RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 RASIP1Q5U651 963 aa26.65■■□□□ 1.86
SSBP4-203ENST00000593641 MFSD6Q6ZSS7 791 aa26.65■■□□□ 1.86
SSBP4-203ENST00000593641 RILPL2Q969X0 211 aa26.65■■□□□ 1.86
SSBP4-203ENST00000593641 LNPKQ9C0E8 428 aa26.65■■□□□ 1.86
SSBP4-203ENST00000593641 MFAP1P55081 439 aaKnown RBP26.64■■□□□ 1.86
SSBP4-203ENST00000593641 DUSP28Q4G0W2 176 aa26.64■■□□□ 1.86
SSBP4-203ENST00000593641 AKNAD1Q5T1N1 836 aa26.64■■□□□ 1.86
SSBP4-203ENST00000593641 TTC14Q96N46 770 aa26.64■■□□□ 1.86
SSBP4-203ENST00000593641 MPHOSPH6Q99547 160 aaKnown RBP26.64■■□□□ 1.86
SSBP4-203ENST00000593641 PBX4Q9BYU1 374 aa26.64■■□□□ 1.86
SSBP4-203ENST00000593641 RNF41Q9H4P4 317 aaPredicted RBP26.64■■□□□ 1.86
SSBP4-203ENST00000593641 CALML3P27482 149 aa26.63■■□□□ 1.85
SSBP4-203ENST00000593641 WDR11Q9BZH6 1224 aa26.63■■□□□ 1.85
SSBP4-203ENST00000593641 GBF1Q92538 1859 aa26.63■■□□□ 1.85
SSBP4-203ENST00000593641 GRIN2DO15399 1336 aa26.63■■□□□ 1.85
SSBP4-203ENST00000593641 GRXCR1A8MXD5 290 aa26.62■■□□□ 1.85
SSBP4-203ENST00000593641 B4GALT4O60513 344 aa26.62■■□□□ 1.85
SSBP4-203ENST00000593641 PSMC6P62333 389 aa26.62■■□□□ 1.85
SSBP4-203ENST00000593641 ZNF543Q08ER8 600 aa26.62■■□□□ 1.85
SSBP4-203ENST00000593641 TMEM63BQ5T3F8 832 aa26.62■■□□□ 1.85
SSBP4-203ENST00000593641 SLC30A10Q6XR72 485 aa26.62■■□□□ 1.85
SSBP4-203ENST00000593641 RNF207Q6ZRF8 634 aa26.62■■□□□ 1.85
SSBP4-203ENST00000593641 HERVK_113Q902F9 699 aa26.62■■□□□ 1.85
SSBP4-203ENST00000593641 TRPV6Q9H1D0 765 aa26.62■■□□□ 1.85
SSBP4-203ENST00000593641 TTC28Q96AY4 2481 aa26.62■■□□□ 1.85
SSBP4-203ENST00000593641 LAMA4Q16363 1823 aa26.62■■□□□ 1.85
SSBP4-203ENST00000593641 PBX2P40425 430 aa26.61■■□□□ 1.85
SSBP4-203ENST00000593641 CPT1AP50416 773 aa26.61■■□□□ 1.85
SSBP4-203ENST00000593641 GAS2L1Q99501 681 aaPredicted RBP26.61■■□□□ 1.85
SSBP4-203ENST00000593641 NOC4LQ9BVI4 516 aaKnown RBP26.61■■□□□ 1.85
SSBP4-203ENST00000593641 POLR3EQ9NVU0 708 aa26.61■■□□□ 1.85
SSBP4-203ENST00000593641 MSRAQ9UJ68 235 aa26.61■■□□□ 1.85
SSBP4-203ENST00000593641 UMODL1Q5DID0 1318 aa26.61■■□□□ 1.85
SSBP4-203ENST00000593641 WDR19Q8NEZ3 1342 aa26.61■■□□□ 1.85
SSBP4-203ENST00000593641 MYH6P13533 1939 aa26.61■■□□□ 1.85
SSBP4-203ENST00000593641 FGBP02675 491 aa26.6■■□□□ 1.85
SSBP4-203ENST00000593641 CCL23P55773 120 aa26.6■■□□□ 1.85
SSBP4-203ENST00000593641 AAMPQ13685 434 aa26.6■■□□□ 1.85
SSBP4-203ENST00000593641 RAB30Q15771 203 aa26.6■■□□□ 1.85
SSBP4-203ENST00000593641 TBC1D10CQ8IV04 446 aa26.6■■□□□ 1.85
SSBP4-203ENST00000593641 CLEC4DQ8WXI8 215 aa26.6■■□□□ 1.85
SSBP4-203ENST00000593641 ESR2Q92731 530 aa26.6■■□□□ 1.85
SSBP4-203ENST00000593641 PDE4DQ08499 809 aa26.59■■□□□ 1.85
SSBP4-203ENST00000593641 BRDTQ58F21 947 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-203ENST00000593641 GPATCH4Q5T3I0 446 aaKnown RBP26.59■■□□□ 1.85
SSBP4-203ENST00000593641 OR6J1Q8NGC5 347 aa26.59■■□□□ 1.85
SSBP4-203ENST00000593641 ALDH8A1Q9H2A2 487 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-203ENST00000593641 GPHNQ9NQX3 736 aaPredicted RBP26.59■■□□□ 1.85
SSBP4-203ENST00000593641 RAD50Q92878 1312 aa26.59■■□□□ 1.85
SSBP4-203ENST00000593641 SCN10AQ9Y5Y9 1956 aa26.58■■□□□ 1.85
SSBP4-203ENST00000593641 SNHG28P0DPA3 235 aa26.58■■□□□ 1.85
SSBP4-203ENST00000593641 RPS6P62753 249 aaKnown RBP26.58■■□□□ 1.85
SSBP4-203ENST00000593641 PPP2R5BQ15173 497 aa26.58■■□□□ 1.85
SSBP4-203ENST00000593641 B4GALNT3Q6L9W6 998 aa26.58■■□□□ 1.85
SSBP4-203ENST00000593641 OTOP2Q7RTS6 562 aa26.58■■□□□ 1.85
SSBP4-203ENST00000593641 RPUSD2Q8IZ73 545 aaKnown RBP26.58■■□□□ 1.85
SSBP4-203ENST00000593641 CXXC1Q9P0U4 656 aaPredicted RBP26.58■■□□□ 1.85
SSBP4-203ENST00000593641 SPTBN5Q9NRC6 3674 aaKnown RBP26.57■■□□□ 1.84
SSBP4-203ENST00000593641 RBM47A0AV96 593 aaKnown RBP26.57■■□□□ 1.84
SSBP4-203ENST00000593641 B4DLN1 442 aa26.57■■□□□ 1.84
SSBP4-203ENST00000593641 ZNF213O14771 459 aa26.57■■□□□ 1.84
SSBP4-203ENST00000593641 NKRFO15226 690 aaKnown RBP eCLIP26.57■■□□□ 1.84
SSBP4-203ENST00000593641 MYL3P08590 195 aa26.57■■□□□ 1.84
SSBP4-203ENST00000593641 SUPT20HL2P0C7V6 817 aa26.57■■□□□ 1.84
SSBP4-203ENST00000593641 SDSP20132 328 aa26.57■■□□□ 1.84
SSBP4-203ENST00000593641 NT5C2P49902 561 aa26.57■■□□□ 1.84
SSBP4-203ENST00000593641 MRPL12P52815 198 aaKnown RBP26.57■■□□□ 1.84
SSBP4-203ENST00000593641 PURAQ00577 322 aaKnown RBP26.57■■□□□ 1.84
SSBP4-203ENST00000593641 DNERQ8NFT8 737 aa26.57■■□□□ 1.84
SSBP4-203ENST00000593641 WNT8AQ9H1J5 351 aa26.57■■□□□ 1.84
SSBP4-203ENST00000593641 RWDD1Q9H446 243 aaPredicted RBP26.57■■□□□ 1.84
SSBP4-203ENST00000593641 NEDD4P46934 1319 aa26.57■■□□□ 1.84
SSBP4-203ENST00000593641 USH1GQ495M9 461 aa26.56■■□□□ 1.84
SSBP4-203ENST00000593641 IQCA1Q86XH1 822 aa26.56■■□□□ 1.84
SSBP4-203ENST00000593641 SMC5Q8IY18 1101 aa26.56■■□□□ 1.84
SSBP4-203ENST00000593641 SCFD2Q8WU76 684 aa26.56■■□□□ 1.84
SSBP4-203ENST00000593641 SYMPKQ92797 1274 aaKnown RBP26.56■■□□□ 1.84
SSBP4-203ENST00000593641 ZKSCAN3Q9BRR0 538 aa26.56■■□□□ 1.84
SSBP4-203ENST00000593641 CCDC178Q5BJE1 867 aa26.55■■□□□ 1.84
SSBP4-203ENST00000593641 DGKHQ86XP1 1220 aa26.55■■□□□ 1.84
SSBP4-203ENST00000593641 USP38Q8NB14 1042 aa26.55■■□□□ 1.84
SSBP4-203ENST00000593641 MTG1Q9BT17 334 aaPredicted RBP26.55■■□□□ 1.84
SSBP4-203ENST00000593641 PRDM12Q9H4Q4 367 aa26.55■■□□□ 1.84
SSBP4-203ENST00000593641 TRMT13Q9NUP7 481 aaKnown RBP26.55■■□□□ 1.84
SSBP4-203ENST00000593641 TNKSO95271 1327 aa26.55■■□□□ 1.84
SSBP4-203ENST00000593641 GOLGA8HP0CJ92 632 aa26.54■■□□□ 1.84
SSBP4-203ENST00000593641 EDNRBP24530 442 aa26.54■■□□□ 1.84
SSBP4-203ENST00000593641 FAM47CQ5HY64 1035 aa26.54■■□□□ 1.84
SSBP4-203ENST00000593641 SCLYQ96I15 445 aa26.54■■□□□ 1.84
SSBP4-203ENST00000593641 SLC28A3Q9HAS3 691 aa26.54■■□□□ 1.84
SSBP4-203ENST00000593641 DIAPH3Q9NSV4 1193 aa26.54■■□□□ 1.84
SSBP4-203ENST00000593641 CHD9Q3L8U1 2897 aa26.53■■□□□ 1.84
SSBP4-203ENST00000593641 SCN5AQ14524 2016 aa26.53■■□□□ 1.84
SSBP4-203ENST00000593641 PFKMP08237 780 aa26.53■■□□□ 1.84
SSBP4-203ENST00000593641 CWC27Q6UX04 472 aaKnown RBP26.53■■□□□ 1.84
SSBP4-203ENST00000593641 CHD1LQ86WJ1 897 aa26.53■■□□□ 1.84
SSBP4-203ENST00000593641 PNMA1Q8ND90 353 aa26.53■■□□□ 1.84
SSBP4-203ENST00000593641 NKX2-4Q9H2Z4 354 aa26.53■■□□□ 1.84
SSBP4-203ENST00000593641 SLC4A7Q9Y6M7 1214 aa26.53■■□□□ 1.84
SSBP4-203ENST00000593641 ZBBXA8MT70 800 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms