RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 LRRC37A2A6NM11 1700 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 CHD9Q3L8U1 2897 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 CALML3P27482 149 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 PBX2P40425 430 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 ZNF543Q08ER8 600 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 DUSP28Q4G0W2 176 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 PSRC1Q6PGN9 363 aaPredicted RBP13.88□□□□□ -0.19
MBD1-218ENST00000589541 CLEC4DQ8WXI8 215 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 TTC14Q96N46 770 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 WDR11Q9BZH6 1224 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 ZNF576Q9H609 170 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 UMODL1Q5DID0 1318 aa13.88□□□□□ -0.19
MBD1-218ENST00000589541 B4GALT4O60513 344 aa13.87□□□□□ -0.19
MBD1-218ENST00000589541 PCP11498 1178 aaKnown RBP13.87□□□□□ -0.19
MBD1-218ENST00000589541 SDSP20132 328 aa13.87□□□□□ -0.19
MBD1-218ENST00000589541 MFAP1P55081 439 aaKnown RBP13.87□□□□□ -0.19
MBD1-218ENST00000589541 CCL23P55773 120 aa13.87□□□□□ -0.19
MBD1-218ENST00000589541 RNF207Q6ZRF8 634 aa13.87□□□□□ -0.19
MBD1-218ENST00000589541 ZKSCAN3Q9BRR0 538 aa13.87□□□□□ -0.19
MBD1-218ENST00000589541 NOC4LQ9BVI4 516 aaKnown RBP13.87□□□□□ -0.19
MBD1-218ENST00000589541 PBX4Q9BYU1 374 aa13.87□□□□□ -0.19
MBD1-218ENST00000589541 RNF41Q9H4P4 317 aaPredicted RBP13.87□□□□□ -0.19
MBD1-218ENST00000589541 IL23AQ9NPF7 189 aa13.87□□□□□ -0.19
MBD1-218ENST00000589541 NEDD4P46934 1319 aa13.87□□□□□ -0.19
MBD1-218ENST00000589541 GOLGA8HP0CJ92 632 aa13.86□□□□□ -0.19
MBD1-218ENST00000589541 SNHG28P0DPA3 235 aa13.86□□□□□ -0.19
MBD1-218ENST00000589541 RPS6P62753 249 aaKnown RBP13.86□□□□□ -0.19
MBD1-218ENST00000589541 PDE4DQ08499 809 aa13.86□□□□□ -0.19
MBD1-218ENST00000589541 SMC5Q8IY18 1101 aa13.86□□□□□ -0.19
MBD1-218ENST00000589541 ESR2Q92731 530 aa13.86□□□□□ -0.19
MBD1-218ENST00000589541 SEZ6LQ9BYH1 1024 aa13.86□□□□□ -0.19
MBD1-218ENST00000589541 RWDD1Q9H446 243 aaPredicted RBP13.86□□□□□ -0.19
MBD1-218ENST00000589541 CXXC1Q9P0U4 656 aaPredicted RBP13.86□□□□□ -0.19
MBD1-218ENST00000589541 PNMA2Q9UL42 364 aa13.86□□□□□ -0.19
MBD1-218ENST00000589541 LCTP09848 1927 aa13.86□□□□□ -0.19
MBD1-218ENST00000589541 LOC102724159A0A0B4J2E5 919 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 ZNF213O14771 459 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 FGBP02675 491 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 MYL3P08590 195 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 CPT1AP50416 773 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 AAMPQ13685 434 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 PWP2Q15269 919 aaKnown RBP13.85□□□□□ -0.19
MBD1-218ENST00000589541 USH1GQ495M9 461 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 CWC27Q6UX04 472 aaKnown RBP13.85□□□□□ -0.19
MBD1-218ENST00000589541 OTOP2Q7RTS6 562 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 CHD1LQ86WJ1 897 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 PLEKHM2Q8IWE5 1019 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 OR6J1Q8NGC5 347 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 HERVK_113Q902F9 699 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 YTHDC1Q96MU7 727 aaKnown RBP13.85□□□□□ -0.19
MBD1-218ENST00000589541 WNT8AQ9H1J5 351 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 ALDH8A1Q9H2A2 487 aaPredicted RBP13.85□□□□□ -0.19
MBD1-218ENST00000589541 CPVLQ9H3G5 476 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 DIAPH3Q9NSV4 1193 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 TRMT13Q9NUP7 481 aaKnown RBP13.85□□□□□ -0.19
MBD1-218ENST00000589541 SPTBN5Q9NRC6 3674 aaKnown RBP13.85□□□□□ -0.19
MBD1-218ENST00000589541 WDR19Q8NEZ3 1342 aa13.85□□□□□ -0.19
MBD1-218ENST00000589541 RBM47A0AV96 593 aaKnown RBP13.84□□□□□ -0.19
MBD1-218ENST00000589541 KDM4AO75164 1064 aa13.84□□□□□ -0.19
MBD1-218ENST00000589541 IGHDP01880 384 aa13.84□□□□□ -0.19
MBD1-218ENST00000589541 PURAQ00577 322 aaKnown RBP13.84□□□□□ -0.19
MBD1-218ENST00000589541 NUCB1Q02818 461 aa13.84□□□□□ -0.19
MBD1-218ENST00000589541 PPP2R5BQ15173 497 aa13.84□□□□□ -0.19
MBD1-218ENST00000589541 GPATCH4Q5T3I0 446 aaKnown RBP13.84□□□□□ -0.19
MBD1-218ENST00000589541 DGKHQ86XP1 1220 aa13.84□□□□□ -0.19
MBD1-218ENST00000589541 USP38Q8NB14 1042 aa13.84□□□□□ -0.19
MBD1-218ENST00000589541 MPHOSPH6Q99547 160 aaKnown RBP13.84□□□□□ -0.19
MBD1-218ENST00000589541 UBA5Q9GZZ9 404 aa13.84□□□□□ -0.19
MBD1-218ENST00000589541 MTIF3Q9H2K0 278 aaKnown RBP13.84□□□□□ -0.19
MBD1-218ENST00000589541 PRDM12Q9H4Q4 367 aa13.84□□□□□ -0.19
MBD1-218ENST00000589541 GPHNQ9NQX3 736 aaPredicted RBP13.84□□□□□ -0.19
MBD1-218ENST00000589541 POLR3EQ9NVU0 708 aa13.84□□□□□ -0.19
MBD1-218ENST00000589541 CYP2C9P11712 490 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 EDNRBP24530 442 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 RAB30Q15771 203 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 BRDTQ58F21 947 aaPredicted RBP13.83□□□□□ -0.2
MBD1-218ENST00000589541 FAM47CQ5HY64 1035 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 IQCA1Q86XH1 822 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 PNMA1Q8ND90 353 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 DNERQ8NFT8 737 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 SCFD2Q8WU76 684 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 PPP1R13LQ8WUF5 828 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 SCLYQ96I15 445 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 MTG1Q9BT17 334 aaPredicted RBP13.83□□□□□ -0.2
MBD1-218ENST00000589541 OSBPL3Q9H4L5 887 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 KAT14Q9H8E8 782 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 MSRAQ9UJ68 235 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 TNKSO95271 1327 aa13.83□□□□□ -0.2
MBD1-218ENST00000589541 TTC28Q96AY4 2481 aa13.82□□□□□ -0.2
MBD1-218ENST00000589541 B4E1Z4 1266 aa13.82□□□□□ -0.2
MBD1-218ENST00000589541 SUPT20HL2P0C7V6 817 aa13.82□□□□□ -0.2
MBD1-218ENST00000589541 TXNP10599 105 aaKnown RBP13.82□□□□□ -0.2
MBD1-218ENST00000589541 CDC37Q16543 378 aaPredicted RBP13.82□□□□□ -0.2
MBD1-218ENST00000589541 RPUSD2Q8IZ73 545 aaKnown RBP13.82□□□□□ -0.2
MBD1-218ENST00000589541 PPM1EQ8WY54 764 aa13.82□□□□□ -0.2
MBD1-218ENST00000589541 COPS5Q92905 334 aa13.82□□□□□ -0.2
MBD1-218ENST00000589541 ZSCAN10Q96SZ4 725 aaPredicted RBP13.82□□□□□ -0.2
MBD1-218ENST00000589541 GAS2L1Q99501 681 aaPredicted RBP13.82□□□□□ -0.2
MBD1-218ENST00000589541 NKX2-4Q9H2Z4 354 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms