RNA–Protein interactions for RNA: ENST00000598073.5

GRAMD1A-206, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-206ENST00000598073 TBC1D32Q96NH3 1257 aa13.33□□□□□ -0.28
GRAMD1A-206ENST00000598073 NCOA5Q9HCD5 579 aaKnown RBP13.33□□□□□ -0.28
GRAMD1A-206ENST00000598073 COL20A1Q9P218 1284 aa13.33□□□□□ -0.28
GRAMD1A-206ENST00000598073 TPCN1Q9ULQ1 816 aa13.33□□□□□ -0.28
GRAMD1A-206ENST00000598073 NAP1L2Q9ULW6 460 aaPredicted RBP13.33□□□□□ -0.28
GRAMD1A-206ENST00000598073 FRMPD3Q5JV73 1810 aa13.33□□□□□ -0.28
GRAMD1A-206ENST00000598073 RPTORQ8N122 1335 aa13.33□□□□□ -0.28
GRAMD1A-206ENST00000598073 LRRC37A2A6NM11 1700 aa13.33□□□□□ -0.28
GRAMD1A-206ENST00000598073 CCDC85CA6NKD9 419 aa13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 IFNAR1P17181 557 aa13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 HSD17B4P51659 736 aa13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 ANKRD1Q15327 319 aa13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 SAMD3Q8N6K7 520 aa13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 SYTL5Q8TDW5 730 aaPredicted RBP13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 KATNBL1Q9H079 304 aa13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 NRBP1Q9UHY1 535 aa13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 V9GY48 417 aaPredicted RBP13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 SYNGAP1Q96PV0 1343 aa13.32□□□□□ -0.28
GRAMD1A-206ENST00000598073 LOC102724159A0A0B4J2E5 919 aa13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 PTPDC1A2A3K4 754 aa13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 POTEFA5A3E0 1075 aa13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 PRPF3O43395 683 aaKnown RBP13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 PFKFB2O60825 505 aa13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 MYCP01106 439 aaPredicted RBP13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 GJB1P08034 283 aa13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 CCND3P30281 292 aaPredicted RBP13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 PWP2Q15269 919 aaKnown RBP13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 PKN1Q16512 942 aa13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 PRAMEF19Q5SWL8 479 aa13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 TYW1BQ6NUM6 668 aa13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.31□□□□□ -0.285e-9■■■□□ 18.6
GRAMD1A-206ENST00000598073 RNF208Q9H0X6 261 aa13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 HMX1Q9NP08 348 aaPredicted RBP13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 MAP3K20Q9NYL2 800 aaKnown RBP13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 SEC63Q9UGP8 760 aaKnown RBP13.31□□□□□ -0.28
GRAMD1A-206ENST00000598073 LARGE1O95461 756 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 ZNF865P0CJ78 1059 aaPredicted RBP13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 EDNRBP24530 442 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 CALML3P27482 149 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 ALDH5A1P51649 535 aaPredicted RBP13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 SCRN1Q12765 414 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 ME3Q16798 604 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 LHX8Q68G74 356 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 WWC2Q6AWC2 1192 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 ARMCX2Q7L311 632 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 DNERQ8NFT8 737 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 TAAR1Q96RJ0 339 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 RNF26Q9BY78 433 aaPredicted RBP13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 CRISPLD2Q9H0B8 497 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 UPF2Q9HAU5 1272 aaKnown RBP13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 DDX49Q9Y6V7 483 aaKnown RBP13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 BRCA2P51587 3418 aa13.3□□□□□ -0.28
GRAMD1A-206ENST00000598073 KIAA1217Q5T5P2 1943 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 ASB14A6NK59 587 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 PIK3CDO00329 1044 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 MEIS2O14770 477 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 CFBP00751 764 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 GJA8P48165 433 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 SOX10P56693 466 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 STK3Q13188 491 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 RABEP1Q15276 862 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 PFKFB3Q16875 520 aaPredicted RBP13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 GPKOWQ92917 476 aaPredicted RBP eCLIP13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 PHKBQ93100 1093 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 SHISA4Q96DD7 197 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 TMEM106CQ9BVX2 250 aa13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 SLKQ9H2G2 1235 aaPredicted RBP13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 ADD3Q9UEY8 706 aaKnown RBP13.29□□□□□ -0.28
GRAMD1A-206ENST00000598073 GCOM1H8Y6P7 765 aaPredicted RBP13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 hCG_1984214I3L0E3 225 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 STXBP3O00186 592 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 SEPT4O43236 478 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 SGPL1O95470 568 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 CTDNEP1O95476 244 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 POLR2MP0CAP2 368 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 SCG2P13521 617 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 HOXA13P31271 388 aaPredicted RBP13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 ST3GAL1Q11201 340 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 HEATR3Q7Z4Q2 680 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 ZNF713Q8N859 430 aaPredicted RBP13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 IL27Q8NEV9 243 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 U2AF1L4Q8WU68 220 aaKnown RBP13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 DEFB118Q96PH6 123 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 ABHD16BQ9H3Z7 469 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 BARHL2Q9NY43 387 aa13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 RBM27Q9P2N5 1060 aaKnown RBP13.28□□□□□ -0.28
GRAMD1A-206ENST00000598073 PPFIA3O75145 1194 aa13.27□□□□□ -0.29
GRAMD1A-206ENST00000598073 EN2P19622 333 aaPredicted RBP13.27□□□□□ -0.29
GRAMD1A-206ENST00000598073 RGS19P49795 217 aa13.27□□□□□ -0.29
GRAMD1A-206ENST00000598073 ACVR2BQ13705 512 aa13.27□□□□□ -0.29
GRAMD1A-206ENST00000598073 TAPT1Q6NXT6 567 aa13.27□□□□□ -0.29
GRAMD1A-206ENST00000598073 PPP1R18Q6NYC8 613 aa13.27□□□□□ -0.29
GRAMD1A-206ENST00000598073 USP17L6PQ6QN14 398 aa13.27□□□□□ -0.29
GRAMD1A-206ENST00000598073 TEX2Q8IWB9 1127 aa13.27□□□□□ -0.29
GRAMD1A-206ENST00000598073 NECAB1Q8N987 351 aa13.27□□□□□ -0.29
GRAMD1A-206ENST00000598073 NSUN6Q8TEA1 469 aaKnown RBP13.27□□□□□ -0.29
GRAMD1A-206ENST00000598073 GTF3C6Q969F1 213 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms