RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CCNT1O60563 726 aaKnown RBP17.27■□□□□ 0.36
VRK3-207ENST00000594092 CELF2O95319 508 aaKnown RBP17.27■□□□□ 0.36
VRK3-207ENST00000594092 GJA5P36382 358 aa17.27■□□□□ 0.36
VRK3-207ENST00000594092 SNW1Q13573 536 aaKnown RBP17.27■□□□□ 0.36
VRK3-207ENST00000594092 MCTP2Q6DN12 878 aa17.27■□□□□ 0.36
VRK3-207ENST00000594092 GADL1Q6ZQY3 521 aa17.27■□□□□ 0.36
VRK3-207ENST00000594092 REPS2Q8NFH8 660 aa17.27■□□□□ 0.36
VRK3-207ENST00000594092 TBC1D5Q92609 795 aa17.27■□□□□ 0.36
VRK3-207ENST00000594092 ANO3Q9BYT9 981 aa17.27■□□□□ 0.36
VRK3-207ENST00000594092 NUP62CLQ9H1M0 184 aa17.27■□□□□ 0.36
VRK3-207ENST00000594092 HOXA13P31271 388 aaPredicted RBP17.26■□□□□ 0.35
VRK3-207ENST00000594092 FAM160A1Q05DH4 1040 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 RESP18Q5W5W9 173 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 ZNF579Q8NAF0 562 aaKnown RBP17.26■□□□□ 0.35
VRK3-207ENST00000594092 FERMT2Q96AC1 680 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 HOXC10Q9NYD6 342 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 SPDYE16A6NNV3 312 aaPredicted RBP17.26■□□□□ 0.35
VRK3-207ENST00000594092 ITGBL1O95965 494 aaPredicted RBP17.26■□□□□ 0.35
VRK3-207ENST00000594092 CFBP00751 764 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 FOSP01100 380 aaPredicted RBP17.26■□□□□ 0.35
VRK3-207ENST00000594092 MRE11P49959 708 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 NDUFA8P51970 172 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 ORC2Q13416 577 aaPredicted RBP17.26■□□□□ 0.35
VRK3-207ENST00000594092 C2orf69Q8N8R5 385 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 CLEC4DQ8WXI8 215 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 TMEM60Q9H2L4 133 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 PNMA2Q9UL42 364 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 MYH7BA7E2Y1 1941 aa17.26■□□□□ 0.35
VRK3-207ENST00000594092 FAM237AA0A1B0GTK4 181 aa17.25■□□□□ 0.35
VRK3-207ENST00000594092 SPDYE3A6NKU9 549 aa17.25■□□□□ 0.35
VRK3-207ENST00000594092 GCOM1H8Y6P7 765 aaPredicted RBP17.25■□□□□ 0.35
VRK3-207ENST00000594092 POLR2MP0CAP2 368 aa17.25■□□□□ 0.35
VRK3-207ENST00000594092 ALAS1P13196 640 aa17.25■□□□□ 0.35
VRK3-207ENST00000594092 PFKFB1P16118 471 aa17.25■□□□□ 0.35
VRK3-207ENST00000594092 HOXA7P31268 230 aaPredicted RBP17.25■□□□□ 0.35
VRK3-207ENST00000594092 MOGSQ13724 837 aa17.25■□□□□ 0.35
VRK3-207ENST00000594092 SPECC1Q5M775 1068 aa17.25■□□□□ 0.35
VRK3-207ENST00000594092 ARL6IP4Q66PJ3 421 aaKnown RBP17.25■□□□□ 0.35
VRK3-207ENST00000594092 FMR1NBQ8N0W7 255 aaPredicted RBP17.25■□□□□ 0.35
VRK3-207ENST00000594092 CSRNP2Q9H175 543 aa17.25■□□□□ 0.35
VRK3-207ENST00000594092 HPSEQ9Y251 543 aa17.25■□□□□ 0.35
VRK3-207ENST00000594092 COL11A1P12107 1806 aaPredicted RBP17.24■□□□□ 0.35
VRK3-207ENST00000594092 NEMFO60524 1076 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 OAZ1P54368 228 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 TMEM132BQ14DG7 1078 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 IL17AQ16552 155 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 CRYGNQ8WXF5 182 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 CLSTN2Q9H4D0 955 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 GRPEL1Q9HAV7 217 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 ZNF214Q9UL59 606 aaPredicted RBP17.24■□□□□ 0.35
VRK3-207ENST00000594092 VWA3AA6NCI4 1184 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 LAD1O00515 517 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 NFIBO00712 420 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 ATP2A1O14983 1001 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 TDP2O95551 362 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 USP11P51784 963 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 MUM1L1Q5H9M0 696 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 CST9Q5W186 159 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 PPP4R3AQ6IN85 833 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 TNMDQ9H2S6 317 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 HOMER2Q9NSB8 354 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 AGTPBP1Q9UPW5 1226 aa17.24■□□□□ 0.35
VRK3-207ENST00000594092 SREBF1P36956 1147 aa17.23■□□□□ 0.35
VRK3-207ENST00000594092 PRPHP41219 470 aa17.23■□□□□ 0.35
VRK3-207ENST00000594092 HSD17B4P51659 736 aa17.23■□□□□ 0.35
VRK3-207ENST00000594092 ARHGAP4P98171 946 aa17.23■□□□□ 0.35
VRK3-207ENST00000594092 GHRHRQ02643 423 aa17.23■□□□□ 0.35
VRK3-207ENST00000594092 SNAPC2Q13487 334 aa17.23■□□□□ 0.35
VRK3-207ENST00000594092 FASTKD5Q7L8L6 764 aaKnown RBP17.23■□□□□ 0.35
VRK3-207ENST00000594092 FCHSD1Q86WN1 690 aa17.23■□□□□ 0.35
VRK3-207ENST00000594092 POTEDQ86YR6 584 aa17.23■□□□□ 0.35
VRK3-207ENST00000594092 MCF2L2Q86YR7 1114 aa17.23■□□□□ 0.35
VRK3-207ENST00000594092 TSPY26PQ9H489 355 aa17.23■□□□□ 0.35
VRK3-207ENST00000594092 RIPK3Q9Y572 518 aa17.23■□□□□ 0.35
VRK3-207ENST00000594092 SLC37A4O43826 429 aa17.22■□□□□ 0.35
VRK3-207ENST00000594092 KINO60870 393 aaKnown RBP17.22■□□□□ 0.35
VRK3-207ENST00000594092 OR52Z1P0C646 297 aa17.22■□□□□ 0.35
VRK3-207ENST00000594092 GCFC2P16383 781 aaKnown RBP17.22■□□□□ 0.35
VRK3-207ENST00000594092 CAMK4Q16566 473 aa17.22■□□□□ 0.35
VRK3-207ENST00000594092 SNRNP48Q6IEG0 339 aaKnown RBP17.22■□□□□ 0.35
VRK3-207ENST00000594092 POTEEQ6S8J3 1075 aa17.22■□□□□ 0.35
VRK3-207ENST00000594092 TRERF1Q96PN7 1200 aa17.22■□□□□ 0.35
VRK3-207ENST00000594092 NAP1L4Q99733 375 aaKnown RBP17.22■□□□□ 0.35
VRK3-207ENST00000594092 FAM13BQ9NYF5 915 aa17.22■□□□□ 0.35
VRK3-207ENST00000594092 ZNF202O95125 648 aa17.21■□□□□ 0.35
VRK3-207ENST00000594092 SYKP43405 635 aa17.21■□□□□ 0.35
VRK3-207ENST00000594092 IRX3P78415 501 aaPredicted RBP17.21■□□□□ 0.35
VRK3-207ENST00000594092 GPAT2Q6NUI2 795 aa17.21■□□□□ 0.35
VRK3-207ENST00000594092 DTHD1Q6ZMT9 781 aa17.21■□□□□ 0.35
VRK3-207ENST00000594092 USP49Q70CQ1 688 aa17.21■□□□□ 0.35
VRK3-207ENST00000594092 TEX13BQ9BXU2 312 aa17.21■□□□□ 0.35
VRK3-207ENST00000594092 ASCC2Q9H1I8 757 aaPredicted RBP17.21■□□□□ 0.35
VRK3-207ENST00000594092 CYP3A7-CYP3A51PA0A087WV96 503 aa17.21■□□□□ 0.35
VRK3-207ENST00000594092 CYP3A7P24462 503 aa17.21■□□□□ 0.35
VRK3-207ENST00000594092 LONP1P36776 959 aaKnown RBP17.21■□□□□ 0.35
VRK3-207ENST00000594092 MOXD1Q6UVY6 613 aa17.21■□□□□ 0.35
VRK3-207ENST00000594092 LBX2Q6XYB7 198 aa17.21■□□□□ 0.35
VRK3-207ENST00000594092 SAMD3Q8N6K7 520 aa17.21■□□□□ 0.35
VRK3-207ENST00000594092 EPSTI1Q96J88 318 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms