RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 RPS6P62753 249 aaKnown RBP21.14■□□□□ 0.97
H3F3B-209ENST00000589949 ZNF697Q5TEC3 545 aa21.14■□□□□ 0.97
H3F3B-209ENST00000589949 MFSD5Q6N075 450 aa21.14■□□□□ 0.97
H3F3B-209ENST00000589949 KIAA1211Q6ZU35 1233 aa21.14■□□□□ 0.97
H3F3B-209ENST00000589949 ENAHQ8N8S7 591 aaPredicted RBP21.14■□□□□ 0.97
H3F3B-209ENST00000589949 PNMA1Q8ND90 353 aa21.14■□□□□ 0.97
H3F3B-209ENST00000589949 TBC1D5Q92609 795 aa21.14■□□□□ 0.97
H3F3B-209ENST00000589949 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.14■□□□□ 0.976e-23■□□□□ 9.8
H3F3B-209ENST00000589949 MROH7Q68CQ1 1323 aa21.13■□□□□ 0.97
H3F3B-209ENST00000589949 WDR19Q8NEZ3 1342 aa21.13■□□□□ 0.97
H3F3B-209ENST00000589949 DUSP28Q4G0W2 176 aa21.13■□□□□ 0.97
H3F3B-209ENST00000589949 RNF207Q6ZRF8 634 aa21.13■□□□□ 0.97
H3F3B-209ENST00000589949 ZSCAN10Q96SZ4 725 aaPredicted RBP21.13■□□□□ 0.97
H3F3B-209ENST00000589949 CDX2Q99626 313 aaPredicted RBP21.13■□□□□ 0.97
H3F3B-209ENST00000589949 PPP1R12CQ9BZL4 782 aa21.13■□□□□ 0.97
H3F3B-209ENST00000589949 AP5M1Q9H0R1 490 aa21.13■□□□□ 0.97
H3F3B-209ENST00000589949 Q9Y3F1 56 aa21.13■□□□□ 0.97
H3F3B-209ENST00000589949 UNC80Q8N2C7 3258 aa21.13■□□□□ 0.97
H3F3B-209ENST00000589949 UMODL1Q5DID0 1318 aa21.12■□□□□ 0.97
H3F3B-209ENST00000589949 RBM47A0AV96 593 aaKnown RBP21.12■□□□□ 0.97
H3F3B-209ENST00000589949 HIP1O00291 1037 aa21.12■□□□□ 0.97
H3F3B-209ENST00000589949 CSF2RAP15509 400 aa21.12■□□□□ 0.97
H3F3B-209ENST00000589949 EDNRBP24530 442 aa21.12■□□□□ 0.97
H3F3B-209ENST00000589949 CYP2C18P33260 490 aa21.12■□□□□ 0.97
H3F3B-209ENST00000589949 IRX6P78412 446 aaPredicted RBP21.12■□□□□ 0.97
H3F3B-209ENST00000589949 ITGA7Q13683 1181 aa21.12■□□□□ 0.97
H3F3B-209ENST00000589949 USH1GQ495M9 461 aa21.12■□□□□ 0.97
H3F3B-209ENST00000589949 GPATCH4Q5T3I0 446 aaKnown RBP21.12■□□□□ 0.97
H3F3B-209ENST00000589949 WDR11Q9BZH6 1224 aa21.12■□□□□ 0.97
H3F3B-209ENST00000589949 TRPV6Q9H1D0 765 aa21.12■□□□□ 0.97
H3F3B-209ENST00000589949 ADD3Q9UEY8 706 aaKnown RBP21.12■□□□□ 0.97
H3F3B-209ENST00000589949 TMEM240Q5SV17 173 aa21.11■□□□□ 0.97
H3F3B-209ENST00000589949 TTC22Q5TAA0 569 aa21.11■□□□□ 0.97
H3F3B-209ENST00000589949 ADGRF4Q8IZF3 695 aa21.11■□□□□ 0.97
H3F3B-209ENST00000589949 PRUNE2Q8WUY3 3088 aa21.1■□□□□ 0.97
H3F3B-209ENST00000589949 CDH23Q9H251 3354 aa21.1■□□□□ 0.97
H3F3B-209ENST00000589949 TNKSO95271 1327 aa21.1■□□□□ 0.97
H3F3B-209ENST00000589949 ACRP10323 421 aa21.1■□□□□ 0.97
H3F3B-209ENST00000589949 CDC37Q16543 378 aaPredicted RBP21.1■□□□□ 0.97
H3F3B-209ENST00000589949 IMMTQ16891 758 aaKnown RBP21.1■□□□□ 0.97
H3F3B-209ENST00000589949 IQCA1Q86XH1 822 aa21.1■□□□□ 0.97
H3F3B-209ENST00000589949 KAT14Q9H8E8 782 aa21.1■□□□□ 0.97
H3F3B-209ENST00000589949 COL20A1Q9P218 1284 aa21.1■□□□□ 0.97
H3F3B-209ENST00000589949 LOC102724159A0A0B4J2E5 919 aa21.09■□□□□ 0.97
H3F3B-209ENST00000589949 B4GALT4O60513 344 aa21.09■□□□□ 0.97
H3F3B-209ENST00000589949 CABYRO75952 493 aa21.09■□□□□ 0.97
H3F3B-209ENST00000589949 PWP2Q15269 919 aaKnown RBP21.09■□□□□ 0.97
H3F3B-209ENST00000589949 RASIP1Q5U651 963 aa21.09■□□□□ 0.97
H3F3B-209ENST00000589949 CYB5R4Q7L1T6 521 aa21.09■□□□□ 0.97
H3F3B-209ENST00000589949 PPP1R13LQ8WUF5 828 aa21.09■□□□□ 0.97
H3F3B-209ENST00000589949 COPS5Q92905 334 aa21.09■□□□□ 0.97
H3F3B-209ENST00000589949 TAF6LQ9Y6J9 622 aa21.09■□□□□ 0.97
H3F3B-209ENST00000589949 GRXCR1A8MXD5 290 aa21.08■□□□□ 0.97
H3F3B-209ENST00000589949 DLL1O00548 723 aa21.08■□□□□ 0.97
H3F3B-209ENST00000589949 TLR3O15455 904 aaKnown RBP21.08■□□□□ 0.97
H3F3B-209ENST00000589949 ARIH2O95376 493 aa21.08■□□□□ 0.97
H3F3B-209ENST00000589949 PTH1RQ03431 593 aa21.08■□□□□ 0.97
H3F3B-209ENST00000589949 SEC23AQ15436 765 aa21.08■□□□□ 0.97
H3F3B-209ENST00000589949 STAG2Q8N3U4 1231 aa21.08■□□□□ 0.97
H3F3B-209ENST00000589949 MYLIPQ8WY64 445 aa21.08■□□□□ 0.97
H3F3B-209ENST00000589949 VWCEQ96DN2 955 aa21.08■□□□□ 0.97
H3F3B-209ENST00000589949 JMJD4Q9H9V9 463 aa21.08■□□□□ 0.97
H3F3B-209ENST00000589949 CTNNA3Q9UI47 895 aa21.08■□□□□ 0.97
H3F3B-209ENST00000589949 PNMA2Q9UL42 364 aa21.08■□□□□ 0.97
H3F3B-209ENST00000589949 CHD9Q3L8U1 2897 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 PURAQ00577 322 aaKnown RBP21.07■□□□□ 0.96
H3F3B-209ENST00000589949 PDE4DQ08499 809 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 PPIGQ13427 754 aaKnown RBP eCLIP21.07■□□□□ 0.962e-17■□□□□ 8.1
H3F3B-209ENST00000589949 SLC35G1Q2M3R5 365 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 QRICH1Q2TAL8 776 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 CCDC178Q5BJE1 867 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 ZNF365Q70YC5 407 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 RGS22Q8NE09 1264 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 DNERQ8NFT8 737 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 TAAR1Q96RJ0 339 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 NOC4LQ9BVI4 516 aaKnown RBP21.07■□□□□ 0.96
H3F3B-209ENST00000589949 KRT23Q9C075 422 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 WNT8AQ9H1J5 351 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 HIPK3Q9H422 1215 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 VAT1LQ9HCJ6 419 aa21.07■□□□□ 0.96
H3F3B-209ENST00000589949 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.06■□□□□ 0.96
H3F3B-209ENST00000589949 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.06■□□□□ 0.96
H3F3B-209ENST00000589949 ZEB2O60315 1214 aa21.06■□□□□ 0.96
H3F3B-209ENST00000589949 CHMLP26374 656 aa21.06■□□□□ 0.96
H3F3B-209ENST00000589949 NT5C2P49902 561 aa21.06■□□□□ 0.96
H3F3B-209ENST00000589949 ASPRV1Q53RT3 343 aa21.06■□□□□ 0.96
H3F3B-209ENST00000589949 TMEM199Q8N511 208 aa21.06■□□□□ 0.96
H3F3B-209ENST00000589949 SYTL5Q8TDW5 730 aaPredicted RBP21.06■□□□□ 0.96
H3F3B-209ENST00000589949 ALDH8A1Q9H2A2 487 aaPredicted RBP21.06■□□□□ 0.96
H3F3B-209ENST00000589949 SENP2Q9HC62 589 aa21.06■□□□□ 0.96
H3F3B-209ENST00000589949 OPLAHO14841 1288 aa21.05■□□□□ 0.96
H3F3B-209ENST00000589949 PPP1R11O60927 126 aaPredicted RBP21.05■□□□□ 0.96
H3F3B-209ENST00000589949 DNAJB2P25686 324 aa21.05■□□□□ 0.96
H3F3B-209ENST00000589949 PBX2P40425 430 aa21.05■□□□□ 0.96
H3F3B-209ENST00000589949 CCL23P55773 120 aa21.05■□□□□ 0.96
H3F3B-209ENST00000589949 OR6J1Q8NGC5 347 aa21.05■□□□□ 0.96
H3F3B-209ENST00000589949 CNNM2Q9H8M5 875 aa21.05■□□□□ 0.96
H3F3B-209ENST00000589949 IL23AQ9NPF7 189 aa21.05■□□□□ 0.96
H3F3B-209ENST00000589949 TRMT13Q9NUP7 481 aaKnown RBP21.05■□□□□ 0.96
H3F3B-209ENST00000589949 CXXC1Q9P0U4 656 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms