RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 FAM217BQ9NTX9 383 aaPredicted RBP16.18■□□□□ 0.18
RETREG3-208ENST00000589797 DCCP43146 1447 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 ZMYND10O75800 440 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 TRAF1Q13077 416 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 TICAM2Q86XR7 235 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 SPTLC3Q9NUV7 552 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 FCER1AP12319 257 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 STAT3P40763 770 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 NKX2-3Q8TAU0 364 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 CHURC1Q8WUH1 139 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 GTPBP4Q9BZE4 634 aaKnown RBP16.18■□□□□ 0.18
RETREG3-208ENST00000589797 ANKRD26Q9UPS8 1709 aa16.18■□□□□ 0.18
RETREG3-208ENST00000589797 E9PMD0 336 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 F5H6K3 240 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 KLRC3Q07444 240 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 ZNF658Q5TYW1 1059 aaPredicted RBP16.17■□□□□ 0.18
RETREG3-208ENST00000589797 ADGRF4Q8IZF3 695 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 CEP112Q8N8E3 955 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 EHBP1Q8NDI1 1231 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 NEDD1Q8NHV4 660 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 PHF20Q9BVI0 1012 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 IFIH1Q9BYX4 1025 aaKnown RBP16.17■□□□□ 0.18
RETREG3-208ENST00000589797 RPL13P26373 211 aaKnown RBP16.17■□□□□ 0.18
RETREG3-208ENST00000589797 KLHL30Q0D2K2 578 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 GALNT17Q6IS24 598 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 TOGARAM2Q6ZUX3 1019 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 SLC35F6Q8N357 371 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 BARHL2Q9NY43 387 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 CCPG1Q9ULG6 757 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 TNS2Q63HR2 1409 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 EPB41P11171 864 aaKnown RBP16.17■□□□□ 0.18
RETREG3-208ENST00000589797 DNM2P50570 870 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 PPP4R3AQ6IN85 833 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 LSM14BQ9BX40 385 aaKnown RBP16.17■□□□□ 0.18
RETREG3-208ENST00000589797 AGXT2Q9BYV1 514 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 TSPYL1Q9H0U9 437 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 STX10O60499 249 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 MAATS1Q7Z4T9 603 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 TBC1D5Q92609 795 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 P2RX5Q93086 422 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 KCNQ5Q9NR82 932 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.17■□□□□ 0.18
RETREG3-208ENST00000589797 FRMD4BQ9Y2L6 1034 aa16.17■□□□□ 0.18
RETREG3-208ENST00000589797 NFAT5O94916 1531 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 ABCB4P21439 1286 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 PTPAQ15257 358 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 SUPT20HQ8NEM7 779 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 CCDC127Q96BQ5 260 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 FUCA2Q9BTY2 467 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 SH2D4AQ9H788 454 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 GCOM1H8Y6P7 765 aaPredicted RBP16.16■□□□□ 0.18
RETREG3-208ENST00000589797 POLR2MP0CAP2 368 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 CXCR5P32302 372 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 CTTNQ14247 550 aaKnown RBP16.16■□□□□ 0.18
RETREG3-208ENST00000589797 GRM4Q14833 912 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 MAP9Q49MG5 647 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 PRAMEF18Q5VWM3 479 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 PAGR1Q9BTK6 254 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 TRIM31Q9BZY9 425 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 BHMT2Q9H2M3 363 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 PNMA6FA0A0J9YX94 578 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 ADRA2BP18089 450 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 QRICH1Q2TAL8 776 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 UTP14CQ5TAP6 766 aaKnown RBP16.16■□□□□ 0.18
RETREG3-208ENST00000589797 SARM1Q6SZW1 724 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 TTLL6Q8N841 843 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 NT5C3AQ9H0P0 336 aa16.16■□□□□ 0.18
RETREG3-208ENST00000589797 ERLIN2O94905 339 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 PCDHA6Q9UN73 950 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 PCDHA8Q9Y5H6 950 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 PODNQ7Z5L7 613 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 CERKQ8TCT0 537 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 DDX12PQ92771 950 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 H0YHG0 523 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 SEC31AO94979 1220 aaKnown RBP16.15■□□□□ 0.18
RETREG3-208ENST00000589797 TAL1P17542 331 aaPredicted RBP16.15■□□□□ 0.18
RETREG3-208ENST00000589797 FAM83BQ5T0W9 1011 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 LRCH2Q5VUJ6 765 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 CDC42EP5Q6NZY7 148 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 ARHGAP27Q6ZUM4 889 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 PAXIP1Q6ZW49 1069 aaPredicted RBP16.15■□□□□ 0.18
RETREG3-208ENST00000589797 FOXP4Q8IVH2 680 aaPredicted RBP16.15■□□□□ 0.18
RETREG3-208ENST00000589797 LRRC4BQ9NT99 713 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 MTMR4Q9NYA4 1195 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 VPS18Q9P253 973 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 SWAP70Q9UH65 585 aa16.15■□□□□ 0.18
RETREG3-208ENST00000589797 POTEB3A0JP26 581 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 POTECB2RU33 542 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 BIRC3Q13489 604 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 SLC9C1Q4G0N8 1177 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 POTEBQ6S5H4 581 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 SP8Q8IXZ3 490 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 SECISBP2LQ93073 1101 aaKnown RBP16.14■□□□□ 0.17
RETREG3-208ENST00000589797 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.14■□□□□ 0.17
RETREG3-208ENST00000589797 ARMCX3Q9UH62 379 aaPredicted RBP16.14■□□□□ 0.17
RETREG3-208ENST00000589797 NWD1Q149M9 1564 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 PRPF6O94906 941 aaKnown RBP16.14■□□□□ 0.17
RETREG3-208ENST00000589797 CDC25BP30305 580 aa16.14■□□□□ 0.17
RETREG3-208ENST00000589797 ATP2C1P98194 919 aaPredicted RBP16.14■□□□□ 0.17
RETREG3-208ENST00000589797 IFFO1Q0D2I5 559 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms