RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ZSWIM6Q9HCJ5 1215 aa13.38□□□□□ -0.27
VMP1-211ENST00000591315 ZHX1Q9UKY1 873 aaPredicted RBP13.38□□□□□ -0.27
VMP1-211ENST00000591315 PCDHA1Q9Y5I3 950 aa13.38□□□□□ -0.27
VMP1-211ENST00000591315 ABCB11O95342 1321 aa13.38□□□□□ -0.27
VMP1-211ENST00000591315 SEPT4O43236 478 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 ZBTB43O43298 467 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 PPFIA3O75145 1194 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 HMGB1P09429 215 aaKnown RBP13.37□□□□□ -0.27
VMP1-211ENST00000591315 KIF5BP33176 963 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 FGD1P98174 961 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 ACVR2BQ13705 512 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 TOB2Q14106 344 aaPredicted RBP13.37□□□□□ -0.27
VMP1-211ENST00000591315 SYTL5Q8TDW5 730 aaPredicted RBP13.37□□□□□ -0.27
VMP1-211ENST00000591315 TAAR1Q96RJ0 339 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 SPZ1Q9BXG8 430 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 AMNQ9BXJ7 453 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 PDGFCQ9NRA1 345 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 SYNGAP1Q96PV0 1343 aa13.37□□□□□ -0.27
VMP1-211ENST00000591315 PNMA6FA0A0J9YX94 578 aa13.36□□□□□ -0.27
VMP1-211ENST00000591315 GOLGA8AA7E2F4 631 aa13.36□□□□□ -0.27
VMP1-211ENST00000591315 GOLGA8BA8MQT2 603 aa13.36□□□□□ -0.27
VMP1-211ENST00000591315 EPB41L2O43491 1005 aaKnown RBP13.36□□□□□ -0.27
VMP1-211ENST00000591315 DTNBO60941 627 aa13.36□□□□□ -0.27
VMP1-211ENST00000591315 MYCNP04198 464 aaPredicted RBP13.36□□□□□ -0.27
VMP1-211ENST00000591315 HOXA13P31271 388 aaPredicted RBP13.36□□□□□ -0.27
VMP1-211ENST00000591315 ADD1P35611 737 aaKnown RBP13.36□□□□□ -0.27
VMP1-211ENST00000591315 ALDH5A1P51649 535 aaPredicted RBP13.36□□□□□ -0.27
VMP1-211ENST00000591315 FUT2Q10981 343 aa13.36□□□□□ -0.27
VMP1-211ENST00000591315 RTN1Q16799 776 aa13.36□□□□□ -0.27
VMP1-211ENST00000591315 GJC2Q5T442 439 aaPredicted RBP13.36□□□□□ -0.27
VMP1-211ENST00000591315 RUFY3Q7L099 469 aa13.36□□□□□ -0.27
VMP1-211ENST00000591315 FBXO16Q8IX29 292 aaPredicted RBP13.36□□□□□ -0.27
VMP1-211ENST00000591315 CNPY2Q9Y2B0 182 aa13.36□□□□□ -0.27
VMP1-211ENST00000591315 MRPL11Q9Y3B7 192 aaKnown RBP13.36□□□□□ -0.27
VMP1-211ENST00000591315 ALPK3Q96L96 1907 aa13.36□□□□□ -0.27
VMP1-211ENST00000591315 LRRC37A2A6NM11 1700 aa13.36□□□□□ -0.27
VMP1-211ENST00000591315 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.35□□□□□ -0.27
VMP1-211ENST00000591315 PGK1P00558 417 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 CFBP00751 764 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 CALM1P0DP23 149 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 CALM2P0DP24 149 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 CALM3P0DP25 149 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 PSMA5P28066 241 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 GNAQP50148 359 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 CCDC144BQ3MJ40 725 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 SYNE3Q6ZMZ3 975 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 MSL3Q8N5Y2 521 aaKnown RBP13.35□□□□□ -0.27
VMP1-211ENST00000591315 RRP36Q96EU6 259 aaKnown RBP13.35□□□□□ -0.27
VMP1-211ENST00000591315 AGXT2Q9BYV1 514 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 NCOA5Q9HCD5 579 aaKnown RBP13.35□□□□□ -0.27
VMP1-211ENST00000591315 PNMA2Q9UL42 364 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 GTF3C3Q9Y5Q9 886 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 CYP46A1Q9Y6A2 500 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 CNTNAP5Q8WYK1 1306 aa13.35□□□□□ -0.27
VMP1-211ENST00000591315 MYADML2A6NDP7 307 aa13.34□□□□□ -0.27
VMP1-211ENST00000591315 ASB14A6NK59 587 aa13.34□□□□□ -0.27
VMP1-211ENST00000591315 ADCYAP1R1P41586 468 aa13.34□□□□□ -0.27
VMP1-211ENST00000591315 TAPT1Q6NXT6 567 aa13.34□□□□□ -0.27
VMP1-211ENST00000591315 RGS22Q8NE09 1264 aa13.34□□□□□ -0.27
VMP1-211ENST00000591315 MORC4Q8TE76 937 aa13.34□□□□□ -0.27
VMP1-211ENST00000591315 GPKOWQ92917 476 aaPredicted RBP eCLIP13.34□□□□□ -0.27
VMP1-211ENST00000591315 ZFP91Q96JP5 570 aaPredicted RBP13.34□□□□□ -0.27
VMP1-211ENST00000591315 LZTS2Q9BRK4 669 aa13.34□□□□□ -0.27
VMP1-211ENST00000591315 TM6SF1Q9BZW5 370 aa13.34□□□□□ -0.27
VMP1-211ENST00000591315 ABHD16BQ9H3Z7 469 aa13.34□□□□□ -0.27
VMP1-211ENST00000591315 NRBP1Q9UHY1 535 aa13.34□□□□□ -0.27
VMP1-211ENST00000591315 AKR1A1P14550 325 aa13.33□□□□□ -0.28
VMP1-211ENST00000591315 SMARCA1P28370 1054 aa13.33□□□□□ -0.28
VMP1-211ENST00000591315 PDIA3P30101 505 aaKnown RBP13.33□□□□□ -0.28
VMP1-211ENST00000591315 HSD17B4P51659 736 aa13.33□□□□□ -0.28
VMP1-211ENST00000591315 CCT2P78371 535 aaKnown RBP13.33□□□□□ -0.28
VMP1-211ENST00000591315 LRRC41Q15345 812 aa13.33□□□□□ -0.28
VMP1-211ENST00000591315 TYW1BQ6NUM6 668 aa13.33□□□□□ -0.28
VMP1-211ENST00000591315 FCHSD1Q86WN1 690 aa13.33□□□□□ -0.28
VMP1-211ENST00000591315 FBXL16Q8N461 479 aa13.33□□□□□ -0.28
VMP1-211ENST00000591315 IL31RAQ8NI17 732 aa13.33□□□□□ -0.28
VMP1-211ENST00000591315 PDRG1Q9NUG6 133 aa13.33□□□□□ -0.28
VMP1-211ENST00000591315 FAM184BQ9ULE4 1060 aa13.33□□□□□ -0.28
VMP1-211ENST00000591315 V9GY48 417 aaPredicted RBP13.33□□□□□ -0.28
VMP1-211ENST00000591315 ADAMTS3O15072 1205 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 RARBP10826 455 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 COL6A1P12109 1028 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 SMPD1P17405 629 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 EIF2AK2P19525 551 aaKnown RBP13.32□□□□□ -0.28
VMP1-211ENST00000591315 EDNRBP24530 442 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 METAP2P50579 478 aaKnown RBP eCLIP13.32□□□□□ -0.28
VMP1-211ENST00000591315 USP17L6PQ6QN14 398 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 NECAB2Q7Z6G3 386 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 MCF2L2Q86YR7 1114 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 ANKLE1Q8NAG6 615 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 FERMT2Q96AC1 680 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 RMDN3Q96TC7 470 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 XPNPEP3Q9NQH7 507 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
VMP1-211ENST00000591315 ADD3Q9UEY8 706 aaKnown RBP13.32□□□□□ -0.28
VMP1-211ENST00000591315 SYNRGQ9UMZ2 1314 aa13.32□□□□□ -0.28
VMP1-211ENST00000591315 GCOM1H8Y6P7 765 aaPredicted RBP13.31□□□□□ -0.28
VMP1-211ENST00000591315 CTAGE5O15320 804 aa13.31□□□□□ -0.28
VMP1-211ENST00000591315 MSCO60682 206 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms