RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 RARAP10276 462 aa12.48□□□□□ -0.41
SMG9-207ENST00000598860 IL1R1P14778 569 aa12.48□□□□□ -0.41
SMG9-207ENST00000598860 TBC1D8BQ0IIM8 1120 aa12.48□□□□□ -0.41
SMG9-207ENST00000598860 TTF1Q15361 905 aaPredicted RBP12.48□□□□□ -0.41
SMG9-207ENST00000598860 DEFB115Q30KQ5 88 aa12.48□□□□□ -0.41
SMG9-207ENST00000598860 CST9Q5W186 159 aa12.48□□□□□ -0.41
SMG9-207ENST00000598860 TICAM2Q86XR7 235 aa12.48□□□□□ -0.41
SMG9-207ENST00000598860 TMEM87AQ8NBN3 555 aa12.48□□□□□ -0.41
SMG9-207ENST00000598860 TDRD7Q8NHU6 1098 aaKnown RBP12.48□□□□□ -0.41
SMG9-207ENST00000598860 MYOZ2Q9NPC6 264 aa12.48□□□□□ -0.41
SMG9-207ENST00000598860 ABT1Q9ULW3 272 aaKnown RBP12.48□□□□□ -0.41
SMG9-207ENST00000598860 SHISA8B8ZZ34 492 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 PHACTR2O75167 634 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 FRAT2O75474 233 aaPredicted RBP12.47□□□□□ -0.41
SMG9-207ENST00000598860 CELF2O95319 508 aaKnown RBP12.47□□□□□ -0.41
SMG9-207ENST00000598860 EPXP11678 715 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 MCAMP43121 646 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 RASGRF1Q13972 1273 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 KRT26Q7Z3Y9 468 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 TNFRSF25Q93038 417 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 EVI5LQ96CN4 794 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 FRMD6Q96NE9 622 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 UBE2OQ9C0C9 1292 aaKnown RBP12.47□□□□□ -0.41
SMG9-207ENST00000598860 BOLA2Q9H3K6 86 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 ZFYVE28Q9HCC9 887 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 ENAMQ9NRM1 1142 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 HDAC9Q9UKV0 1011 aa12.47□□□□□ -0.41
SMG9-207ENST00000598860 TRPM7Q96QT4 1865 aa12.46□□□□□ -0.41
SMG9-207ENST00000598860 CNTNAP1P78357 1384 aa12.46□□□□□ -0.41
SMG9-207ENST00000598860 HDLBPQ00341 1268 aaKnown RBP12.46□□□□□ -0.41
SMG9-207ENST00000598860 LRRFIP1Q32MZ4 808 aaKnown RBP12.46□□□□□ -0.41
SMG9-207ENST00000598860 TSHZ3Q63HK5 1081 aa12.46□□□□□ -0.41
SMG9-207ENST00000598860 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.41
SMG9-207ENST00000598860 KIAA0825Q8IV33 1275 aa12.46□□□□□ -0.41
SMG9-207ENST00000598860 ZGPATQ8N5A5 531 aaKnown RBP12.46□□□□□ -0.41
SMG9-207ENST00000598860 SPATA5Q8NB90 893 aa12.46□□□□□ -0.41
SMG9-207ENST00000598860 NEDD1Q8NHV4 660 aa12.46□□□□□ -0.41
SMG9-207ENST00000598860 WDR66Q8TBY9 1149 aa12.46□□□□□ -0.41
SMG9-207ENST00000598860 TBC1D22AQ8WUA7 517 aa12.46□□□□□ -0.41
SMG9-207ENST00000598860 CCDC74AQ96AQ1 378 aa12.46□□□□□ -0.41
SMG9-207ENST00000598860 ZNF408Q9H9D4 720 aa12.46□□□□□ -0.41
SMG9-207ENST00000598860 AK5Q9Y6K8 562 aa12.46□□□□□ -0.41
SMG9-207ENST00000598860 COL1A1P02452 1464 aaPredicted RBP12.46□□□□□ -0.42
SMG9-207ENST00000598860 FAM205AQ6ZU69 1335 aa12.45□□□□□ -0.42
SMG9-207ENST00000598860 SALL1Q9NSC2 1324 aa12.45□□□□□ -0.42
SMG9-207ENST00000598860 RASSF10A6NK89 507 aa12.45□□□□□ -0.42
SMG9-207ENST00000598860 GSPT1P15170 499 aaKnown RBP12.45□□□□□ -0.42
SMG9-207ENST00000598860 FKBP1AP62942 108 aaKnown RBP12.45□□□□□ -0.42
SMG9-207ENST00000598860 ANGEL2Q5VTE6 544 aaKnown RBP12.45□□□□□ -0.42
SMG9-207ENST00000598860 SKAP1Q86WV1 359 aa12.45□□□□□ -0.42
SMG9-207ENST00000598860 DNAJC2Q99543 621 aaKnown RBP12.45□□□□□ -0.42
SMG9-207ENST00000598860 PAG1Q9NWQ8 432 aa12.45□□□□□ -0.42
SMG9-207ENST00000598860 GGA3Q9NZ52 723 aa12.45□□□□□ -0.42
SMG9-207ENST00000598860 HMG20BQ9P0W2 317 aa12.45□□□□□ -0.42
SMG9-207ENST00000598860 ECM29Q5VYK3 1845 aa12.45□□□□□ -0.42
SMG9-207ENST00000598860 ASTN2O75129 1339 aaPredicted RBP12.44□□□□□ -0.42
SMG9-207ENST00000598860 ELOA3CA0A087WX78 387 aaPredicted RBP12.44□□□□□ -0.42
SMG9-207ENST00000598860 ELOA3DA6NLF2 546 aaPredicted RBP12.44□□□□□ -0.42
SMG9-207ENST00000598860 HIP1O00291 1037 aa12.44□□□□□ -0.42
SMG9-207ENST00000598860 ELOA3BQ3SY89 546 aa12.44□□□□□ -0.42
SMG9-207ENST00000598860 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMG9-207ENST00000598860 PI16Q6UXB8 463 aa12.44□□□□□ -0.42
SMG9-207ENST00000598860 ELOA3Q8NG57 546 aa12.44□□□□□ -0.42
SMG9-207ENST00000598860 CHRDQ9H2X0 955 aa12.44□□□□□ -0.42
SMG9-207ENST00000598860 FAM181BA6NEQ2 426 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 ADARB2-AS1A8MUL3 147 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 ADM5C9JUS6 153 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 GOLIM4O00461 696 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 WNT10BO00744 389 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 EIF5BO60841 1220 aaKnown RBP12.43□□□□□ -0.42
SMG9-207ENST00000598860 ZFYP08048 801 aaPredicted RBP12.43□□□□□ -0.42
SMG9-207ENST00000598860 SDSP20132 328 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 IRS1P35568 1242 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 NBPF9Q3BBW0 867 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 SPTY2D1Q68D10 685 aaPredicted RBP12.43□□□□□ -0.42
SMG9-207ENST00000598860 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 DLK2Q6UY11 383 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 DHX32Q7L7V1 743 aaKnown RBP12.43□□□□□ -0.42
SMG9-207ENST00000598860 CERS5Q8N5B7 392 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 KBTBD3Q8NAB2 608 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 EPS8L3Q8TE67 593 aaKnown RBP12.43□□□□□ -0.42
SMG9-207ENST00000598860 RILPL2Q969X0 211 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 FSD1Q9BTV5 496 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMG9-207ENST00000598860 ABI2Q9NYB9 513 aaPredicted RBP12.43□□□□□ -0.42
SMG9-207ENST00000598860 JAG2Q9Y219 1238 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 SUGT1Q9Y2Z0 365 aa12.43□□□□□ -0.42
SMG9-207ENST00000598860 CDK5RAP2Q96SN8 1893 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 PITPNM2Q9BZ72 1349 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 WDR33Q9C0J8 1336 aaKnown RBP12.42□□□□□ -0.42
SMG9-207ENST00000598860 F8W031 263 aaPredicted RBP12.42□□□□□ -0.42
SMG9-207ENST00000598860 CDC45O75419 566 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 MAP3K6O95382 1288 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 CYP2E1P05181 493 aaPredicted RBP12.42□□□□□ -0.42
SMG9-207ENST00000598860 ALAS2P22557 587 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 AMPD1P23109 780 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 ADH7P40394 386 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 ECE1P42892 770 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 MAP3K12Q12852 859 aa12.42□□□□□ -0.42
SMG9-207ENST00000598860 CHAF1AQ13111 956 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms