RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 TOMM22Q9NS69 142 aa13.27□□□□□ -0.29
PRKCSH-220ENST00000593104 THEGQ9P2T0 379 aa13.27□□□□□ -0.29
PRKCSH-220ENST00000593104 PTPDC1A2A3K4 754 aa13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 EPOPA6NHQ4 379 aa13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 SLC3A2P08195 630 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 MX1P20591 662 aa13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 CALML3P27482 149 aa13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 ALDH5A1P51649 535 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 RAB30Q15771 203 aa13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 TKFCQ3LXA3 575 aa13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 PPP2R2DQ66LE6 453 aa13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 TTC41PQ6P2S7 1318 aa13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 ASB2Q96Q27 587 aa13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 ALDH8A1Q9H2A2 487 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 RANBP17Q9H2T7 1088 aaKnown RBP13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 CPVLQ9H3G5 476 aa13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 SLC28A3Q9HAS3 691 aa13.26□□□□□ -0.29
PRKCSH-220ENST00000593104 CABYRO75952 493 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 ICAM1P05362 532 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 FDX1P10109 184 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 CHMP4BP1P59074 171 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 HAND2P61296 217 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 AKNAD1Q5T1N1 836 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 SYDE2Q5VT97 1194 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 IQSEC1Q6DN90 963 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 FAM227BQ96M60 508 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 TMEM47Q9BQJ4 181 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 WDR11Q9BZH6 1224 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 VTA1Q9NP79 307 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 SLC4A7Q9Y6M7 1214 aa13.25□□□□□ -0.29
PRKCSH-220ENST00000593104 TET1Q8NFU7 2136 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 TNKSO95271 1327 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 SALL3Q9BXA9 1300 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 PTPRSQ13332 1948 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 A0A0D9SFI3 127 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 ERC2O15083 957 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 ZEB2O60315 1214 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 PLA2G6O60733 806 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 CA3P07451 260 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 ATP2A2P16615 1042 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 KCNQ1P51787 676 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 PURAQ00577 322 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 DUSP28Q4G0W2 176 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 FAM47CQ5HY64 1035 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 TMCO2Q7Z6W1 182 aaPredicted RBP13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 OR6J1Q8NGC5 347 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 MORC4Q8TE76 937 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 ATXN2LQ8WWM7 1075 aaKnown RBP13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 CLEC4DQ8WXI8 215 aa13.24□□□□□ -0.29
PRKCSH-220ENST00000593104 ARIH2O95376 493 aa13.23□□□□□ -0.29
PRKCSH-220ENST00000593104 GOLGA8HP0CJ92 632 aa13.23□□□□□ -0.29
PRKCSH-220ENST00000593104 NOVP48745 357 aa13.23□□□□□ -0.29
PRKCSH-220ENST00000593104 NBPF20Q3BBV1 942 aa13.23□□□□□ -0.29
PRKCSH-220ENST00000593104 ZNF589Q86UQ0 364 aaPredicted RBP13.23□□□□□ -0.29
PRKCSH-220ENST00000593104 DCAF4Q8WV16 495 aa13.23□□□□□ -0.29
PRKCSH-220ENST00000593104 UHRF1Q96T88 793 aaPredicted RBP13.23□□□□□ -0.29
PRKCSH-220ENST00000593104 ZKSCAN3Q9BRR0 538 aa13.23□□□□□ -0.29
PRKCSH-220ENST00000593104 TRIP12Q14669 1992 aaPredicted RBP13.23□□□□□ -0.29
PRKCSH-220ENST00000593104 SCN10AQ9Y5Y9 1956 aa13.23□□□□□ -0.29
PRKCSH-220ENST00000593104 PDHBP11177 359 aa13.22□□□□□ -0.29
PRKCSH-220ENST00000593104 MRPS5P82675 430 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-220ENST00000593104 SKIV2LQ15477 1246 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-220ENST00000593104 LRRFIP1Q32MZ4 808 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-220ENST00000593104 USH1GQ495M9 461 aa13.22□□□□□ -0.29
PRKCSH-220ENST00000593104 TBC1D5Q92609 795 aa13.22□□□□□ -0.29
PRKCSH-220ENST00000593104 MTIF3Q9H2K0 278 aaKnown RBP13.22□□□□□ -0.29
PRKCSH-220ENST00000593104 ANAPC4Q9UJX5 808 aa13.22□□□□□ -0.29
PRKCSH-220ENST00000593104 Q9Y3F1 56 aa13.22□□□□□ -0.29
PRKCSH-220ENST00000593104 TANC1Q9C0D5 1861 aa13.22□□□□□ -0.29
PRKCSH-220ENST00000593104 PRRC2BQ5JSZ5 2229 aaKnown RBP13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 ORC4O43929 436 aa13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 FGAP02671 866 aa13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 RPS6P62753 249 aaKnown RBP13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 ANKRD45Q5TZF3 282 aa13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 BTNL9Q6UXG8 535 aa13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 RNF207Q6ZRF8 634 aa13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 TBC1D10CQ8IV04 446 aa13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 MTG1Q9BT17 334 aaPredicted RBP13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 UBA5Q9GZZ9 404 aa13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 PCDHA11Q9Y5I1 949 aa13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 TTC28Q96AY4 2481 aa13.21□□□□□ -0.29
PRKCSH-220ENST00000593104 CHD9Q3L8U1 2897 aa13.21□□□□□ -0.3
PRKCSH-220ENST00000593104 CHD7Q9P2D1 2997 aa13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 NEDD4P46934 1319 aa13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 RBM47A0AV96 593 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 FGRP09769 529 aa13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 IQCF3P0C7M6 154 aa13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 TOP1P11387 765 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 PDE4DQ08499 809 aa13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 NMIQ13287 307 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 PPP2R5BQ15173 497 aa13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 TCTN1Q2MV58 587 aa13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 RPUSD2Q8IZ73 545 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 ARNTL2Q8WYA1 636 aa13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 POLR3EQ9NVU0 708 aa13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 ADD3Q9UEY8 706 aaKnown RBP13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 COL4A4P53420 1690 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-220ENST00000593104 MUC3AQ02505 3323 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 REV3LO60673 3130 aa13.19□□□□□ -0.3
PRKCSH-220ENST00000593104 LCHNA4D1U4 455 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms