RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 NKX3-2P78367 333 aa20.89■□□□□ 0.93
PNKP-206ENST00000595792 PNMA1Q8ND90 353 aa20.89■□□□□ 0.93
PNKP-206ENST00000595792 RNPC3Q96LT9 517 aaKnown RBP20.89■□□□□ 0.93
PNKP-206ENST00000595792 CDH23Q9H251 3354 aa20.89■□□□□ 0.93
PNKP-206ENST00000595792 SEC23AQ15436 765 aa20.88■□□□□ 0.93
PNKP-206ENST00000595792 FSCN1Q16658 493 aaKnown RBP20.88■□□□□ 0.93
PNKP-206ENST00000595792 USH1GQ495M9 461 aa20.88■□□□□ 0.93
PNKP-206ENST00000595792 KIAA1211Q6ZU35 1233 aa20.88■□□□□ 0.93
PNKP-206ENST00000595792 STOX1Q6ZVD7 989 aa20.88■□□□□ 0.93
PNKP-206ENST00000595792 IQCA1Q86XH1 822 aa20.88■□□□□ 0.93
PNKP-206ENST00000595792 FAM126BQ8IXS8 530 aa20.88■□□□□ 0.93
PNKP-206ENST00000595792 MORC4Q8TE76 937 aa20.88■□□□□ 0.93
PNKP-206ENST00000595792 RUFY2Q8WXA3 655 aa20.88■□□□□ 0.93
PNKP-206ENST00000595792 PPP1R12CQ9BZL4 782 aa20.88■□□□□ 0.93
PNKP-206ENST00000595792 VTA1Q9NP79 307 aa20.88■□□□□ 0.93
PNKP-206ENST00000595792 MROH7Q68CQ1 1323 aa20.87■□□□□ 0.93
PNKP-206ENST00000595792 TIMP1P01033 207 aa20.87■□□□□ 0.93
PNKP-206ENST00000595792 ZNF697Q5TEC3 545 aa20.87■□□□□ 0.93
PNKP-206ENST00000595792 FAM109BQ6ICB4 259 aaPredicted RBP20.87■□□□□ 0.93
PNKP-206ENST00000595792 KRT23Q9C075 422 aa20.87■□□□□ 0.93
PNKP-206ENST00000595792 AP5M1Q9H0R1 490 aa20.87■□□□□ 0.93
PNKP-206ENST00000595792 GRIN2DO15399 1336 aa20.86■□□□□ 0.93
PNKP-206ENST00000595792 WDR19Q8NEZ3 1342 aa20.86■□□□□ 0.93
PNKP-206ENST00000595792 NT5C2P49902 561 aa20.86■□□□□ 0.93
PNKP-206ENST00000595792 PSMC6P62333 389 aa20.86■□□□□ 0.93
PNKP-206ENST00000595792 RPS6P62753 249 aaKnown RBP20.86■□□□□ 0.93
PNKP-206ENST00000595792 IQSEC1Q6DN90 963 aa20.86■□□□□ 0.93
PNKP-206ENST00000595792 RNF207Q6ZRF8 634 aa20.86■□□□□ 0.93
PNKP-206ENST00000595792 KAT14Q9H8E8 782 aa20.86■□□□□ 0.93
PNKP-206ENST00000595792 CNNM2Q9H8M5 875 aa20.86■□□□□ 0.93
PNKP-206ENST00000595792 SENP2Q9HC62 589 aa20.86■□□□□ 0.93
PNKP-206ENST00000595792 ADD3Q9UEY8 706 aaKnown RBP20.86■□□□□ 0.93
PNKP-206ENST00000595792 KIAA1217Q5T5P2 1943 aa20.86■□□□□ 0.93
PNKP-206ENST00000595792 COL9A3Q14050 684 aaPredicted RBP20.85■□□□□ 0.93
PNKP-206ENST00000595792 CDC37Q16543 378 aaPredicted RBP20.85■□□□□ 0.93
PNKP-206ENST00000595792 GPATCH4Q5T3I0 446 aaKnown RBP20.85■□□□□ 0.93
PNKP-206ENST00000595792 MAP4K1Q92918 833 aa20.85■□□□□ 0.93
PNKP-206ENST00000595792 TTYH1Q9H313 450 aaPredicted RBP20.85■□□□□ 0.93
PNKP-206ENST00000595792 UMODL1Q5DID0 1318 aa20.84■□□□□ 0.93
PNKP-206ENST00000595792 CSF2RAP15509 400 aa20.84■□□□□ 0.93
PNKP-206ENST00000595792 SMAD3P84022 425 aaKnown RBP20.84■□□□□ 0.93
PNKP-206ENST00000595792 ITGA7Q13683 1181 aa20.84■□□□□ 0.93
PNKP-206ENST00000595792 CCDC178Q5BJE1 867 aa20.84■□□□□ 0.93
PNKP-206ENST00000595792 MFSD5Q6N075 450 aa20.84■□□□□ 0.93
PNKP-206ENST00000595792 STAG2Q8N3U4 1231 aa20.84■□□□□ 0.93
PNKP-206ENST00000595792 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.84■□□□□ 0.937e-9■■■■■ 42.7
PNKP-206ENST00000595792 WDR11Q9BZH6 1224 aa20.84■□□□□ 0.93
PNKP-206ENST00000595792 U3KPZ7 1027 aaPredicted RBP20.84■□□□□ 0.93
PNKP-206ENST00000595792 UNC80Q8N2C7 3258 aa20.84■□□□□ 0.93
PNKP-206ENST00000595792 E7EWF7 191 aa20.83■□□□□ 0.93
PNKP-206ENST00000595792 TLR3O15455 904 aaKnown RBP20.83■□□□□ 0.93
PNKP-206ENST00000595792 CD4P01730 458 aa20.83■□□□□ 0.93
PNKP-206ENST00000595792 CYP2C18P33260 490 aa20.83■□□□□ 0.93
PNKP-206ENST00000595792 DUSP28Q4G0W2 176 aa20.83■□□□□ 0.93
PNKP-206ENST00000595792 C16orf59Q7L2K0 433 aa20.83■□□□□ 0.93
PNKP-206ENST00000595792 CENPQQ7L2Z9 268 aaPredicted RBP20.83■□□□□ 0.93
PNKP-206ENST00000595792 ADGRF4Q8IZF3 695 aa20.83■□□□□ 0.93
PNKP-206ENST00000595792 SLC43A3Q8NBI5 491 aa20.83■□□□□ 0.93
PNKP-206ENST00000595792 PPP1R13LQ8WUF5 828 aa20.83■□□□□ 0.93
PNKP-206ENST00000595792 TBC1D5Q92609 795 aa20.83■□□□□ 0.93
PNKP-206ENST00000595792 LSG1Q9H089 658 aaKnown RBP20.83■□□□□ 0.93
PNKP-206ENST00000595792 RBM8AQ9Y5S9 174 aaKnown RBP20.83■□□□□ 0.93
PNKP-206ENST00000595792 ACRP10323 421 aa20.82■□□□□ 0.92
PNKP-206ENST00000595792 ANTXR2P58335 489 aa20.82■□□□□ 0.92
PNKP-206ENST00000595792 PDE4DQ08499 809 aa20.82■□□□□ 0.92
PNKP-206ENST00000595792 SLC35G1Q2M3R5 365 aa20.82■□□□□ 0.92
PNKP-206ENST00000595792 CHST3Q7LGC8 479 aa20.82■□□□□ 0.92
PNKP-206ENST00000595792 COPS5Q92905 334 aa20.82■□□□□ 0.92
PNKP-206ENST00000595792 CDX2Q99626 313 aaPredicted RBP20.82■□□□□ 0.92
PNKP-206ENST00000595792 ESYT1Q9BSJ8 1104 aa20.82■□□□□ 0.92
PNKP-206ENST00000595792 UBAC1Q9BSL1 405 aa20.82■□□□□ 0.92
PNKP-206ENST00000595792 TRPV6Q9H1D0 765 aa20.82■□□□□ 0.92
PNKP-206ENST00000595792 SEMA6BQ9H3T3 888 aa20.82■□□□□ 0.92
PNKP-206ENST00000595792 MYH7BA7E2Y1 1941 aa20.82■□□□□ 0.92
PNKP-206ENST00000595792 B4GALT4O60513 344 aa20.81■□□□□ 0.92
PNKP-206ENST00000595792 CABYRO75952 493 aa20.81■□□□□ 0.92
PNKP-206ENST00000595792 EDNRBP24530 442 aa20.81■□□□□ 0.92
PNKP-206ENST00000595792 ASPRV1Q53RT3 343 aa20.81■□□□□ 0.92
PNKP-206ENST00000595792 IFIT1BQ5T764 474 aaKnown RBP20.81■□□□□ 0.92
PNKP-206ENST00000595792 OR6J1Q8NGC5 347 aa20.81■□□□□ 0.92
PNKP-206ENST00000595792 JMJD4Q9H9V9 463 aa20.81■□□□□ 0.92
PNKP-206ENST00000595792 VAT1LQ9HCJ6 419 aa20.81■□□□□ 0.92
PNKP-206ENST00000595792 COL20A1Q9P218 1284 aa20.81■□□□□ 0.92
PNKP-206ENST00000595792 Q9Y3F1 56 aa20.81■□□□□ 0.92
PNKP-206ENST00000595792 RBM47A0AV96 593 aaKnown RBP20.8■□□□□ 0.92
PNKP-206ENST00000595792 DHX16O60231 1041 aaKnown RBP20.8■□□□□ 0.92
PNKP-206ENST00000595792 ZEB2O60315 1214 aa20.8■□□□□ 0.92
PNKP-206ENST00000595792 MYL3P08590 195 aa20.8■□□□□ 0.92
PNKP-206ENST00000595792 PPIGQ13427 754 aaKnown RBP eCLIP20.8■□□□□ 0.922e-7■■■□□ 18.9
PNKP-206ENST00000595792 QRICH1Q2TAL8 776 aa20.8■□□□□ 0.92
PNKP-206ENST00000595792 TMEM240Q5SV17 173 aa20.8■□□□□ 0.92
PNKP-206ENST00000595792 MB21D2Q8IYB1 491 aaPredicted RBP20.8■□□□□ 0.92
PNKP-206ENST00000595792 MYLIPQ8WY64 445 aa20.8■□□□□ 0.92
PNKP-206ENST00000595792 MAD2L2Q9UI95 211 aa20.8■□□□□ 0.92
PNKP-206ENST00000595792 PNMA2Q9UL42 364 aa20.8■□□□□ 0.92
PNKP-206ENST00000595792 GRXCR1A8MXD5 290 aa20.79■□□□□ 0.92
PNKP-206ENST00000595792 ARIH2O95376 493 aa20.79■□□□□ 0.92
PNKP-206ENST00000595792 PARP1P09874 1014 aaKnown RBP20.79■□□□□ 0.92
PNKP-206ENST00000595792 TMEM199Q8N511 208 aa20.79■□□□□ 0.92
PNKP-206ENST00000595792 HIPK3Q9H422 1215 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms