RNA–Protein interactions for RNA: ENST00000596319.1

SAMD4B-205, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 2

Gene SAMD4B, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-205ENST00000596319 SNHG28P0DPA3 235 aa12.23□□□□□ -0.45
SAMD4B-205ENST00000596319 NUCB2P80303 420 aa12.23□□□□□ -0.45
SAMD4B-205ENST00000596319 ZNF543Q08ER8 600 aa12.23□□□□□ -0.45
SAMD4B-205ENST00000596319 TAPT1Q6NXT6 567 aa12.23□□□□□ -0.45
SAMD4B-205ENST00000596319 NSMFQ6X4W1 530 aa12.23□□□□□ -0.45
SAMD4B-205ENST00000596319 TBC1D10CQ8IV04 446 aa12.23□□□□□ -0.45
SAMD4B-205ENST00000596319 RUFY2Q8WXA3 655 aa12.23□□□□□ -0.45
SAMD4B-205ENST00000596319 ESR2Q92731 530 aa12.23□□□□□ -0.45
SAMD4B-205ENST00000596319 VTI1AQ96AJ9 217 aa12.23□□□□□ -0.45
SAMD4B-205ENST00000596319 FRMPD2Q68DX3 1309 aaPredicted RBP12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 ZNF213O14771 459 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 CABYRO75952 493 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 SMPD1P17405 629 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 EPHB4P54760 987 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 FPGSQ05932 587 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 BAATQ14032 418 aaPredicted RBP12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 CCDC178Q5BJE1 867 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 ZNF697Q5TEC3 545 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 NOL8Q76FK4 1167 aaKnown RBP12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 DGKHQ86XP1 1220 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 GUCD1Q96NT3 240 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 SEZ6LQ9BYH1 1024 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 AP5M1Q9H0R1 490 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 VTA1Q9NP79 307 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 ANO2Q9NQ90 1003 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 ADD3Q9UEY8 706 aaKnown RBP12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 CUL9Q8IWT3 2517 aa12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 LAMA2P24043 3122 aaKnown RBP12.22□□□□□ -0.45
SAMD4B-205ENST00000596319 WDR19Q8NEZ3 1342 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 RAD50Q92878 1312 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 MYO9BQ13459 2157 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 NFIBO00712 420 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 DYNC1LI2O43237 492 aaPredicted RBP12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 ZEB2O60315 1214 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 BEX3Q00994 111 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 FSCN1Q16658 493 aaKnown RBP12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 GPATCH4Q5T3I0 446 aaKnown RBP12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 MFSD5Q6N075 450 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 CWC27Q6UX04 472 aaKnown RBP12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 CLEC17AQ6ZS10 378 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 TLK2Q86UE8 772 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 FBXO16Q8IX29 292 aaPredicted RBP12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 FAM126BQ8IXS8 530 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 SLC43A3Q8NBI5 491 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 CLEC4DQ8WXI8 215 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 ANKS1AQ92625 1134 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 RNPC3Q96LT9 517 aaKnown RBP12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 PURBQ96QR8 312 aaKnown RBP12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 DSCC1Q9BVC3 393 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 PDGFCQ9NRA1 345 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 DIAPH3Q9NSV4 1193 aa12.21□□□□□ -0.45
SAMD4B-205ENST00000596319 LCTP09848 1927 aa12.21□□□□□ -0.46
SAMD4B-205ENST00000596319 NEDD4P46934 1319 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 RBM47A0AV96 593 aaKnown RBP12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 GOLGA6L22H0YM25 854 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 TLR3O15455 904 aaKnown RBP12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 SGSM2O43147 1006 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 CD4P01730 458 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 ALDH5A1P51649 535 aaPredicted RBP12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 SKOR2Q2VWA4 1001 aaPredicted RBP12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 CXCL17Q6UXB2 119 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 KIAA1211Q6ZU35 1233 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 EEPD1Q7L9B9 569 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 IQCA1Q86XH1 822 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 TNPO1Q92973 898 aaKnown RBP12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 MAF1Q9H063 256 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 SEMA6BQ9H3T3 888 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 CTNNA3Q9UI47 895 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 DDX49Q9Y6V7 483 aaKnown RBP12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 A0A0C4DFX4 3053 aa12.2□□□□□ -0.46
SAMD4B-205ENST00000596319 TMEM265A0A087WTH1 108 aa12.19□□□□□ -0.46
SAMD4B-205ENST00000596319 PTPDC1A2A3K4 754 aa12.19□□□□□ -0.46
SAMD4B-205ENST00000596319 HSPA4P34932 840 aa12.19□□□□□ -0.46
SAMD4B-205ENST00000596319 PPIGQ13427 754 aaKnown RBP eCLIP12.19□□□□□ -0.46
SAMD4B-205ENST00000596319 DUSP28Q4G0W2 176 aa12.19□□□□□ -0.46
SAMD4B-205ENST00000596319 L1TD1Q5T7N2 865 aaKnown RBP12.19□□□□□ -0.46
SAMD4B-205ENST00000596319 RGS22Q8NE09 1264 aa12.19□□□□□ -0.46
SAMD4B-205ENST00000596319 DNERQ8NFT8 737 aa12.19□□□□□ -0.46
SAMD4B-205ENST00000596319 GRIN2DO15399 1336 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 LRRC37A2A6NM11 1700 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 B4E1Z4 1266 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 TRAK2O60296 914 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 KDM4AO75164 1064 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 PTGS1P23219 599 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 EDNRBP24530 442 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 RPS6P62753 249 aaKnown RBP12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 ITGA7Q13683 1181 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 IMMTQ16891 758 aaKnown RBP12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 TMEM240Q5SV17 173 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 TMEM63BQ5T3F8 832 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 SLC30A10Q6XR72 485 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 RNF207Q6ZRF8 634 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 TMEM199Q8N511 208 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 PNMA1Q8ND90 353 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 FAM161BQ96MY7 647 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 ZSCAN10Q96SZ4 725 aaPredicted RBP12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 MPHOSPH6Q99547 160 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms