RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 RAD50Q92878 1312 aa20.98■□□□□ 0.95
HOMER3-208ENST00000595756 PTPDC1A2A3K4 754 aa20.97■□□□□ 0.95
HOMER3-208ENST00000595756 TLR3O15455 904 aaKnown RBP20.97■□□□□ 0.95
HOMER3-208ENST00000595756 EPHB4P54760 987 aa20.97■□□□□ 0.95
HOMER3-208ENST00000595756 EEPD1Q7L9B9 569 aa20.97■□□□□ 0.95
HOMER3-208ENST00000595756 ANKS1AQ92625 1134 aa20.97■□□□□ 0.95
HOMER3-208ENST00000595756 VTI1AQ96AJ9 217 aa20.97■□□□□ 0.95
HOMER3-208ENST00000595756 RNPC3Q96LT9 517 aaKnown RBP20.97■□□□□ 0.95
HOMER3-208ENST00000595756 GUCD1Q96NT3 240 aa20.97■□□□□ 0.95
HOMER3-208ENST00000595756 SEZ6LQ9BYH1 1024 aa20.97■□□□□ 0.95
HOMER3-208ENST00000595756 PDGFCQ9NRA1 345 aa20.97■□□□□ 0.95
HOMER3-208ENST00000595756 ZEB2O60315 1214 aa20.96■□□□□ 0.95
HOMER3-208ENST00000595756 MFSD5Q6N075 450 aa20.96■□□□□ 0.95
HOMER3-208ENST00000595756 RNF207Q6ZRF8 634 aa20.96■□□□□ 0.95
HOMER3-208ENST00000595756 SLC43A3Q8NBI5 491 aa20.96■□□□□ 0.95
HOMER3-208ENST00000595756 SLC17A8Q8NDX2 589 aa20.96■□□□□ 0.95
HOMER3-208ENST00000595756 ZSCAN10Q96SZ4 725 aaPredicted RBP20.96■□□□□ 0.95
HOMER3-208ENST00000595756 MAF1Q9H063 256 aa20.96■□□□□ 0.95
HOMER3-208ENST00000595756 KAT14Q9H8E8 782 aa20.96■□□□□ 0.95
HOMER3-208ENST00000595756 CNNM2Q9H8M5 875 aa20.96■□□□□ 0.95
HOMER3-208ENST00000595756 B4E1Z4 1266 aa20.95■□□□□ 0.94
HOMER3-208ENST00000595756 GSPT1P15170 499 aaKnown RBP20.95■□□□□ 0.94
HOMER3-208ENST00000595756 DUSP28Q4G0W2 176 aa20.95■□□□□ 0.94
HOMER3-208ENST00000595756 ASPRV1Q53RT3 343 aa20.95■□□□□ 0.94
HOMER3-208ENST00000595756 CXCL17Q6UXB2 119 aa20.95■□□□□ 0.94
HOMER3-208ENST00000595756 KIAA1211Q6ZU35 1233 aa20.95■□□□□ 0.94
HOMER3-208ENST00000595756 ENAHQ8N8S7 591 aaPredicted RBP20.95■□□□□ 0.94
HOMER3-208ENST00000595756 DNERQ8NFT8 737 aa20.95■□□□□ 0.94
HOMER3-208ENST00000595756 MPHOSPH6Q99547 160 aaKnown RBP20.95■□□□□ 0.94
HOMER3-208ENST00000595756 KRT23Q9C075 422 aa20.95■□□□□ 0.94
HOMER3-208ENST00000595756 TNKSO95271 1327 aa20.95■□□□□ 0.94
HOMER3-208ENST00000595756 RBM47A0AV96 593 aaKnown RBP20.94■□□□□ 0.94
HOMER3-208ENST00000595756 DYNC1LI2O43237 492 aaPredicted RBP20.94■□□□□ 0.94
HOMER3-208ENST00000595756 CD4P01730 458 aa20.94■□□□□ 0.94
HOMER3-208ENST00000595756 GOLGA8HP0CJ92 632 aa20.94■□□□□ 0.94
HOMER3-208ENST00000595756 EDNRBP24530 442 aa20.94■□□□□ 0.94
HOMER3-208ENST00000595756 CALML3P27482 149 aa20.94■□□□□ 0.94
HOMER3-208ENST00000595756 RPS6P62753 249 aaKnown RBP20.94■□□□□ 0.94
HOMER3-208ENST00000595756 IL25Q9H293 177 aa20.94■□□□□ 0.94
HOMER3-208ENST00000595756 TMEM265A0A087WTH1 108 aa20.93■□□□□ 0.94
HOMER3-208ENST00000595756 PTGS1P23219 599 aa20.93■□□□□ 0.94
HOMER3-208ENST00000595756 PPIGQ13427 754 aaKnown RBP eCLIP20.93■□□□□ 0.942e-6■■□□□ 14.4
HOMER3-208ENST00000595756 CDC37Q16543 378 aaPredicted RBP20.93■□□□□ 0.94
HOMER3-208ENST00000595756 RGS22Q8NE09 1264 aa20.93■□□□□ 0.94
HOMER3-208ENST00000595756 ZSWIM5Q9P217 1185 aa20.93■□□□□ 0.94
HOMER3-208ENST00000595756 SCN10AQ9Y5Y9 1956 aa20.92■□□□□ 0.94
HOMER3-208ENST00000595756 ITGA7Q13683 1181 aa20.92■□□□□ 0.94
HOMER3-208ENST00000595756 USH1GQ495M9 461 aa20.92■□□□□ 0.94
HOMER3-208ENST00000595756 TMEM63BQ5T3F8 832 aa20.92■□□□□ 0.94
HOMER3-208ENST00000595756 TMEM199Q8N511 208 aa20.92■□□□□ 0.94
HOMER3-208ENST00000595756 UBAC1Q9BSL1 405 aa20.92■□□□□ 0.94
HOMER3-208ENST00000595756 WDR11Q9BZH6 1224 aa20.92■□□□□ 0.94
HOMER3-208ENST00000595756 UBA5Q9GZZ9 404 aa20.92■□□□□ 0.94
HOMER3-208ENST00000595756 CPVLQ9H3G5 476 aa20.92■□□□□ 0.94
HOMER3-208ENST00000595756 ABCB11O95342 1321 aa20.92■□□□□ 0.94
HOMER3-208ENST00000595756 B4DLN1 442 aa20.91■□□□□ 0.94
HOMER3-208ENST00000595756 NKRFO15226 690 aaKnown RBP eCLIP20.91■□□□□ 0.94
HOMER3-208ENST00000595756 GRIN2DO15399 1336 aa20.91■□□□□ 0.94
HOMER3-208ENST00000595756 CPT1AP50416 773 aa20.91■□□□□ 0.94
HOMER3-208ENST00000595756 MRPL12P52815 198 aaKnown RBP20.91■□□□□ 0.94
HOMER3-208ENST00000595756 PDE4DQ08499 809 aa20.91■□□□□ 0.94
HOMER3-208ENST00000595756 BMP2KLQ5H9B9 411 aa20.91■□□□□ 0.94
HOMER3-208ENST00000595756 KIAA1217Q5T5P2 1943 aa20.91■□□□□ 0.94
HOMER3-208ENST00000595756 RUFY2Q8WXA3 655 aa20.91■□□□□ 0.94
HOMER3-208ENST00000595756 FAM161BQ96MY7 647 aa20.91■□□□□ 0.94
HOMER3-208ENST00000595756 POLR3EQ9NVU0 708 aa20.91■□□□□ 0.94
HOMER3-208ENST00000595756 PRUNE2Q8WUY3 3088 aa20.9■□□□□ 0.94
HOMER3-208ENST00000595756 PARP1P09874 1014 aaKnown RBP20.9■□□□□ 0.94
HOMER3-208ENST00000595756 PPP2R5BQ15173 497 aa20.9■□□□□ 0.94
HOMER3-208ENST00000595756 PSRC1Q6PGN9 363 aaPredicted RBP20.9■□□□□ 0.94
HOMER3-208ENST00000595756 ADGRF4Q8IZF3 695 aa20.9■□□□□ 0.94
HOMER3-208ENST00000595756 SCFD2Q8WU76 684 aa20.9■□□□□ 0.94
HOMER3-208ENST00000595756 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.9■□□□□ 0.94
HOMER3-208ENST00000595756 PPP1R12CQ9BZL4 782 aa20.9■□□□□ 0.94
HOMER3-208ENST00000595756 CSF2RAP15509 400 aa20.89■□□□□ 0.93
HOMER3-208ENST00000595756 IFIT1BQ5T764 474 aaKnown RBP20.89■□□□□ 0.93
HOMER3-208ENST00000595756 OR6J1Q8NGC5 347 aa20.89■□□□□ 0.93
HOMER3-208ENST00000595756 TTYH1Q9H313 450 aaPredicted RBP20.89■□□□□ 0.93
HOMER3-208ENST00000595756 SEMA6BQ9H3T3 888 aa20.89■□□□□ 0.93
HOMER3-208ENST00000595756 TANC1Q9C0D5 1861 aa20.89■□□□□ 0.93
HOMER3-208ENST00000595756 CHD9Q3L8U1 2897 aa20.88■□□□□ 0.93
HOMER3-208ENST00000595756 B4GALT4O60513 344 aa20.88■□□□□ 0.93
HOMER3-208ENST00000595756 PURAQ00577 322 aaKnown RBP20.88■□□□□ 0.93
HOMER3-208ENST00000595756 QRICH1Q2TAL8 776 aa20.88■□□□□ 0.93
HOMER3-208ENST00000595756 TMEM240Q5SV17 173 aa20.88■□□□□ 0.93
HOMER3-208ENST00000595756 RASIP1Q5U651 963 aa20.88■□□□□ 0.93
HOMER3-208ENST00000595756 HIPK3Q9H422 1215 aa20.88■□□□□ 0.93
HOMER3-208ENST00000595756 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.87■□□□□ 0.93
HOMER3-208ENST00000595756 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.87■□□□□ 0.93
HOMER3-208ENST00000595756 PSMC6P62333 389 aa20.87■□□□□ 0.93
HOMER3-208ENST00000595756 SEC23AQ15436 765 aa20.87■□□□□ 0.93
HOMER3-208ENST00000595756 BRDTQ58F21 947 aaPredicted RBP20.87■□□□□ 0.93
HOMER3-208ENST00000595756 C16orf59Q7L2K0 433 aa20.87■□□□□ 0.93
HOMER3-208ENST00000595756 MCF2L2Q86YR7 1114 aa20.87■□□□□ 0.93
HOMER3-208ENST00000595756 CDX2Q99626 313 aaPredicted RBP20.87■□□□□ 0.93
HOMER3-208ENST00000595756 JMJD4Q9H9V9 463 aa20.87■□□□□ 0.93
HOMER3-208ENST00000595756 CUL9Q8IWT3 2517 aa20.87■□□□□ 0.93
HOMER3-208ENST00000595756 VCANP13611 3396 aa20.86■□□□□ 0.93
HOMER3-208ENST00000595756 DHX16O60231 1041 aaKnown RBP20.86■□□□□ 0.93
HOMER3-208ENST00000595756 CHMLP26374 656 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms