P61296 217 aa22.68■■□□□ 1.22
IRF3-222ENST00000599144 DUSP28Q4G0W2 176 aa22.68■■□□□ 1.22
IRF3-222ENST00000599144 PPP4R3BQ5MIZ7 849 aa22.68■■□□□ 1.22
IRF3-222ENST00000599144 AKNAD1Q5T1N1 836 aa22.68■■□□□ 1.22
IRF3-222ENST00000599144 CLEC4DQ8WXI8 215 aa22.68■■□□□ 1.22
IRF3-222ENST00000599144 MTIF3Q9H2K0 278 aaKnown RBP22.68■■□□□ 1.22
IRF3-222ENST00000599144 THEGQ9P2T0 379 aa22.68■■□□□ 1.22
IRF3-222ENST00000599144 RAPGEFL1Q9UHV5 662 aa22.68■■□□□ 1.22
IRF3-222ENST00000599144 ANAPC4Q9UJX5 808 aa22.68■■□□□ 1.22
IRF3-222ENST00000599144 SLC4A7Q9Y6M7 1214 aa22.68■■□□□ 1.22
IRF3-222ENST00000599144 A0A0D9SFI3 127 aa22.67■■□□□ 1.22
IRF3-222ENST00000599144 RFXAPO00287 272 aa22.67■■□□□ 1.22
IRF3-222ENST00000599144 ORC4O43929 436 aa22.67■■□□□ 1.22
IRF3-222ENST00000599144 FAM47CQ5HY64 1035 aa22.67■■□□□ 1.22
IRF3-222ENST00000599144 ANKRD45Q5TZF3 282 aa22.67■■□□□ 1.22
IRF3-222ENST00000599144 Q9Y3F1 56 aa22.67■■□□□ 1.22
IRF3-222ENST00000599144 TNKSO95271 1327 aa22.66■■□□□ 1.22
IRF3-222ENST00000599144 FGAP02671 866 aa22.66■■□□□ 1.22
IRF3-222ENST00000599144 PURAQ00577 322 aaKnown RBP22.66■■□□□ 1.22
IRF3-222ENST00000599144 PPP2R2DQ66LE6 453 aa22.66■■□□□ 1.22
IRF3-222ENST00000599144 BTNL9Q6UXG8 535 aa22.66■■□□□ 1.22
IRF3-222ENST00000599144 OR6J1Q8NGC5 347 aa22.66■■□□□ 1.22
IRF3-222ENST00000599144 ASB2Q96Q27 587 aa22.66■■□□□ 1.22
IRF3-222ENST00000599144 CPVLQ9H3G5 476 aa22.66■■□□□ 1.22
IRF3-222ENST00000599144 CERS4Q9HA82 394 aa22.66■■□□□ 1.22
IRF3-222ENST00000599144 TOP1P11387 765 aaKnown RBP22.65■■□□□ 1.22
IRF3-222ENST00000599144 CHMP4BP1P59074 171 aa22.65■■□□□ 1.22
IRF3-222ENST00000599144 ZNF589Q86UQ0 364 aaPredicted RBP22.65■■□□□ 1.22
IRF3-222ENST00000599144 ADAMTS19Q8TE59 1207 aa22.65■■□□□ 1.22
IRF3-222ENST00000599144 NECAB3Q96P71 396 aaPredicted RBP22.65■■□□□ 1.22
IRF3-222ENST00000599144 ADD3Q9UEY8 706 aaKnown RBP22.65■■□□□ 1.22
IRF3-222ENST00000599144 LCTP09848 1927 aa22.65■■□□□ 1.22
IRF3-222ENST00000599144 FGRP09769 529 aa22.64■■□□□ 1.21
IRF3-222ENST00000599144 PDHBP11177 359 aa22.64■■□□□ 1.21
IRF3-222ENST00000599144 ATP2A2P16615 1042 aaKnown RBP22.64■■□□□ 1.21
IRF3-222ENST00000599144 NBPF20Q3BBV1 942 aa22.64■■□□□ 1.21
IRF3-222ENST00000599144 RNF207Q6ZRF8 634 aa22.64■■□□□ 1.21
IRF3-222ENST00000599144 ATXN2LQ8WWM7 1075 aaKnown RBP22.64■■□□□ 1.21
IRF3-222ENST00000599144 EVI5LQ96CN4 794 aa22.64■■□□□ 1.21
IRF3-222ENST00000599144 ARHGEF15O94989 841 aa22.63■■□□□ 1.21
IRF3-222ENST00000599144 GOLGA8HP0CJ92 632 aa22.63■■□□□ 1.21
IRF3-222ENST00000599144 NMIQ13287 307 aaPredicted RBP22.63■■□□□ 1.21
IRF3-222ENST00000599144 ALX1Q15699 326 aa22.63■■□□□ 1.21
IRF3-222ENST00000599144 TBC1D10CQ8IV04 446 aa22.63■■□□□ 1.21
IRF3-222ENST00000599144 RPUSD2Q8IZ73 545 aaKnown RBP22.63■■□□□ 1.21
IRF3-222ENST00000599144 ZKSCAN3Q9BRR0 538 aa22.63■■□□□ 1.21
IRF3-222ENST00000599144 MTG1Q9BT17 334 aaPredicted RBP22.63■■□□□ 1.21
IRF3-222ENST00000599144 HELLSQ9NRZ9 838 aa22.63■■□□□ 1.21
IRF3-222ENST00000599144 POLR3EQ9NVU0 708 aa22.63■■□□□ 1.21
IRF3-222ENST00000599144 TTC28Q96AY4 2481 aa22.63■■□□□ 1.21
IRF3-222ENST00000599144 RBM47A0AV96 593 aaKnown RBP22.62■■□□□ 1.21
IRF3-222ENST00000599144 ARIH2O95376 493 aa22.62■■□□□ 1.21
IRF3-222ENST00000599144 RPS6P62753 249 aaKnown RBP22.62■■□□□ 1.21
IRF3-222ENST00000599144 MRPS5P82675 430 aaKnown RBP22.62■■□□□ 1.21
IRF3-222ENST00000599144 TFF2Q03403 129 aa22.62■■□□□ 1.21
IRF3-222ENST00000599144 PDE4DQ08499 809 aa22.62■■□□□ 1.21
IRF3-222ENST00000599144 GPHNQ9NQX3 736 aaPredicted RBP22.62■■□□□ 1.21
IRF3-222ENST00000599144 PCDHA11Q9Y5I1 949 aa22.62■■□□□ 1.21
IRF3-222ENST00000599144 EPOPA6NHQ4 379 aa22.61■■□□□ 1.21
IRF3-222ENST00000599144 CA3P07451 260 aa22.61■■□□□ 1.21
IRF3-222ENST00000599144 HSPD1P10809 573 aaKnown RBP22.61■■□□□ 1.21
IRF3-222ENST00000599144 COL9A1P20849 921 aa22.61■■□□□ 1.21
IRF3-222ENST00000599144 CPT1AP50416 773 aa22.61■■□□□ 1.21
IRF3-222ENST00000599144 PDE1AP54750 535 aa22.61■■□□□ 1.21
IRF3-222ENST00000599144 ZNF543Q08ER8 600 aa22.61■■□□□ 1.21
IRF3-222ENST00000599144 PPP2R5BQ15173 497 aa22.61■■□□□ 1.21
IRF3-222ENST00000599144 USH1GQ495M9 461 aa22.61■■□□□ 1.21
IRF3-222ENST00000599144 KRT40Q6A162 431 aa22.61■■□□□ 1.21
IRF3-222ENST00000599144 CRBNQ96SW2 442 aa22.61■■□□□ 1.21
IRF3-222ENST00000599144 UBA5Q9GZZ9 404 aa22.61■■□□□ 1.21
IRF3-222ENST00000599144 CHD9Q3L8U1 2897 aa22.6■■□□□ 1.21
IRF3-222ENST00000599144 MCMDC2Q4G0Z9 681 aa22.6■■□□□ 1.21
IRF3-222ENST00000599144 SPRED2Q7Z698 418 aa22.6■■□□□ 1.21
IRF3-222ENST00000599144 TBC1D5Q92609 795 aa22.6■■□□□ 1.21
IRF3-222ENST00000599144 UHRF1Q96T88 793 aaPredicted RBP22.6■■□□□ 1.21
IRF3-222ENST00000599144 SEZ6LQ9BYH1 1024 aa22.6■■□□□ 1.21
IRF3-222ENST00000599144 TCP11L1Q9NUJ3 509 aa22.6■■□□□ 1.21
IRF3-222ENST00000599144 SUPT20HL2P0C7V6 817 aa22.59■■□□□ 1.21
IRF3-222ENST00000599144 TXNP10599 105 aaKnown RBP22.59■■□□□ 1.21
IRF3-222ENST00000599144 ZBTB47Q9UFB7 747 aaPredicted RBP22.59■■□□□ 1.21
IRF3-222ENST00000599144 NEDD4P46934 1319 aa22.58■■□□□ 1.21
IRF3-222ENST00000599144 EDNRBP24530 442 aa22.58■■□□□ 1.21
IRF3-222ENST00000599144 SKIV2LQ15477 1246 aaKnown RBP22.58■■□□□ 1.21
IRF3-222ENST00000599144 TMEM67Q5HYA8 995 aa22.58■■□□□ 1.21
IRF3-222ENST00000599144 FTOQ9C0B1 505 aaKnown RBP eCLIP22.58■■□□□ 1.21
IRF3-222ENST00000599144 IQCF3P0C7M6 154 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms