RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 DUSP28Q4G0W2 176 aa18.75■□□□□ 0.59
LINC02560-201ENST00000596379 HERVK_113Q902F9 699 aa18.75■□□□□ 0.59
LINC02560-201ENST00000596379 CXXC1Q9P0U4 656 aaPredicted RBP18.75■□□□□ 0.59
LINC02560-201ENST00000596379 TRIM6-TRIM34B2RNG4 842 aa18.74■□□□□ 0.59
LINC02560-201ENST00000596379 CALML3P27482 149 aa18.74■□□□□ 0.59
LINC02560-201ENST00000596379 CCL23P55773 120 aa18.74■□□□□ 0.59
LINC02560-201ENST00000596379 MFSD6Q6ZSS7 791 aa18.74■□□□□ 0.59
LINC02560-201ENST00000596379 TICAM2Q86XR7 235 aa18.74■□□□□ 0.59
LINC02560-201ENST00000596379 CLEC4DQ8WXI8 215 aa18.74■□□□□ 0.59
LINC02560-201ENST00000596379 RILPL2Q969X0 211 aa18.74■□□□□ 0.59
LINC02560-201ENST00000596379 TTC14Q96N46 770 aa18.74■□□□□ 0.59
LINC02560-201ENST00000596379 NOC4LQ9BVI4 516 aaKnown RBP18.74■□□□□ 0.59
LINC02560-201ENST00000596379 WDR11Q9BZH6 1224 aa18.74■□□□□ 0.59
LINC02560-201ENST00000596379 ZMYM6O95789 1325 aa18.74■□□□□ 0.59
LINC02560-201ENST00000596379 LOC102724159A0A0B4J2E5 919 aa18.73■□□□□ 0.59
LINC02560-201ENST00000596379 ZNF543Q08ER8 600 aa18.73■□□□□ 0.59
LINC02560-201ENST00000596379 PWP2Q15269 919 aaKnown RBP18.73■□□□□ 0.59
LINC02560-201ENST00000596379 AKNAD1Q5T1N1 836 aa18.73■□□□□ 0.59
LINC02560-201ENST00000596379 SLC30A10Q6XR72 485 aa18.73■□□□□ 0.59
LINC02560-201ENST00000596379 RNF207Q6ZRF8 634 aa18.73■□□□□ 0.59
LINC02560-201ENST00000596379 USP38Q8NB14 1042 aa18.73■□□□□ 0.59
LINC02560-201ENST00000596379 LNPKQ9C0E8 428 aa18.73■□□□□ 0.59
LINC02560-201ENST00000596379 CCDC171Q6TFL3 1326 aa18.73■□□□□ 0.59
LINC02560-201ENST00000596379 RBM47A0AV96 593 aaKnown RBP18.72■□□□□ 0.59
LINC02560-201ENST00000596379 OTOP2Q7RTS6 562 aa18.72■□□□□ 0.59
LINC02560-201ENST00000596379 GAS2L1Q99501 681 aaPredicted RBP18.72■□□□□ 0.59
LINC02560-201ENST00000596379 WNT8AQ9H1J5 351 aa18.72■□□□□ 0.59
LINC02560-201ENST00000596379 ALDH8A1Q9H2A2 487 aaPredicted RBP18.72■□□□□ 0.59
LINC02560-201ENST00000596379 MTIF3Q9H2K0 278 aaKnown RBP18.72■□□□□ 0.59
LINC02560-201ENST00000596379 PRDM12Q9H4Q4 367 aa18.72■□□□□ 0.59
LINC02560-201ENST00000596379 MSRAQ9UJ68 235 aa18.72■□□□□ 0.59
LINC02560-201ENST00000596379 PNMA2Q9UL42 364 aa18.72■□□□□ 0.59
LINC02560-201ENST00000596379 PRUNE2Q8WUY3 3088 aa18.72■□□□□ 0.59
LINC02560-201ENST00000596379 GBF1Q92538 1859 aa18.71■□□□□ 0.59
LINC02560-201ENST00000596379 MYL3P08590 195 aa18.71■□□□□ 0.59
LINC02560-201ENST00000596379 SNHG28P0DPA3 235 aa18.71■□□□□ 0.59
LINC02560-201ENST00000596379 RAB30Q15771 203 aa18.71■□□□□ 0.59
LINC02560-201ENST00000596379 B4GALNT3Q6L9W6 998 aa18.71■□□□□ 0.59
LINC02560-201ENST00000596379 TBC1D10CQ8IV04 446 aa18.71■□□□□ 0.59
LINC02560-201ENST00000596379 RPUSD2Q8IZ73 545 aaKnown RBP18.71■□□□□ 0.59
LINC02560-201ENST00000596379 ZKSCAN3Q9BRR0 538 aa18.71■□□□□ 0.59
LINC02560-201ENST00000596379 POLR3EQ9NVU0 708 aa18.71■□□□□ 0.59
LINC02560-201ENST00000596379 VCANP13611 3396 aa18.7■□□□□ 0.58
LINC02560-201ENST00000596379 GOLGA8HP0CJ92 632 aa18.7■□□□□ 0.58
LINC02560-201ENST00000596379 PCP11498 1178 aaKnown RBP18.7■□□□□ 0.58
LINC02560-201ENST00000596379 SDSP20132 328 aa18.7■□□□□ 0.58
LINC02560-201ENST00000596379 CPT1AP50416 773 aa18.7■□□□□ 0.58
LINC02560-201ENST00000596379 RPS6P62753 249 aaKnown RBP18.7■□□□□ 0.58
LINC02560-201ENST00000596379 PURAQ00577 322 aaKnown RBP18.7■□□□□ 0.58
LINC02560-201ENST00000596379 PDE4DQ08499 809 aa18.7■□□□□ 0.58
LINC02560-201ENST00000596379 OR6J1Q8NGC5 347 aa18.7■□□□□ 0.58
LINC02560-201ENST00000596379 PPM1EQ8WY54 764 aa18.7■□□□□ 0.58
LINC02560-201ENST00000596379 SCLYQ96I15 445 aa18.7■□□□□ 0.58
LINC02560-201ENST00000596379 NKX2-4Q9H2Z4 354 aa18.7■□□□□ 0.58
LINC02560-201ENST00000596379 RNF41Q9H4P4 317 aaPredicted RBP18.7■□□□□ 0.58
LINC02560-201ENST00000596379 TRMT13Q9NUP7 481 aaKnown RBP18.7■□□□□ 0.58
LINC02560-201ENST00000596379 SUPT20HL2P0C7V6 817 aa18.69■□□□□ 0.58
LINC02560-201ENST00000596379 CYP2C9P11712 490 aa18.69■□□□□ 0.58
LINC02560-201ENST00000596379 DNERQ8NFT8 737 aa18.69■□□□□ 0.58
LINC02560-201ENST00000596379 ESR2Q92731 530 aa18.69■□□□□ 0.58
LINC02560-201ENST00000596379 SYMPKQ92797 1274 aaKnown RBP18.69■□□□□ 0.58
LINC02560-201ENST00000596379 VWCEQ96DN2 955 aa18.69■□□□□ 0.58
LINC02560-201ENST00000596379 MPHOSPH6Q99547 160 aaKnown RBP18.69■□□□□ 0.58
LINC02560-201ENST00000596379 MTG1Q9BT17 334 aaPredicted RBP18.69■□□□□ 0.58
LINC02560-201ENST00000596379 CPVLQ9H3G5 476 aa18.69■□□□□ 0.58
LINC02560-201ENST00000596379 PRDM6Q9NQX0 595 aa18.69■□□□□ 0.58
LINC02560-201ENST00000596379 GPHNQ9NQX3 736 aaPredicted RBP18.69■□□□□ 0.58
LINC02560-201ENST00000596379 YBX2Q9Y2T7 364 aaKnown RBP18.69■□□□□ 0.58
LINC02560-201ENST00000596379 TNKSO95271 1327 aa18.69■□□□□ 0.58
LINC02560-201ENST00000596379 NEDD4P46934 1319 aa18.69■□□□□ 0.58
LINC02560-201ENST00000596379 WDR19Q8NEZ3 1342 aa18.69■□□□□ 0.58
LINC02560-201ENST00000596379 ZNF213O14771 459 aa18.68■□□□□ 0.58
LINC02560-201ENST00000596379 EDNRBP24530 442 aa18.68■□□□□ 0.58
LINC02560-201ENST00000596379 MFAP1P55081 439 aaKnown RBP18.68■□□□□ 0.58
LINC02560-201ENST00000596379 PPP2R5BQ15173 497 aa18.68■□□□□ 0.58
LINC02560-201ENST00000596379 USH1GQ495M9 461 aa18.68■□□□□ 0.58
LINC02560-201ENST00000596379 DGKHQ86XP1 1220 aa18.68■□□□□ 0.58
LINC02560-201ENST00000596379 COPS5Q92905 334 aa18.68■□□□□ 0.58
LINC02560-201ENST00000596379 UBA5Q9GZZ9 404 aa18.68■□□□□ 0.58
LINC02560-201ENST00000596379 SLC28A3Q9HAS3 691 aa18.68■□□□□ 0.58
LINC02560-201ENST00000596379 NKRFO15226 690 aaKnown RBP eCLIP18.67■□□□□ 0.58
LINC02560-201ENST00000596379 RABGGTBP53611 331 aa18.67■□□□□ 0.58
LINC02560-201ENST00000596379 ADGRE1Q14246 886 aa18.67■□□□□ 0.58
LINC02560-201ENST00000596379 NBPF20Q3BBV1 942 aa18.67■□□□□ 0.58
LINC02560-201ENST00000596379 BRDTQ58F21 947 aaPredicted RBP18.67■□□□□ 0.58
LINC02560-201ENST00000596379 FAM47CQ5HY64 1035 aa18.67■□□□□ 0.58
LINC02560-201ENST00000596379 GPATCH4Q5T3I0 446 aaKnown RBP18.67■□□□□ 0.58
LINC02560-201ENST00000596379 PLEKHM2Q8IWE5 1019 aa18.67■□□□□ 0.58
LINC02560-201ENST00000596379 SMC5Q8IY18 1101 aa18.67■□□□□ 0.58
LINC02560-201ENST00000596379 SCFD2Q8WU76 684 aa18.67■□□□□ 0.58
LINC02560-201ENST00000596379 PPP1R13LQ8WUF5 828 aa18.67■□□□□ 0.58
LINC02560-201ENST00000596379 RWDD1Q9H446 243 aaPredicted RBP18.67■□□□□ 0.58
LINC02560-201ENST00000596379 SLC4A7Q9Y6M7 1214 aa18.67■□□□□ 0.58
LINC02560-201ENST00000596379 SCN10AQ9Y5Y9 1956 aa18.66■□□□□ 0.58
LINC02560-201ENST00000596379 SCN5AQ14524 2016 aa18.66■□□□□ 0.58
LINC02560-201ENST00000596379 ZBBXA8MT70 800 aa18.66■□□□□ 0.58
LINC02560-201ENST00000596379 B4DLN1 442 aa18.66■□□□□ 0.58
LINC02560-201ENST00000596379 TXNP10599 105 aaKnown RBP18.66■□□□□ 0.58
LINC02560-201ENST00000596379 IGFBP4P22692 258 aa18.66■□□□□ 0.58
LINC02560-201ENST00000596379 MRPL12P52815 198 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms