RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 CCDC39Q9UFE4 941 aa15.03■□□□□ -0
VRK3-205ENST00000593919 TRPM7Q96QT4 1865 aa15.03■□□□□ -0
VRK3-205ENST00000593919 A0A1B0GVL5 298 aa15.02■□□□□ -0
VRK3-205ENST00000593919 PTMAP06454 111 aaKnown RBP15.02■□□□□ -0
VRK3-205ENST00000593919 LETM2Q2VYF4 491 aa15.02■□□□□ -0
VRK3-205ENST00000593919 LDLRAD1Q5T700 205 aa15.02■□□□□ -0
VRK3-205ENST00000593919 SHC4Q6S5L8 630 aa15.02■□□□□ -0
VRK3-205ENST00000593919 CCDC73Q6ZRK6 1079 aa15.02■□□□□ -0
VRK3-205ENST00000593919 ATG4CQ96DT6 458 aa15.02■□□□□ -0
VRK3-205ENST00000593919 AGBL1Q96MI9 1066 aa15.02■□□□□ -0
VRK3-205ENST00000593919 CCPG1Q9ULG6 757 aa15.02■□□□□ -0
VRK3-205ENST00000593919 SRPRBQ9Y5M8 271 aaKnown RBP15.02■□□□□ -0
VRK3-205ENST00000593919 VWA5AO00534 786 aa15.02□□□□□ -0.01
VRK3-205ENST00000593919 CMA1P23946 247 aa15.02□□□□□ -0.01
VRK3-205ENST00000593919 FAM160A1Q05DH4 1040 aa15.02□□□□□ -0.01
VRK3-205ENST00000593919 TYRO3Q06418 890 aa15.02□□□□□ -0.01
VRK3-205ENST00000593919 SNW1Q13573 536 aaKnown RBP15.02□□□□□ -0.01
VRK3-205ENST00000593919 CATSPERGQ6ZRH7 1159 aa15.02□□□□□ -0.01
VRK3-205ENST00000593919 CPXCR1Q8N123 301 aa15.02□□□□□ -0.01
VRK3-205ENST00000593919 OPTNQ96CV9 577 aa15.02□□□□□ -0.01
VRK3-205ENST00000593919 ABCB11O95342 1321 aa15.01□□□□□ -0.01
VRK3-205ENST00000593919 A0A0G2JLL6 359 aaPredicted RBP15.01□□□□□ -0.01
VRK3-205ENST00000593919 EDIL3O43854 480 aa15.01□□□□□ -0.01
VRK3-205ENST00000593919 CCNT1O60563 726 aaKnown RBP15.01□□□□□ -0.01
VRK3-205ENST00000593919 NDUFA8P51970 172 aa15.01□□□□□ -0.01
VRK3-205ENST00000593919 PPIL2Q13356 520 aa15.01□□□□□ -0.01
VRK3-205ENST00000593919 AP3B2Q13367 1082 aa15.01□□□□□ -0.01
VRK3-205ENST00000593919 SPECC1Q5M775 1068 aa15.01□□□□□ -0.01
VRK3-205ENST00000593919 TREML2Q5T2D2 321 aa15.01□□□□□ -0.01
VRK3-205ENST00000593919 PRRT2Q7Z6L0 340 aaPredicted RBP15.01□□□□□ -0.01
VRK3-205ENST00000593919 ENGASEQ8NFI3 743 aa15.01□□□□□ -0.01
VRK3-205ENST00000593919 P2RX7Q99572 595 aaKnown RBP15.01□□□□□ -0.01
VRK3-205ENST00000593919 RAVER2Q9HCJ3 691 aaKnown RBP15.01□□□□□ -0.01
VRK3-205ENST00000593919 MRPL11Q9Y3B7 192 aaKnown RBP15.01□□□□□ -0.01
VRK3-205ENST00000593919 PIK3CDO00329 1044 aa15□□□□□ -0.01
VRK3-205ENST00000593919 ADCY5O95622 1261 aa15□□□□□ -0.01
VRK3-205ENST00000593919 CFBP00751 764 aa15□□□□□ -0.01
VRK3-205ENST00000593919 FDX1P10109 184 aa15□□□□□ -0.01
VRK3-205ENST00000593919 PFKFB1P16118 471 aa15□□□□□ -0.01
VRK3-205ENST00000593919 HOXA13P31271 388 aaPredicted RBP15□□□□□ -0.01
VRK3-205ENST00000593919 DSG3P32926 999 aa15□□□□□ -0.01
VRK3-205ENST00000593919 COG2Q14746 738 aa15□□□□□ -0.01
VRK3-205ENST00000593919 RESP18Q5W5W9 173 aa15□□□□□ -0.01
VRK3-205ENST00000593919 C4orf32Q8N8J7 132 aa15□□□□□ -0.01
VRK3-205ENST00000593919 FERMT2Q96AC1 680 aa15□□□□□ -0.01
VRK3-205ENST00000593919 ANO3Q9BYT9 981 aa15□□□□□ -0.01
VRK3-205ENST00000593919 KCNH4Q9UQ05 1017 aa15□□□□□ -0.01
VRK3-205ENST00000593919 ZBED4O75132 1171 aa15□□□□□ -0.01
VRK3-205ENST00000593919 FMR1NBQ8N0W7 255 aaPredicted RBP15□□□□□ -0.01
VRK3-205ENST00000593919 PROCA1Q8NCQ7 364 aaPredicted RBP15□□□□□ -0.01
VRK3-205ENST00000593919 TBC1D5Q92609 795 aa15□□□□□ -0.01
VRK3-205ENST00000593919 CSRNP2Q9H175 543 aa15□□□□□ -0.01
VRK3-205ENST00000593919 TMEM60Q9H2L4 133 aa15□□□□□ -0.01
VRK3-205ENST00000593919 ADAMTS5Q9UNA0 930 aa15□□□□□ -0.01
VRK3-205ENST00000593919 CTDP1Q9Y5B0 961 aaPredicted RBP15□□□□□ -0.01
VRK3-205ENST00000593919 A0A0G2JMZ2 1700 aa14.99□□□□□ -0.01
VRK3-205ENST00000593919 CXCL11O14625 94 aa14.99□□□□□ -0.01
VRK3-205ENST00000593919 NEMFO60524 1076 aa14.99□□□□□ -0.01
VRK3-205ENST00000593919 CELF2O95319 508 aaKnown RBP14.99□□□□□ -0.01
VRK3-205ENST00000593919 GJA5P36382 358 aa14.99□□□□□ -0.01
VRK3-205ENST00000593919 ARL6IP4Q66PJ3 421 aaKnown RBP14.99□□□□□ -0.01
VRK3-205ENST00000593919 GADL1Q6ZQY3 521 aa14.99□□□□□ -0.01
VRK3-205ENST00000593919 ZNF579Q8NAF0 562 aaKnown RBP14.99□□□□□ -0.01
VRK3-205ENST00000593919 GBA2Q9HCG7 927 aaPredicted RBP14.99□□□□□ -0.01
VRK3-205ENST00000593919 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.99□□□□□ -0.01
VRK3-205ENST00000593919 VWA3AA6NCI4 1184 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 SPDYE3A6NKU9 549 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 SPDYE16A6NNV3 312 aaPredicted RBP14.98□□□□□ -0.01
VRK3-205ENST00000593919 TDP2O95551 362 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 FOSP01100 380 aaPredicted RBP14.98□□□□□ -0.01
VRK3-205ENST00000593919 ATXN8OSP0DMR3 200 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 ALAS1P13196 640 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 FKBP1BP68106 108 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 ANO6Q4KMQ2 910 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 MCTP2Q6DN12 878 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 RBM43Q6ZSC3 357 aaKnown RBP14.98□□□□□ -0.01
VRK3-205ENST00000593919 TEX2Q8IWB9 1127 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 REPS2Q8NFH8 660 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 HOMER2Q9NSB8 354 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 HPSEQ9Y251 543 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 MYPNQ86TC9 1320 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 FAM237AA0A1B0GTK4 181 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 UNCXA6NJT0 531 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 GCOM1H8Y6P7 765 aaPredicted RBP14.98□□□□□ -0.01
VRK3-205ENST00000593919 LAD1O00515 517 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 NFIBO00712 420 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 SLC37A4O43826 429 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 KINO60870 393 aaKnown RBP14.98□□□□□ -0.01
VRK3-205ENST00000593919 POLR2MP0CAP2 368 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 ORC2Q13416 577 aaPredicted RBP14.98□□□□□ -0.01
VRK3-205ENST00000593919 IL17AQ16552 155 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 SASS6Q6UVJ0 657 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 POTEDQ86YR6 584 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 FAM200AQ8TCP9 573 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 CRYGNQ8WXF5 182 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 CLEC4DQ8WXI8 215 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 SLC10A4Q96EP9 437 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 ZNF214Q9UL59 606 aaPredicted RBP14.98□□□□□ -0.01
VRK3-205ENST00000593919 ZKSCAN5Q9Y2L8 839 aa14.98□□□□□ -0.01
VRK3-205ENST00000593919 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms