RNA–Protein interactions for RNA: ENST00000590526.5

RTN2-208, Transcript of reticulon 2, human

TSL 5 BASIC

Gene RTN2, Length 2,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTN2-208	ENST00000590526	CCSER1	Q9C0I3	900 aa		27.73	■■■□□ 2.03
RTN2-208	ENST00000590526	PRCP	P42785	496 aa		27.73	■■■□□ 2.03
RTN2-208	ENST00000590526	TPD52L1	Q16890	204 aa	Predicted RBP	27.73	■■■□□ 2.03
RTN2-208	ENST00000590526	IMPACT	Q9P2X3	320 aa		27.73	■■■□□ 2.03
RTN2-208	ENST00000590526	ERCC5	P28715	1186 aa	Predicted RBP	27.72	■■■□□ 2.03
RTN2-208	ENST00000590526	KMT5B	Q4FZB7	885 aa		27.72	■■■□□ 2.03
RTN2-208	ENST00000590526	OGFOD1	Q8N543	542 aa		27.72	■■■□□ 2.03
RTN2-208	ENST00000590526	KLRC4	O43908	158 aa		27.72	■■■□□ 2.03
RTN2-208	ENST00000590526	SFPQ	P23246	707 aa	Known RBP eCLIP	27.72	■■■□□ 2.03
RTN2-208	ENST00000590526	APTX	Q7Z2E3	356 aa	Known RBP	27.72	■■■□□ 2.03
RTN2-208	ENST00000590526	TMOD2	Q9NZR1	351 aa		27.72	■■■□□ 2.03
RTN2-208	ENST00000590526	ZHX1	Q9UKY1	873 aa	Predicted RBP	27.72	■■■□□ 2.03
RTN2-208	ENST00000590526	LAD1	O00515	517 aa		27.71	■■■□□ 2.03
RTN2-208	ENST00000590526	NPM3	O75607	178 aa	Known RBP	27.71	■■■□□ 2.03
RTN2-208	ENST00000590526	PMS1	P54277	932 aa	Known RBP	27.71	■■■□□ 2.03
RTN2-208	ENST00000590526	SPATA1	Q5VX52	437 aa		27.71	■■■□□ 2.03
RTN2-208	ENST00000590526	NIM1K	Q8IY84	436 aa		27.71	■■■□□ 2.03
RTN2-208	ENST00000590526	DCAF4	Q8WV16	495 aa		27.71	■■■□□ 2.03
RTN2-208	ENST00000590526	hCG_1984214	I3L0E3	225 aa		27.71	■■■□□ 2.03
RTN2-208	ENST00000590526	GSDMD	P57764	484 aa		27.71	■■■□□ 2.03
RTN2-208	ENST00000590526	ZNF713	Q8N859	430 aa	Predicted RBP	27.71	■■■□□ 2.03
RTN2-208	ENST00000590526	GLIS2	Q9BZE0	524 aa	Predicted RBP	27.71	■■■□□ 2.03
RTN2-208	ENST00000590526	KIF13B	Q9NQT8	1826 aa		27.71	■■■□□ 2.03
RTN2-208	ENST00000590526	CBFA2T2	O43439	604 aa		27.7	■■■□□ 2.03
RTN2-208	ENST00000590526	NELFB	Q8WX92	580 aa		27.7	■■■□□ 2.03
RTN2-208	ENST00000590526	KBTBD4	Q9NVX7	518 aa		27.7	■■■□□ 2.03
RTN2-208	ENST00000590526	ADK	P55263	362 aa	Known RBP	27.7	■■■□□ 2.02
RTN2-208	ENST00000590526	IGSF22	Q8N9C0	903 aa		27.7	■■■□□ 2.02
RTN2-208	ENST00000590526	ZNRF3	Q9ULT6	936 aa		27.7	■■■□□ 2.02
RTN2-208	ENST00000590526	CCT6A	P40227	531 aa	Known RBP	27.69	■■■□□ 2.02
RTN2-208	ENST00000590526	GRB10	Q13322	594 aa		27.69	■■■□□ 2.02
RTN2-208	ENST00000590526	ZNF658	Q5TYW1	1059 aa	Predicted RBP	27.69	■■■□□ 2.02
RTN2-208	ENST00000590526	FAM177A1	Q8N128	213 aa	Predicted RBP	27.69	■■■□□ 2.02
RTN2-208	ENST00000590526	HAS1	Q92839	578 aa		27.69	■■■□□ 2.02
RTN2-208	ENST00000590526	ECM1	Q16610	540 aa		27.68	■■■□□ 2.02
RTN2-208	ENST00000590526	SPDYE2	Q495Y8	402 aa		27.68	■■■□□ 2.02
RTN2-208	ENST00000590526	KCNK18	Q7Z418	384 aa		27.68	■■■□□ 2.02
RTN2-208	ENST00000590526	PNMA5	Q96PV4	448 aa		27.68	■■■□□ 2.02
RTN2-208	ENST00000590526	LRWD1	Q9UFC0	647 aa		27.68	■■■□□ 2.02
RTN2-208	ENST00000590526	DDX25	Q9UHL0	483 aa	Known RBP	27.68	■■■□□ 2.02
RTN2-208	ENST00000590526	MRPL12	P52815	198 aa	Known RBP	27.68	■■■□□ 2.02
RTN2-208	ENST00000590526	E4F1	Q66K89	784 aa	Predicted RBP	27.68	■■■□□ 2.02
RTN2-208	ENST00000590526	PIM2	Q9P1W9	311 aa		27.68	■■■□□ 2.02
RTN2-208	ENST00000590526	HDAC9	Q9UKV0	1011 aa		27.68	■■■□□ 2.02
RTN2-208	ENST00000590526	BMP3	P12645	472 aa		27.67	■■■□□ 2.02
RTN2-208	ENST00000590526	HOXA13	P31271	388 aa	Predicted RBP	27.67	■■■□□ 2.02
RTN2-208	ENST00000590526	ZNF592	Q92610	1267 aa		27.67	■■■□□ 2.02
RTN2-208	ENST00000590526	FCER1A	P12319	257 aa		27.67	■■■□□ 2.02
RTN2-208	ENST00000590526	TNNT1	P13805	278 aa		27.67	■■■□□ 2.02
RTN2-208	ENST00000590526	MCM6	Q14566	821 aa		27.67	■■■□□ 2.02
RTN2-208	ENST00000590526	CDKAL1	Q5VV42	579 aa		27.67	■■■□□ 2.02
RTN2-208	ENST00000590526	FAM151A	Q8WW52	585 aa		27.67	■■■□□ 2.02
RTN2-208	ENST00000590526	ASTN2	O75129	1339 aa	Predicted RBP	27.67	■■■□□ 2.02
RTN2-208	ENST00000590526	MEIS2	O14770	477 aa		27.66	■■■□□ 2.02
RTN2-208	ENST00000590526	SYDE2	Q5VT97	1194 aa		27.66	■■■□□ 2.02
RTN2-208	ENST00000590526	CCDC150	Q8NCX0	1101 aa		27.66	■■■□□ 2.02
RTN2-208	ENST00000590526	NR1I3	Q14994	352 aa		27.66	■■■□□ 2.02
RTN2-208	ENST00000590526	FAM83B	Q5T0W9	1011 aa		27.66	■■■□□ 2.02
RTN2-208	ENST00000590526	PPP1R18	Q6NYC8	613 aa		27.66	■■■□□ 2.02
RTN2-208	ENST00000590526	PYM1	Q9BRP8	204 aa	Known RBP	27.66	■■■□□ 2.02
RTN2-208	ENST00000590526	BLOC1S4	Q9NUP1	217 aa		27.66	■■■□□ 2.02
RTN2-208	ENST00000590526	WNT10B	O00744	389 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	PAK1	Q13153	545 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	CEP135	Q66GS9	1140 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	CCAR2	Q8N163	923 aa	Known RBP	27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	GMCL1P1	Q8NEA9	526 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	FER1L6	Q2WGJ9	1857 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	ASIC1	P78348	528 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	DGKZ	Q13574	1117 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	DYM	Q7RTS9	669 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	CPLX3	Q8WVH0	158 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	TBC1D5	Q92609	795 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	AK8	Q96MA6	479 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	ANO3	Q9BYT9	981 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	TRIM9	Q9C026	710 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	ZBTB21	Q9ULJ3	1066 aa		27.65	■■■□□ 2.02
RTN2-208	ENST00000590526	SLC30A10	Q6XR72	485 aa		27.64	■■■□□ 2.02
RTN2-208	ENST00000590526	VPS16	Q9H269	839 aa		27.64	■■■□□ 2.02
RTN2-208	ENST00000590526	PRR12	Q9ULL5	1215 aa		27.64	■■■□□ 2.02
RTN2-208	ENST00000590526	BRCA1	P38398	1863 aa	Known RBP	27.64	■■■□□ 2.01
RTN2-208	ENST00000590526		A0A1B0GTH6	734 aa		27.64	■■■□□ 2.01
RTN2-208	ENST00000590526	NFKBIE	O00221	500 aa		27.64	■■■□□ 2.01
RTN2-208	ENST00000590526	OPLAH	O14841	1288 aa		27.64	■■■□□ 2.01
RTN2-208	ENST00000590526	STK4	Q13043	487 aa		27.64	■■■□□ 2.01
RTN2-208	ENST00000590526	SNX29	Q8TEQ0	813 aa		27.64	■■■□□ 2.01
RTN2-208	ENST00000590526	ZFP91	Q96JP5	570 aa	Predicted RBP	27.64	■■■□□ 2.01
RTN2-208	ENST00000590526	CCDC94	Q9BW85	323 aa	Predicted RBP	27.64	■■■□□ 2.01
RTN2-208	ENST00000590526	TAB2	Q9NYJ8	693 aa		27.64	■■■□□ 2.01
RTN2-208	ENST00000590526	STAT3	P40763	770 aa		27.63	■■■□□ 2.01
RTN2-208	ENST00000590526	SLC16A10	Q8TF71	515 aa		27.63	■■■□□ 2.01
RTN2-208	ENST00000590526	GMCL1	Q96IK5	515 aa		27.63	■■■□□ 2.01
RTN2-208	ENST00000590526	PRDM10	Q9NQV6	1147 aa		27.63	■■■□□ 2.01
RTN2-208	ENST00000590526	RIOK3	O14730	519 aa	Known RBP	27.63	■■■□□ 2.01
RTN2-208	ENST00000590526	MARCH6	O60337	910 aa		27.63	■■■□□ 2.01
RTN2-208	ENST00000590526	TBX2	Q13207	712 aa	Predicted RBP	27.63	■■■□□ 2.01
RTN2-208	ENST00000590526	KRT31	Q15323	416 aa		27.63	■■■□□ 2.01
RTN2-208	ENST00000590526	DALRD3	Q5D0E6	543 aa	Known RBP	27.63	■■■□□ 2.01
RTN2-208	ENST00000590526	CCDC174	Q6PII3	467 aa		27.63	■■■□□ 2.01
RTN2-208	ENST00000590526	FBXO11	Q86XK2	927 aa		27.63	■■■□□ 2.01
RTN2-208	ENST00000590526	HERC5	Q9UII4	1024 aa	Known RBP	27.63	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms