RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 BEX3Q00994 111 aa22.13■■□□□ 1.13
CCDC43-205ENST00000592333 ITGA7Q13683 1181 aa22.13■■□□□ 1.13
CCDC43-205ENST00000592333 PPP4R3CPQ6ZMV5 832 aa22.13■■□□□ 1.13
CCDC43-205ENST00000592333 RNF207Q6ZRF8 634 aa22.13■■□□□ 1.13
CCDC43-205ENST00000592333 KIAA1211Q6ZU35 1233 aa22.13■■□□□ 1.13
CCDC43-205ENST00000592333 CLEC4DQ8WXI8 215 aa22.13■■□□□ 1.13
CCDC43-205ENST00000592333 A0A0C4DFX4 3053 aa22.12■■□□□ 1.13
CCDC43-205ENST00000592333 PTPDC1A2A3K4 754 aa22.12■■□□□ 1.13
CCDC43-205ENST00000592333 NKRFO15226 690 aaKnown RBP eCLIP22.12■■□□□ 1.13
CCDC43-205ENST00000592333 PSRC1Q6PGN9 363 aaPredicted RBP22.12■■□□□ 1.13
CCDC43-205ENST00000592333 CWC27Q6UX04 472 aaKnown RBP22.12■■□□□ 1.13
CCDC43-205ENST00000592333 CXCL17Q6UXB2 119 aa22.12■■□□□ 1.13
CCDC43-205ENST00000592333 FBXO16Q8IX29 292 aaPredicted RBP22.12■■□□□ 1.13
CCDC43-205ENST00000592333 CDX2Q99626 313 aaPredicted RBP22.12■■□□□ 1.13
CCDC43-205ENST00000592333 PDGFCQ9NRA1 345 aa22.12■■□□□ 1.13
CCDC43-205ENST00000592333 POLR3EQ9NVU0 708 aa22.12■■□□□ 1.13
CCDC43-205ENST00000592333 IMMTQ16891 758 aaKnown RBP22.11■■□□□ 1.13
CCDC43-205ENST00000592333 RASIP1Q5U651 963 aa22.11■■□□□ 1.13
CCDC43-205ENST00000592333 CNNM2Q9H8M5 875 aa22.11■■□□□ 1.13
CCDC43-205ENST00000592333 LCTP09848 1927 aa22.11■■□□□ 1.13
CCDC43-205ENST00000592333 LAMA4Q16363 1823 aa22.1■■□□□ 1.13
CCDC43-205ENST00000592333 NEDD4P46934 1319 aa22.1■■□□□ 1.13
CCDC43-205ENST00000592333 EDNRBP24530 442 aa22.1■■□□□ 1.13
CCDC43-205ENST00000592333 CPT1AP50416 773 aa22.1■■□□□ 1.13
CCDC43-205ENST00000592333 RPS6P62753 249 aaKnown RBP22.1■■□□□ 1.13
CCDC43-205ENST00000592333 BRDTQ58F21 947 aaPredicted RBP22.1■■□□□ 1.13
CCDC43-205ENST00000592333 EEPD1Q7L9B9 569 aa22.1■■□□□ 1.13
CCDC43-205ENST00000592333 PNMA1Q8ND90 353 aa22.1■■□□□ 1.13
CCDC43-205ENST00000592333 FAM161BQ96MY7 647 aa22.1■■□□□ 1.13
CCDC43-205ENST00000592333 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.1■■□□□ 1.13
CCDC43-205ENST00000592333 WDR11Q9BZH6 1224 aa22.1■■□□□ 1.13
CCDC43-205ENST00000592333 KRT23Q9C075 422 aa22.1■■□□□ 1.13
CCDC43-205ENST00000592333 TTYH1Q9H313 450 aaPredicted RBP22.1■■□□□ 1.13
CCDC43-205ENST00000592333 KPNA6O60684 536 aa22.09■■□□□ 1.13
CCDC43-205ENST00000592333 KDM4AO75164 1064 aa22.09■■□□□ 1.13
CCDC43-205ENST00000592333 ASPRV1Q53RT3 343 aa22.09■■□□□ 1.13
CCDC43-205ENST00000592333 TMEM240Q5SV17 173 aa22.09■■□□□ 1.13
CCDC43-205ENST00000592333 EXOC6Q8TAG9 804 aa22.09■■□□□ 1.13
CCDC43-205ENST00000592333 SCFD2Q8WU76 684 aa22.09■■□□□ 1.13
CCDC43-205ENST00000592333 ZSCAN10Q96SZ4 725 aaPredicted RBP22.09■■□□□ 1.13
CCDC43-205ENST00000592333 MTIF3Q9H2K0 278 aaKnown RBP22.09■■□□□ 1.13
CCDC43-205ENST00000592333 KAT14Q9H8E8 782 aa22.09■■□□□ 1.13
CCDC43-205ENST00000592333 RAD50Q92878 1312 aa22.08■■□□□ 1.13
CCDC43-205ENST00000592333 SUPT20HL2P0C7V6 817 aa22.08■■□□□ 1.13
CCDC43-205ENST00000592333 CSF2RAP15509 400 aa22.08■■□□□ 1.13
CCDC43-205ENST00000592333 CALML3P27482 149 aa22.08■■□□□ 1.13
CCDC43-205ENST00000592333 PDE4DQ08499 809 aa22.08■■□□□ 1.13
CCDC43-205ENST00000592333 C16orf59Q7L2K0 433 aa22.08■■□□□ 1.13
CCDC43-205ENST00000592333 PURBQ96QR8 312 aaKnown RBP22.08■■□□□ 1.13
CCDC43-205ENST00000592333 HIPK3Q9H422 1215 aa22.08■■□□□ 1.13
CCDC43-205ENST00000592333 IL23AQ9NPF7 189 aa22.08■■□□□ 1.13
CCDC43-205ENST00000592333 GRIN2DO15399 1336 aa22.07■■□□□ 1.12
CCDC43-205ENST00000592333 ABCB11O95342 1321 aa22.07■■□□□ 1.12
CCDC43-205ENST00000592333 SLC30A10Q6XR72 485 aa22.07■■□□□ 1.12
CCDC43-205ENST00000592333 MCF2L2Q86YR7 1114 aa22.07■■□□□ 1.12
CCDC43-205ENST00000592333 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.07■■□□□ 1.12
CCDC43-205ENST00000592333 ZSWIM5Q9P217 1185 aa22.07■■□□□ 1.12
CCDC43-205ENST00000592333 DNAJB2P25686 324 aa22.06■■□□□ 1.12
CCDC43-205ENST00000592333 RPUSD2Q8IZ73 545 aaKnown RBP22.06■■□□□ 1.12
CCDC43-205ENST00000592333 HERVK_113Q902F9 699 aa22.06■■□□□ 1.12
CCDC43-205ENST00000592333 YTHDC1Q96MU7 727 aaKnown RBP22.06■■□□□ 1.12
CCDC43-205ENST00000592333 ZKSCAN3Q9BRR0 538 aa22.06■■□□□ 1.12
CCDC43-205ENST00000592333 GPHNQ9NQX3 736 aaPredicted RBP22.06■■□□□ 1.12
CCDC43-205ENST00000592333 A6NJR5 290 aa22.05■■□□□ 1.12
CCDC43-205ENST00000592333 B4E1Z4 1266 aa22.05■■□□□ 1.12
CCDC43-205ENST00000592333 PURAQ00577 322 aaKnown RBP22.05■■□□□ 1.12
CCDC43-205ENST00000592333 PPP2R5BQ15173 497 aa22.05■■□□□ 1.12
CCDC43-205ENST00000592333 ZNF365Q70YC5 407 aa22.05■■□□□ 1.12
CCDC43-205ENST00000592333 ENAHQ8N8S7 591 aaPredicted RBP22.05■■□□□ 1.12
CCDC43-205ENST00000592333 IWS1Q96ST2 819 aa22.05■■□□□ 1.12
CCDC43-205ENST00000592333 PPP1R12CQ9BZL4 782 aa22.05■■□□□ 1.12
CCDC43-205ENST00000592333 ALDH8A1Q9H2A2 487 aaPredicted RBP22.05■■□□□ 1.12
CCDC43-205ENST00000592333 DDX49Q9Y6V7 483 aaKnown RBP22.05■■□□□ 1.12
CCDC43-205ENST00000592333 B4GALT4O60513 344 aa22.04■■□□□ 1.12
CCDC43-205ENST00000592333 PFKMP08237 780 aa22.04■■□□□ 1.12
CCDC43-205ENST00000592333 PARP1P09874 1014 aaKnown RBP22.04■■□□□ 1.12
CCDC43-205ENST00000592333 GOLGA8HP0CJ92 632 aa22.04■■□□□ 1.12
CCDC43-205ENST00000592333 CYP2C18P33260 490 aa22.04■■□□□ 1.12
CCDC43-205ENST00000592333 PTPN11Q06124 597 aaPredicted RBP22.04■■□□□ 1.12
CCDC43-205ENST00000592333 TTLL4Q14679 1199 aa22.04■■□□□ 1.12
CCDC43-205ENST00000592333 CDC37Q16543 378 aaPredicted RBP22.04■■□□□ 1.12
CCDC43-205ENST00000592333 ADGRF4Q8IZF3 695 aa22.04■■□□□ 1.12
CCDC43-205ENST00000592333 SAMD3Q8N6K7 520 aa22.04■■□□□ 1.12
CCDC43-205ENST00000592333 OR6J1Q8NGC5 347 aa22.04■■□□□ 1.12
CCDC43-205ENST00000592333 MAFAQ8NHW3 353 aaPredicted RBP22.04■■□□□ 1.12
CCDC43-205ENST00000592333 NSUN6Q8TEA1 469 aaKnown RBP22.04■■□□□ 1.12
CCDC43-205ENST00000592333 TIFAQ96CG3 184 aa22.04■■□□□ 1.12
CCDC43-205ENST00000592333 UBAC1Q9BSL1 405 aa22.04■■□□□ 1.12
CCDC43-205ENST00000592333 MTG1Q9BT17 334 aaPredicted RBP22.04■■□□□ 1.12
CCDC43-205ENST00000592333 NOC4LQ9BVI4 516 aaKnown RBP22.04■■□□□ 1.12
CCDC43-205ENST00000592333 MAP3K20Q9NYL2 800 aaKnown RBP22.04■■□□□ 1.12
CCDC43-205ENST00000592333 TNKSO95271 1327 aa22.04■■□□□ 1.12
CCDC43-205ENST00000592333 UNC80Q8N2C7 3258 aa22.03■■□□□ 1.12
CCDC43-205ENST00000592333 CUL9Q8IWT3 2517 aa22.03■■□□□ 1.12
CCDC43-205ENST00000592333 FGBP02675 491 aa22.03■■□□□ 1.12
CCDC43-205ENST00000592333 TMEM63BQ5T3F8 832 aa22.03■■□□□ 1.12
CCDC43-205ENST00000592333 NFRKBQ6P4R8 1299 aa22.03■■□□□ 1.12
CCDC43-205ENST00000592333 RUFY2Q8WXA3 655 aa22.03■■□□□ 1.12
CCDC43-205ENST00000592333 UBA5Q9GZZ9 404 aa22.03■■□□□ 1.12
CCDC43-205ENST00000592333 ZNF576Q9H609 170 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms