RNA–Protein interactions for RNA: ENST00000589701.2

GFAP-216, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 2,668 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-216ENST00000589701 ROBO3Q96MS0 1386 aa12.32□□□□□ -0.44
GFAP-216ENST00000589701 SLU7O95391 586 aaKnown RBP12.32□□□□□ -0.44
GFAP-216ENST00000589701 SRGNP10124 158 aa12.32□□□□□ -0.44
GFAP-216ENST00000589701 CHRNA5P30532 468 aa12.32□□□□□ -0.44
GFAP-216ENST00000589701 CDC42EP5Q6NZY7 148 aa12.32□□□□□ -0.44
GFAP-216ENST00000589701 ZNF513Q8N8E2 541 aaPredicted RBP12.32□□□□□ -0.44
GFAP-216ENST00000589701 NUP88Q99567 741 aaPredicted RBP12.32□□□□□ -0.44
GFAP-216ENST00000589701 ZMYND12Q9H0C1 365 aa12.32□□□□□ -0.44
GFAP-216ENST00000589701 MTMR4Q9NYA4 1195 aa12.32□□□□□ -0.44
GFAP-216ENST00000589701 MAST2Q6P0Q8 1798 aa12.32□□□□□ -0.44
GFAP-216ENST00000589701 KCNJ18B7U540 433 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 AKR1B15C9JRZ8 316 aaPredicted RBP12.31□□□□□ -0.44
GFAP-216ENST00000589701 GTPBP6O43824 516 aaPredicted RBP12.31□□□□□ -0.44
GFAP-216ENST00000589701 EDIL3O43854 480 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 BMP15O95972 392 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 TXLNAP40222 546 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 TRAPPC10P48553 1259 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 HNRNPH2P55795 449 aaKnown RBP12.31□□□□□ -0.44
GFAP-216ENST00000589701 STK4Q13043 487 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 KCNJ12Q14500 433 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 PPFIBP1Q86W92 1011 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 ZSCAN29Q8IWY8 852 aaPredicted RBP12.31□□□□□ -0.44
GFAP-216ENST00000589701 ANKS1AQ92625 1134 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 POLD4Q9HCU8 107 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 TRIM10Q9UDY6 481 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 SMCHD1A6NHR9 2005 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 TTC36A6NLP5 189 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 USP17L10C9JJH3 530 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 ARHGAP6O43182 974 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 LONP1P36776 959 aaKnown RBP12.31□□□□□ -0.44
GFAP-216ENST00000589701 UBXN1Q04323 297 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 SOGA3Q5TF21 947 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 CABP7Q86V35 215 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 ELOA2Q8IYF1 753 aaPredicted RBP12.31□□□□□ -0.44
GFAP-216ENST00000589701 REXO1Q8N1G1 1221 aaKnown RBP12.31□□□□□ -0.44
GFAP-216ENST00000589701 CHP1Q99653 195 aa12.31□□□□□ -0.44
GFAP-216ENST00000589701 SRRTQ9BXP5 876 aaKnown RBP12.31□□□□□ -0.44
GFAP-216ENST00000589701 USP17L15C9J2P7 530 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 USP17L13C9JLJ4 530 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 USP17L11C9JVI0 530 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 USP17L18D6R9N7 530 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 USP17L22D6RA61 530 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 USP17L17D6RBQ6 530 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 USP17L19D6RCP7 530 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 USP17L20D6RJB6 530 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 KLRC4O43908 158 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 GNAQP50148 359 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 USP17L24Q0WX57 530 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 NONOQ15233 471 aaKnown RBP eCLIP12.3□□□□□ -0.44
GFAP-216ENST00000589701 ZNF658Q5TYW1 1059 aaPredicted RBP12.3□□□□□ -0.44
GFAP-216ENST00000589701 USP17L6PQ6QN14 398 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 SLC30A10Q6XR72 485 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 CCDC148Q8NFR7 591 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 CCDC34Q96HJ3 373 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 MMTAG2Q9BU76 263 aaKnown RBP12.3□□□□□ -0.44
GFAP-216ENST00000589701 SLC39A2Q9NP94 309 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 SERPINB13Q9UIV8 391 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 ATP6V0A2Q9Y487 856 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 GDF11O95390 407 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 OR52Z1P0C646 297 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 HOXA10P31260 410 aaPredicted RBP12.3□□□□□ -0.44
GFAP-216ENST00000589701 ASIC1P78348 528 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 CACNB1Q02641 598 aaPredicted RBP12.3□□□□□ -0.44
GFAP-216ENST00000589701 NBPF9Q3BBW0 867 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 TCP11X2Q5H9J9 407 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 ARL6IP4Q66PJ3 421 aaKnown RBP12.3□□□□□ -0.44
GFAP-216ENST00000589701 APOBEC3HQ6NTF7 200 aaKnown RBP12.3□□□□□ -0.44
GFAP-216ENST00000589701 NEK8Q86SG6 692 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 ADGRF4Q8IZF3 695 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 DNAJC18Q9H819 358 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 TCP11L1Q9NUJ3 509 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.3□□□□□ -0.44
GFAP-216ENST00000589701 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 GAKO14976 1311 aa12.3□□□□□ -0.44
GFAP-216ENST00000589701 CENPFP49454 3210 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 DDTLA6NHG4 134 aaPredicted RBP12.29□□□□□ -0.44
GFAP-216ENST00000589701 SHMT1P34896 483 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 COPB1P53618 953 aaKnown RBP12.29□□□□□ -0.44
GFAP-216ENST00000589701 ERVK-24P63145 666 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 LRRC41Q15345 812 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 ARHGAP29Q52LW3 1261 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 KCNK18Q7Z418 384 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 TRIM47Q96LD4 638 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 SH3GLB2Q9NR46 395 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 ZNF446Q9NWS9 450 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.29□□□□□ -0.44
GFAP-216ENST00000589701 B4DLN1 442 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 STX10O60499 249 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 PBX1P40424 430 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 PDE4DQ08499 809 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 MCM6Q14566 821 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 ECM1Q16610 540 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 CCDC93Q567U6 631 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 C15orf52Q6ZUT6 534 aaKnown RBP12.29□□□□□ -0.44
GFAP-216ENST00000589701 SLF1Q9BQI6 1058 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 SPZ1Q9BXG8 430 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 JMJD4Q9H9V9 463 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 C6orf50Q9HD87 102 aa12.29□□□□□ -0.44
GFAP-216ENST00000589701 SUFUQ9UMX1 484 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms