RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 ITGB8P26012 769 aa15.29■□□□□ 0.04
PRKCSH-218ENST00000593053 FAAP100Q0VG06 881 aa15.29■□□□□ 0.04
PRKCSH-218ENST00000593053 SEC23AQ15436 765 aa15.29■□□□□ 0.04
PRKCSH-218ENST00000593053 FSCN1Q16658 493 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-218ENST00000593053 TOX2Q96NM4 488 aa15.29■□□□□ 0.04
PRKCSH-218ENST00000593053 TAF6LQ9Y6J9 622 aa15.29■□□□□ 0.04
PRKCSH-218ENST00000593053 LOC102724159A0A0B4J2E5 919 aa15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 A0A0U1RQG5 324 aaPredicted RBP15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 ARVCFO00192 962 aa15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 RAG1P15918 1043 aa15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 PDE4DQ08499 809 aa15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 PWP2Q15269 919 aaKnown RBP15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 SHHQ15465 462 aa15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 QRICH1Q2TAL8 776 aa15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 C9orf50Q5SZB4 431 aa15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 GPR153Q6NV75 609 aa15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 CXCL17Q6UXB2 119 aa15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 RALYLQ86SE5 291 aaKnown RBP15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 STAG2Q8N3U4 1231 aa15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 JMJD4Q9H9V9 463 aa15.28■□□□□ 0.04
PRKCSH-218ENST00000593053 ABCB11O95342 1321 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 MROH7Q68CQ1 1323 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 E7EWF7 191 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 IFIT3O14879 490 aaKnown RBP15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 CDK7P50613 346 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 DUSP28Q4G0W2 176 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 Q7L0L9 218 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 FBXO11Q86XK2 927 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 DEFB123Q8N688 67 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 RGS22Q8NE09 1264 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 DNERQ8NFT8 737 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 TBC1D5Q92609 795 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 MAP4K1Q92918 833 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 MPHOSPH6Q99547 160 aaKnown RBP15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 WDR11Q9BZH6 1224 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 Q9Y3F1 56 aa15.27■□□□□ 0.04
PRKCSH-218ENST00000593053 MCM3APO60318 1980 aa15.26■□□□□ 0.03
PRKCSH-218ENST00000593053 KLRF2D3W0D1 207 aa15.26■□□□□ 0.03
PRKCSH-218ENST00000593053 ZEB2O60315 1214 aa15.26■□□□□ 0.03
PRKCSH-218ENST00000593053 CABYRO75952 493 aa15.26■□□□□ 0.03
PRKCSH-218ENST00000593053 EDNRBP24530 442 aa15.26■□□□□ 0.03
PRKCSH-218ENST00000593053 STOX1Q6ZVD7 989 aa15.26■□□□□ 0.03
PRKCSH-218ENST00000593053 CHST3Q7LGC8 479 aa15.26■□□□□ 0.03
PRKCSH-218ENST00000593053 NCOA7Q8NI08 942 aa15.26■□□□□ 0.03
PRKCSH-218ENST00000593053 SENP2Q9HC62 589 aa15.26■□□□□ 0.03
PRKCSH-218ENST00000593053 TBX21Q9UL17 535 aa15.26■□□□□ 0.03
PRKCSH-218ENST00000593053 RBM8AQ9Y5S9 174 aaKnown RBP15.26■□□□□ 0.03
PRKCSH-218ENST00000593053 LTBP2Q14767 1821 aa15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 RBM47A0AV96 593 aaKnown RBP15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 ERICH2A1L162 156 aa15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 B4DLN1 442 aa15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 MRPL12P52815 198 aaKnown RBP15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 EPHB4P54760 987 aa15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 FPGSQ05932 587 aa15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 SKAP1Q86WV1 359 aa15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 MCF2L2Q86YR7 1114 aa15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 FAM126BQ8IXS8 530 aa15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 SYTL5Q8TDW5 730 aaPredicted RBP15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 MAD2L2Q9UI95 211 aa15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 MRPL11Q9Y3B7 192 aaKnown RBP15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 LRRC37A2A6NM11 1700 aa15.25■□□□□ 0.03
PRKCSH-218ENST00000593053 PALM3A6NDB9 673 aaPredicted RBP15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 TLR3O15455 904 aaKnown RBP15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 TIMP1P01033 207 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 PSMC6P62333 389 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 ITGA7Q13683 1181 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 WTAPQ15007 396 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 SART3Q15020 963 aaKnown RBP15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 PPP2R5BQ15173 497 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 TMEM67Q5HYA8 995 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 OR6J1Q8NGC5 347 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 SCFD2Q8WU76 684 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 TAAR1Q96RJ0 339 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 AMNQ9BXJ7 453 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 MAF1Q9H063 256 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 COL20A1Q9P218 1284 aa15.24■□□□□ 0.03
PRKCSH-218ENST00000593053 LCTP09848 1927 aa15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 GRIN2DO15399 1336 aa15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 ZBTB5O15062 677 aa15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 PPP1R11O60927 126 aaPredicted RBP15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 ANTXR2P58335 489 aa15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 GRM4Q14833 912 aa15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 SLC35G1Q2M3R5 365 aa15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 CENPQQ7L2Z9 268 aaPredicted RBP15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 HOMER1Q86YM7 354 aa15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 MB21D2Q8IYB1 491 aaPredicted RBP15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 SLC43A3Q8NBI5 491 aa15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 NSUN6Q8TEA1 469 aaKnown RBP15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 MTMR8Q96EF0 704 aa15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 PPP1R12CQ9BZL4 782 aa15.23■□□□□ 0.03
PRKCSH-218ENST00000593053 NKRFO15226 690 aaKnown RBP eCLIP15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 CFBP00751 764 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 CD4P01730 458 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 MYL3P08590 195 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 TXNP10599 105 aaKnown RBP15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 CPT1AP50416 773 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 TROAPQ12815 778 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 CATIPQ7Z7H3 387 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 IGDCC4Q8TDY8 1250 aa15.22■□□□□ 0.03
PRKCSH-218ENST00000593053 COPS5Q92905 334 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms