RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TOGARAM2Q6ZUX3 1019 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 PNMA5Q96PV4 448 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 KANSL2Q9H9L4 492 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 TAB2Q9NYJ8 693 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 ATF5Q9Y2D1 282 aaPredicted RBP17.7■□□□□ 0.42
MBD1-227ENST00000592060 GYPCP04921 128 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 FECHP22830 423 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 TTI2Q6NXR4 508 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 PPFIBP1Q86W92 1011 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 CALML4Q96GE6 196 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 BLOC1S4Q9NUP1 217 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 YDJCA8MPS7 323 aa17.69■□□□□ 0.42
MBD1-227ENST00000592060 N4BP3O15049 544 aa17.69■□□□□ 0.42
MBD1-227ENST00000592060 STIM1Q13586 685 aa17.69■□□□□ 0.42
MBD1-227ENST00000592060 SEPT2Q15019 361 aa17.69■□□□□ 0.42
MBD1-227ENST00000592060 QRICH1Q2TAL8 776 aa17.69■□□□□ 0.42
MBD1-227ENST00000592060 SLFN13Q68D06 897 aa17.69■□□□□ 0.42
MBD1-227ENST00000592060 CC2D2BQ6DHV5 1058 aa17.69■□□□□ 0.42
MBD1-227ENST00000592060 ZSCAN29Q8IWY8 852 aaPredicted RBP17.69■□□□□ 0.42
MBD1-227ENST00000592060 THAP9Q9H5L6 903 aa17.69■□□□□ 0.42
MBD1-227ENST00000592060 STK17AQ9UEE5 414 aa17.69■□□□□ 0.42
MBD1-227ENST00000592060 LRWD1Q9UFC0 647 aa17.69■□□□□ 0.42
MBD1-227ENST00000592060 PSMA7O14818 248 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 FANCGO15287 622 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 ENTPD3O75355 529 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 MRPL12P52815 198 aaKnown RBP17.68■□□□□ 0.42
MBD1-227ENST00000592060 TMEM266Q2M3C6 531 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 COBLL1Q53SF7 1204 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 CCDC93Q567U6 631 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 TMEM179Q6ZVK1 233 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 SUPT20HQ8NEM7 779 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 ANKRD20A12PQ8NF67 263 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 DHTKD1Q96HY7 919 aaPredicted RBP17.68■□□□□ 0.42
MBD1-227ENST00000592060 NAA15Q9BXJ9 866 aaKnown RBP17.68■□□□□ 0.42
MBD1-227ENST00000592060 VPS16Q9H269 839 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 EXOC1Q9NV70 894 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 ZNF215Q9UL58 517 aaPredicted RBP17.68■□□□□ 0.42
MBD1-227ENST00000592060 GOLGA6L9A6NEM1 432 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 ASIC1P78348 528 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 ICA1Q05084 483 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 PDIA5Q14554 519 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 CCDC51Q96ER9 411 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 CAMKK2Q96RR4 588 aa17.68■□□□□ 0.42
MBD1-227ENST00000592060 DUSP9Q99956 384 aaKnown RBP17.68■□□□□ 0.42
MBD1-227ENST00000592060 TDRD3Q9H7E2 651 aaKnown RBP17.68■□□□□ 0.42
MBD1-227ENST00000592060 POTEMA6NI47 508 aa17.67■□□□□ 0.42
MBD1-227ENST00000592060 GCFC2P16383 781 aaKnown RBP17.67■□□□□ 0.42
MBD1-227ENST00000592060 CASP14P31944 242 aa17.67■□□□□ 0.42
MBD1-227ENST00000592060 SLC1A4P43007 532 aa17.67■□□□□ 0.42
MBD1-227ENST00000592060 FXR1P51114 621 aaKnown RBP eCLIP17.67■□□□□ 0.42
MBD1-227ENST00000592060 AMPD3Q01432 767 aa17.67■□□□□ 0.42
MBD1-227ENST00000592060 PDE4DQ08499 809 aa17.67■□□□□ 0.42
MBD1-227ENST00000592060 NAA30Q147X3 362 aaPredicted RBP17.67■□□□□ 0.42
MBD1-227ENST00000592060 MTF1Q14872 753 aa17.67■□□□□ 0.42
MBD1-227ENST00000592060 EZH2Q15910 746 aaKnown RBP17.67■□□□□ 0.42
MBD1-227ENST00000592060 TMEM119Q4V9L6 283 aa17.67■□□□□ 0.42
MBD1-227ENST00000592060 CNGA4Q8IV77 575 aa17.67■□□□□ 0.42
MBD1-227ENST00000592060 CCDC47Q96A33 483 aaKnown RBP17.67■□□□□ 0.42
MBD1-227ENST00000592060 TRIM34Q9BYJ4 488 aa17.67■□□□□ 0.42
MBD1-227ENST00000592060 GTPBP4Q9BZE4 634 aaKnown RBP17.67■□□□□ 0.42
MBD1-227ENST00000592060 PSTPIP2Q9H939 334 aa17.67■□□□□ 0.42
MBD1-227ENST00000592060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.67■□□□□ 0.422e-7■■■■□ 20.8
MBD1-227ENST00000592060 SOWAHDA6NJG2 315 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 SLU7O95391 586 aaKnown RBP17.66■□□□□ 0.42
MBD1-227ENST00000592060 EEF1GP26641 437 aaKnown RBP17.66■□□□□ 0.42
MBD1-227ENST00000592060 CDC37Q16543 378 aaPredicted RBP17.66■□□□□ 0.42
MBD1-227ENST00000592060 RAD9BQ6WBX8 426 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 GMCL1P1Q8NEA9 526 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 NOC3LQ8WTT2 800 aaKnown RBP17.66■□□□□ 0.42
MBD1-227ENST00000592060 HAS1Q92839 578 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 ERO1AQ96HE7 468 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 TRIM47Q96LD4 638 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 RAB34Q9BZG1 259 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 GLT8D2Q9H1C3 349 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 STK32BQ9NY57 414 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 DDX25Q9UHL0 483 aaKnown RBP17.66■□□□□ 0.42
MBD1-227ENST00000592060 DNAI1Q9UI46 699 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 LGALS16A8MUM7 142 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 PPIP5K2O43314 1243 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 GDF11O95390 407 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 CCNE1P24864 410 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 PPP1R2P41236 205 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 JAG1P78504 1218 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 STK4Q13043 487 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 TRIM14Q14142 442 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 ABCB5Q2M3G0 1257 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 CPLX3Q8WVH0 158 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 P2RX5Q93086 422 aa17.66■□□□□ 0.42
MBD1-227ENST00000592060 MYMKA6NI61 221 aa17.65■□□□□ 0.42
MBD1-227ENST00000592060 FCER1AP12319 257 aa17.65■□□□□ 0.42
MBD1-227ENST00000592060 MCM6Q14566 821 aa17.65■□□□□ 0.42
MBD1-227ENST00000592060 CNNM4Q6P4Q7 775 aa17.65■□□□□ 0.42
MBD1-227ENST00000592060 SV2BQ7L1I2 683 aa17.65■□□□□ 0.42
MBD1-227ENST00000592060 KIAA0895Q8NCT3 520 aa17.65■□□□□ 0.42
MBD1-227ENST00000592060 LARP4BQ92615 738 aaKnown RBP17.65■□□□□ 0.42
MBD1-227ENST00000592060 RAD54LQ92698 747 aa17.65■□□□□ 0.42
MBD1-227ENST00000592060 GMCL1Q96IK5 515 aa17.65■□□□□ 0.42
MBD1-227ENST00000592060 PRMT6Q96LA8 375 aaPredicted RBP17.65■□□□□ 0.42
MBD1-227ENST00000592060 NUDT12Q9BQG2 462 aa17.65■□□□□ 0.42
MBD1-227ENST00000592060 DESI2Q9BSY9 194 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms