RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SEZ6LQ9BYH1 1024 aa17.37■□□□□ 0.37
PNKP-202ENST00000593706 RANBP17Q9H2T7 1088 aaKnown RBP17.37■□□□□ 0.37
PNKP-202ENST00000593706 PRDM12Q9H4Q4 367 aa17.37■□□□□ 0.37
PNKP-202ENST00000593706 UMODL1Q5DID0 1318 aa17.37■□□□□ 0.37
PNKP-202ENST00000593706 TCF20Q9UGU0 1960 aaKnown RBP17.37■□□□□ 0.37
PNKP-202ENST00000593706 B4GALT4O60513 344 aa17.36■□□□□ 0.37
PNKP-202ENST00000593706 FGBP02675 491 aa17.36■□□□□ 0.37
PNKP-202ENST00000593706 CCL23P55773 120 aa17.36■□□□□ 0.37
PNKP-202ENST00000593706 NUCB1Q02818 461 aa17.36■□□□□ 0.37
PNKP-202ENST00000593706 BAATQ14032 418 aaPredicted RBP17.36■□□□□ 0.37
PNKP-202ENST00000593706 SYDE2Q5VT97 1194 aa17.36■□□□□ 0.37
PNKP-202ENST00000593706 OTOP2Q7RTS6 562 aa17.36■□□□□ 0.37
PNKP-202ENST00000593706 HERVK_113Q902F9 699 aa17.36■□□□□ 0.37
PNKP-202ENST00000593706 TRPV6Q9H1D0 765 aa17.36■□□□□ 0.37
PNKP-202ENST00000593706 RWDD1Q9H446 243 aaPredicted RBP17.36■□□□□ 0.37
PNKP-202ENST00000593706 HELLSQ9NRZ9 838 aa17.36■□□□□ 0.37
PNKP-202ENST00000593706 Q9Y3F1 56 aa17.36■□□□□ 0.37
PNKP-202ENST00000593706 PTPRSQ13332 1948 aa17.36■□□□□ 0.37
PNKP-202ENST00000593706 FRMPD2Q68DX3 1309 aaPredicted RBP17.36■□□□□ 0.37
PNKP-202ENST00000593706 NFIBO00712 420 aa17.35■□□□□ 0.37
PNKP-202ENST00000593706 TOP1P11387 765 aaKnown RBP17.35■□□□□ 0.37
PNKP-202ENST00000593706 ALDH5A1P51649 535 aaPredicted RBP17.35■□□□□ 0.37
PNKP-202ENST00000593706 TJAP1Q5JTD0 557 aa17.35■□□□□ 0.37
PNKP-202ENST00000593706 TTBK2Q6IQ55 1244 aa17.35■□□□□ 0.37
PNKP-202ENST00000593706 NOC4LQ9BVI4 516 aaKnown RBP17.35■□□□□ 0.37
PNKP-202ENST00000593706 LNPKQ9C0E8 428 aa17.35■□□□□ 0.37
PNKP-202ENST00000593706 GPCPD1Q9NPB8 672 aa17.35■□□□□ 0.37
PNKP-202ENST00000593706 CXXC1Q9P0U4 656 aaPredicted RBP17.35■□□□□ 0.37
PNKP-202ENST00000593706 GRIN2DO15399 1336 aa17.35■□□□□ 0.37
PNKP-202ENST00000593706 TET1Q8NFU7 2136 aa17.35■□□□□ 0.37
PNKP-202ENST00000593706 CALML3P27482 149 aa17.34■□□□□ 0.37
PNKP-202ENST00000593706 CPT1AP50416 773 aa17.34■□□□□ 0.37
PNKP-202ENST00000593706 DUSP28Q4G0W2 176 aa17.34■□□□□ 0.37
PNKP-202ENST00000593706 TMEM63BQ5T3F8 832 aa17.34■□□□□ 0.37
PNKP-202ENST00000593706 CHD1LQ86WJ1 897 aa17.34■□□□□ 0.37
PNKP-202ENST00000593706 MPHOSPH6Q99547 160 aaKnown RBP17.34■□□□□ 0.37
PNKP-202ENST00000593706 TMEM47Q9BQJ4 181 aa17.34■□□□□ 0.37
PNKP-202ENST00000593706 WDR11Q9BZH6 1224 aa17.34■□□□□ 0.37
PNKP-202ENST00000593706 WNT8AQ9H1J5 351 aa17.34■□□□□ 0.37
PNKP-202ENST00000593706 NKX2-4Q9H2Z4 354 aa17.34■□□□□ 0.37
PNKP-202ENST00000593706 SLC28A3Q9HAS3 691 aa17.34■□□□□ 0.37
PNKP-202ENST00000593706 POLR3EQ9NVU0 708 aa17.34■□□□□ 0.37
PNKP-202ENST00000593706 RAD50Q92878 1312 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 A0A0D9SFI3 127 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 ZBBXA8MT70 800 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 MYL3P08590 195 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 NOVP48745 357 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 ALX1Q15699 326 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 MCMDC2Q4G0Z9 681 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 BTNL9Q6UXG8 535 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 SLC30A10Q6XR72 485 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 RPUSD2Q8IZ73 545 aaKnown RBP17.33■□□□□ 0.36
PNKP-202ENST00000593706 OR6J1Q8NGC5 347 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 MORC4Q8TE76 937 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 FAM227BQ96M60 508 aa17.33■□□□□ 0.36
PNKP-202ENST00000593706 ALDH8A1Q9H2A2 487 aaPredicted RBP17.33■□□□□ 0.36
PNKP-202ENST00000593706 GPHNQ9NQX3 736 aaPredicted RBP17.33■□□□□ 0.36
PNKP-202ENST00000593706 COL4A4P53420 1690 aaPredicted RBP17.32■□□□□ 0.36
PNKP-202ENST00000593706 ZMYM6O95789 1325 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 LOC102724159A0A0B4J2E5 919 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 FGAP02671 866 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 FGRP09769 529 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 IGFBP4P22692 258 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 HAND2P61296 217 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 PDE4DQ08499 809 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 PWP2Q15269 919 aaKnown RBP17.32■□□□□ 0.36
PNKP-202ENST00000593706 BRDTQ58F21 947 aaPredicted RBP17.32■□□□□ 0.36
PNKP-202ENST00000593706 AKNAD1Q5T1N1 836 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 RNF207Q6ZRF8 634 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 SCLYQ96I15 445 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 OSBPL3Q9H4L5 887 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 PRDM6Q9NQX0 595 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 THEGQ9P2T0 379 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 SLC4A7Q9Y6M7 1214 aa17.32■□□□□ 0.36
PNKP-202ENST00000593706 PRRC2BQ5JSZ5 2229 aaKnown RBP17.32■□□□□ 0.36
PNKP-202ENST00000593706 TNKSO95271 1327 aa17.31■□□□□ 0.36
PNKP-202ENST00000593706 SUPT20HL2P0C7V6 817 aa17.31■□□□□ 0.36
PNKP-202ENST00000593706 PDHBP11177 359 aa17.31■□□□□ 0.36
PNKP-202ENST00000593706 PURAQ00577 322 aaKnown RBP17.31■□□□□ 0.36
PNKP-202ENST00000593706 PPP2R5BQ15173 497 aa17.31■□□□□ 0.36
PNKP-202ENST00000593706 CCDC85BQ15834 202 aaPredicted RBP17.31■□□□□ 0.36
PNKP-202ENST00000593706 FAM47CQ5HY64 1035 aa17.31■□□□□ 0.36
PNKP-202ENST00000593706 PPP2R2DQ66LE6 453 aa17.31■□□□□ 0.36
PNKP-202ENST00000593706 TICAM2Q86XR7 235 aa17.31■□□□□ 0.36
PNKP-202ENST00000593706 PLEKHM2Q8IWE5 1019 aa17.31■□□□□ 0.36
PNKP-202ENST00000593706 TCP11L1Q9NUJ3 509 aa17.31■□□□□ 0.36
PNKP-202ENST00000593706 TRMT13Q9NUP7 481 aaKnown RBP17.31■□□□□ 0.36
PNKP-202ENST00000593706 PNMA2Q9UL42 364 aa17.31■□□□□ 0.36
PNKP-202ENST00000593706 YBX2Q9Y2T7 364 aaKnown RBP17.31■□□□□ 0.36
PNKP-202ENST00000593706 CCDC171Q6TFL3 1326 aa17.3■□□□□ 0.36
PNKP-202ENST00000593706 TRIM6-TRIM34B2RNG4 842 aa17.3■□□□□ 0.36
PNKP-202ENST00000593706 HSPD1P10809 573 aaKnown RBP17.3■□□□□ 0.36
PNKP-202ENST00000593706 CYP2C9P11712 490 aa17.3■□□□□ 0.36
PNKP-202ENST00000593706 RABGGTBP53611 331 aa17.3■□□□□ 0.36
PNKP-202ENST00000593706 ZNF543Q08ER8 600 aa17.3■□□□□ 0.36
PNKP-202ENST00000593706 NMIQ13287 307 aaPredicted RBP17.3■□□□□ 0.36
PNKP-202ENST00000593706 B4GALNT3Q6L9W6 998 aa17.3■□□□□ 0.36
PNKP-202ENST00000593706 MFSD6Q6ZSS7 791 aa17.3■□□□□ 0.36
PNKP-202ENST00000593706 ZNF589Q86UQ0 364 aaPredicted RBP17.3■□□□□ 0.36
PNKP-202ENST00000593706 MTG1Q9BT17 334 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms