RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 PRRT2Q7Z6L0 340 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 UBE2Q1Q7Z7E8 422 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 PROCA1Q8NCQ7 364 aaPredicted RBP14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 CUL5Q93034 780 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 PSTPIP2Q9H939 334 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 RIC8AQ9NPQ8 531 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 PCDHA6Q9UN73 950 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 PCDHA8Q9Y5H6 950 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 NR2E3Q9Y5X4 410 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 PHIPQ8WWQ0 1821 aa14.94□□□□□ -0.02
SHKBP1-209ENST00000595803 FIBPO43427 364 aa14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 ATP2B1P20020 1258 aa14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 OSBPP22059 807 aa14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 PABPC4Q13310 644 aaKnown RBP eCLIP14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 NPY5RQ15761 445 aa14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 RILPL1Q5EBL4 403 aa14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 Q7L0L9 218 aa14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 CPXCR1Q8N123 301 aa14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 SPATA32Q96LK8 384 aa14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 USP28Q96RU2 1077 aa14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 GDPD2Q9HCC8 539 aa14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 BIN2Q9UBW5 565 aaPredicted RBP14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 MRPL11Q9Y3B7 192 aaKnown RBP14.93□□□□□ -0.02
SHKBP1-209ENST00000595803 ABCB11O95342 1321 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 HOXA7P31268 230 aaPredicted RBP14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 STK38Q15208 465 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 MTFR1Q15390 333 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 SF3A1Q15459 793 aaKnown RBP14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 JAKMIP3Q5VZ66 844 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 ANO1Q5XXA6 986 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 PIK3AP1Q6ZUJ8 805 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 KRT25Q7Z3Z0 450 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 TNFRSF25Q93038 417 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 ATG4CQ96DT6 458 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 SLC38A10Q9HBR0 1119 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 RTEL1Q9NZ71 1219 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 RCOR1Q9UKL0 485 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 CCPG1Q9ULG6 757 aa14.92□□□□□ -0.02
SHKBP1-209ENST00000595803 OTOFQ9HC10 1997 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 M0R2N6 131 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 VWA5AO00534 786 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 ADAMTS3O15072 1205 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 ICAM1P05362 532 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 CETPP11597 493 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 GTF2A2P52657 109 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 NBR1Q14596 966 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 TREML2Q5T2D2 321 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 MCTP2Q6DN12 878 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 GPR153Q6NV75 609 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 REXO1Q8N1G1 1221 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 RASGRP4Q8TDF6 673 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 AGBL1Q96MI9 1066 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 RAVER2Q9HCJ3 691 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 LMBRD1Q9NUN5 540 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 CLIC4Q9Y696 253 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 MYPNQ86TC9 1320 aa14.91□□□□□ -0.02
SHKBP1-209ENST00000595803 TESPA1A2RU30 521 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 TRAPPC10P48553 1259 aa14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 IRX3P78415 501 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 NONOQ15233 471 aaKnown RBP eCLIP14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 EARS2Q5JPH6 523 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 TMEM87AQ8NBN3 555 aa14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 LEO1Q8WVC0 666 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 ARHGAP39Q9C0H5 1083 aa14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 POLR3EQ9NVU0 708 aa14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 TMEM260Q9NX78 707 aa14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 ADAMTS5Q9UNA0 930 aa14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 CEP131Q9UPN4 1083 aa14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 AGTPBP1Q9UPW5 1226 aa14.9□□□□□ -0.02
SHKBP1-209ENST00000595803 GOLGA6L4A6NEF3 574 aa14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 FAM205CA6NFA0 338 aa14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 GCOM1H8Y6P7 765 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 YEATS4O95619 227 aa14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 POLR2MP0CAP2 368 aa14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 ALAS1P13196 640 aa14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 NASPP49321 788 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 TOB1P50616 345 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 OAZ1P54368 228 aa14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 TAF1CQ15572 869 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 UBE2SQ16763 222 aa14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 SKOR2Q2VWA4 1001 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 MCF2L2Q86YR7 1114 aa14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 TEX2Q8IWB9 1127 aa14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 P2RX7Q99572 595 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 PRDM6Q9NQX0 595 aa14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 ZNF536O15090 1300 aa14.89□□□□□ -0.03
SHKBP1-209ENST00000595803 TCHHQ07283 1943 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 SPDYE16A6NNV3 312 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 FOSP01100 380 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 GJA8P48165 433 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 SLC39A14Q15043 492 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 ZNF174Q15697 407 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 INF2Q27J81 1249 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 TPRNQ4KMQ1 711 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 TTC38Q5R3I4 469 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 GPAT2Q6NUI2 795 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 USP17L6PQ6QN14 398 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 LINC00301Q8NCQ3 95 aa14.88□□□□□ -0.03
SHKBP1-209ENST00000595803 KCNG4Q8TDN1 519 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms