RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 XPNPEP3Q9NQH7 507 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 PLXNB2O15031 1838 aa11.66□□□□□ -0.54
BRCA1-227ENST00000591849 KLF18A0A0U1RQI7 1052 aa11.66□□□□□ -0.54
BRCA1-227ENST00000591849 GOLGA8AA7E2F4 631 aa11.66□□□□□ -0.54
BRCA1-227ENST00000591849 GOLGA8BA8MQT2 603 aa11.66□□□□□ -0.54
BRCA1-227ENST00000591849 CPA1P15085 419 aa11.66□□□□□ -0.54
BRCA1-227ENST00000591849 SMARCA1P28370 1054 aa11.66□□□□□ -0.54
BRCA1-227ENST00000591849 ALDH5A1P51649 535 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-227ENST00000591849 SLC30A10Q6XR72 485 aa11.66□□□□□ -0.54
BRCA1-227ENST00000591849 Q6ZUG5 572 aa11.66□□□□□ -0.54
BRCA1-227ENST00000591849 DNERQ8NFT8 737 aa11.66□□□□□ -0.54
BRCA1-227ENST00000591849 KCNB2Q92953 911 aa11.66□□□□□ -0.54
BRCA1-227ENST00000591849 PURBQ96QR8 312 aaKnown RBP11.66□□□□□ -0.54
BRCA1-227ENST00000591849 SENP6Q9GZR1 1112 aaPredicted RBP11.66□□□□□ -0.54
BRCA1-227ENST00000591849 RBM28Q9NW13 759 aaKnown RBP11.66□□□□□ -0.54
BRCA1-227ENST00000591849 ALPK3Q96L96 1907 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 LOC102724159A0A0B4J2E5 919 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 GCOM1H8Y6P7 765 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-227ENST00000591849 DNM1LO00429 736 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 PLEKHA8P1O95397 391 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 PGK1P00558 417 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 POLR2MP0CAP2 368 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 RPS6KB1P23443 525 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 TNFAIP2Q03169 654 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 COL9A3Q14050 684 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-227ENST00000591849 PWP2Q15269 919 aaKnown RBP11.65□□□□□ -0.54
BRCA1-227ENST00000591849 RTN1Q16799 776 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 CCDC144BQ3MJ40 725 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 ARHGEF16Q5VV41 709 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 APOA5Q6Q788 366 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 SGMS1Q86VZ5 419 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 CMTR1Q8N1G2 835 aaKnown RBP11.65□□□□□ -0.54
BRCA1-227ENST00000591849 NSUN6Q8TEA1 469 aaKnown RBP11.65□□□□□ -0.54
BRCA1-227ENST00000591849 TBC1D5Q92609 795 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 CUL5Q93034 780 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 VTI1AQ96AJ9 217 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 MTMR8Q96EF0 704 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 FGD4Q96M96 766 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 SPZ1Q9BXG8 430 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 AP5M1Q9H0R1 490 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 VTA1Q9NP79 307 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 CYP46A1Q9Y6A2 500 aa11.65□□□□□ -0.54
BRCA1-227ENST00000591849 COL11A1P12107 1806 aaPredicted RBP11.65□□□□□ -0.55
BRCA1-227ENST00000591849 CCDC196A0A1B0GTZ2 297 aa11.64□□□□□ -0.55
BRCA1-227ENST00000591849 CYTH3O43739 400 aa11.64□□□□□ -0.55
BRCA1-227ENST00000591849 DUSP11O75319 330 aaKnown RBP11.64□□□□□ -0.55
BRCA1-227ENST00000591849 METAP2P50579 478 aaKnown RBP eCLIP11.64□□□□□ -0.55
BRCA1-227ENST00000591849 FXR1P51114 621 aaKnown RBP eCLIP11.64□□□□□ -0.55
BRCA1-227ENST00000591849 ATN1P54259 1190 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-227ENST00000591849 APOBRQ0VD83 1088 aa11.64□□□□□ -0.55
BRCA1-227ENST00000591849 LRRC41Q15345 812 aa11.64□□□□□ -0.55
BRCA1-227ENST00000591849 IQSEC1Q6DN90 963 aa11.64□□□□□ -0.55
BRCA1-227ENST00000591849 UBE2Q1Q7Z7E8 422 aa11.64□□□□□ -0.55
BRCA1-227ENST00000591849 FBXO16Q8IX29 292 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-227ENST00000591849 SRBD1Q8N5C6 995 aaKnown RBP11.64□□□□□ -0.55
BRCA1-227ENST00000591849 SYTL5Q8TDW5 730 aaPredicted RBP11.64□□□□□ -0.55
BRCA1-227ENST00000591849 BRF1Q92994 677 aa11.64□□□□□ -0.55
BRCA1-227ENST00000591849 FERMT2Q96AC1 680 aa11.64□□□□□ -0.55
BRCA1-227ENST00000591849 TAAR1Q96RJ0 339 aa11.64□□□□□ -0.55
BRCA1-227ENST00000591849 RMDN3Q96TC7 470 aa11.64□□□□□ -0.55
BRCA1-227ENST00000591849 MAP3K20Q9NYL2 800 aaKnown RBP11.64□□□□□ -0.55
BRCA1-227ENST00000591849 BRPF3Q9ULD4 1205 aa11.64□□□□□ -0.55
BRCA1-227ENST00000591849 DDX49Q9Y6V7 483 aaKnown RBP11.64□□□□□ -0.55
BRCA1-227ENST00000591849 PARP14Q460N5 1801 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 ZNF236Q9UL36 1845 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 DYNC1LI2O43237 492 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-227ENST00000591849 PPP1R11O60927 126 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-227ENST00000591849 C6orf222P0C671 652 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-227ENST00000591849 HOXA13P31271 388 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-227ENST00000591849 ADCYAP1R1P41586 468 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 AKAP17AQ02040 695 aaKnown RBP11.63□□□□□ -0.55
BRCA1-227ENST00000591849 PPP2R5BQ15173 497 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 STXBP2Q15833 593 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 TMTC3Q6ZXV5 915 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 FCHSD1Q86WN1 690 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 C7orf61Q8IZ16 206 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 SAMD3Q8N6K7 520 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 SMARCC2Q8TAQ2 1214 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 LENG1Q96BZ8 264 aaPredicted RBP11.63□□□□□ -0.55
BRCA1-227ENST00000591849 IWS1Q96ST2 819 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 PDRG1Q9NUG6 133 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 SZT2Q5T011 3432 aa11.63□□□□□ -0.55
BRCA1-227ENST00000591849 hCG_1642624A0A1W2PR95 340 aa11.62□□□□□ -0.55
BRCA1-227ENST00000591849 ZEB2O60315 1214 aa11.62□□□□□ -0.55
BRCA1-227ENST00000591849 MYCLP12524 364 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-227ENST00000591849 EIF2AK2P19525 551 aaKnown RBP11.62□□□□□ -0.55
BRCA1-227ENST00000591849 MNX1P50219 401 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-227ENST00000591849 SLC35G1Q2M3R5 365 aa11.62□□□□□ -0.55
BRCA1-227ENST00000591849 BRDTQ58F21 947 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-227ENST00000591849 GNASQ5JWF2 1037 aa11.62□□□□□ -0.55
BRCA1-227ENST00000591849 SEPT14Q6ZU15 432 aa11.62□□□□□ -0.55
BRCA1-227ENST00000591849 RUFY3Q7L099 469 aa11.62□□□□□ -0.55
BRCA1-227ENST00000591849 HEATR3Q7Z4Q2 680 aa11.62□□□□□ -0.55
BRCA1-227ENST00000591849 PCSK9Q8NBP7 692 aaKnown RBP11.62□□□□□ -0.55
BRCA1-227ENST00000591849 WDR11Q9BZH6 1224 aa11.62□□□□□ -0.55
BRCA1-227ENST00000591849 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
BRCA1-227ENST00000591849 PDGFCQ9NRA1 345 aa11.62□□□□□ -0.55
BRCA1-227ENST00000591849 V9GY48 417 aaPredicted RBP11.62□□□□□ -0.55
BRCA1-227ENST00000591849 ASTN1O14525 1302 aa11.61□□□□□ -0.55
BRCA1-227ENST00000591849 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms