RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 AKR1B1P15121 316 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 ZNF18P17022 549 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 BMP6P22004 513 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 CRKP46108 304 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 CFAP100Q494V2 611 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 GPATCH4Q5T3I0 446 aaKnown RBP11.25□□□□□ -0.61
VPS25-202ENST00000589219 PRAMEF18Q5VWM3 479 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 ISM2Q6H9L7 571 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 CDC42EP5Q6NZY7 148 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 PDXDC2PQ6P474 469 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 DTHD1Q6ZMT9 781 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 VSTM4Q8IW00 320 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 GRAMD1CQ8IYS0 662 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 MTMR14Q8NCE2 650 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 ZBED3Q96IU2 234 aaPredicted RBP11.25□□□□□ -0.61
VPS25-202ENST00000589219 DDX4Q9NQI0 724 aaKnown RBP11.25□□□□□ -0.61
VPS25-202ENST00000589219 SCAF8Q9UPN6 1271 aaKnown RBP11.25□□□□□ -0.61
VPS25-202ENST00000589219 NFE2L3Q9Y4A8 694 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 MYH8P13535 1937 aa11.25□□□□□ -0.61
VPS25-202ENST00000589219 OR52Z1P0C646 297 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 GOLGA8HP0CJ92 632 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 ATP1A3P13637 1013 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 SHMT1P34896 483 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 GTF2F1P35269 517 aaKnown RBP eCLIP11.24□□□□□ -0.61
VPS25-202ENST00000589219 STAT6P42226 847 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 ZNF543Q08ER8 600 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 SPATA1Q5VX52 437 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 APOBEC3HQ6NTF7 200 aaKnown RBP11.24□□□□□ -0.61
VPS25-202ENST00000589219 USP17L2Q6R6M4 530 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 NEK8Q86SG6 692 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 REXO1Q8N1G1 1221 aaKnown RBP11.24□□□□□ -0.61
VPS25-202ENST00000589219 RASGRP4Q8TDF6 673 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 IDI2Q9BXS1 227 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 GTPBP4Q9BZE4 634 aaKnown RBP11.24□□□□□ -0.61
VPS25-202ENST00000589219 CCSER1Q9C0I3 900 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 DISC1Q9NRI5 854 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 FANCLQ9NW38 375 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.24□□□□□ -0.61
VPS25-202ENST00000589219 MTMR7Q9Y216 660 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 PPP2R3BQ9Y5P8 575 aa11.24□□□□□ -0.61
VPS25-202ENST00000589219 SMCO2A6NFE2 343 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 USP17L5A8MUK1 530 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 PPP1R12BO60237 982 aaPredicted RBP11.23□□□□□ -0.61
VPS25-202ENST00000589219 TUBB4AP04350 444 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 AFMP43652 599 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 ADCY7P51828 1080 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 SREBF2Q12772 1141 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 CUL4BQ13620 913 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 IL17AQ16552 155 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 TPD52L1Q16890 204 aaPredicted RBP11.23□□□□□ -0.61
VPS25-202ENST00000589219 INF2Q27J81 1249 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 MOB2Q70IA6 237 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 FCHSD1Q86WN1 690 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 HOMER1Q86YM7 354 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 LRRC47Q8N1G4 583 aaKnown RBP11.23□□□□□ -0.61
VPS25-202ENST00000589219 CTAGE1Q96RT6 745 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 PIGSQ96S52 555 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 GLT8D2Q9H1C3 349 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 DEFB129Q9H1M3 183 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 SERPINA10Q9UK55 444 aa11.23□□□□□ -0.61
VPS25-202ENST00000589219 ADAMTS3O15072 1205 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 SIPA1L1O43166 1804 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 UBA7P41226 1012 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 TM4SF4P48230 202 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 RGS19P49795 217 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 RBM5P52756 815 aaKnown RBP eCLIP11.22□□□□□ -0.61
VPS25-202ENST00000589219 MLLT1Q03111 559 aaPredicted RBP11.22□□□□□ -0.61
VPS25-202ENST00000589219 SPAG1Q07617 926 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 KCNB1Q14721 858 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 SUPT20HL1Q3ZLR7 823 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 ATRNL1Q5VV63 1379 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 ARMCX5Q6P1M9 558 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 RASSF8Q8NHQ8 419 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 DCAF4Q8WV16 495 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 CCDC47Q96A33 483 aaKnown RBP11.22□□□□□ -0.61
VPS25-202ENST00000589219 NAP1L4Q99733 375 aaKnown RBP11.22□□□□□ -0.61
VPS25-202ENST00000589219 PAXBP1Q9Y5B6 917 aa11.22□□□□□ -0.61
VPS25-202ENST00000589219 FRMPD2Q68DX3 1309 aaPredicted RBP11.21□□□□□ -0.61
VPS25-202ENST00000589219 PNMA6FA0A0J9YX94 578 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 A0A1B0GTH6 734 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 SPDYE2BA6NHP3 402 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 UNCXA6NJT0 531 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 ENTPD3O75355 529 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 SPDYE6P0CI01 402 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 TNNT1P13805 278 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 CDK11BP21127 795 aaKnown RBP11.21□□□□□ -0.61
VPS25-202ENST00000589219 HOXA7P31268 230 aaPredicted RBP11.21□□□□□ -0.61
VPS25-202ENST00000589219 PPP1R2P41236 205 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 INHBEP58166 350 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 TNFAIP1Q13829 316 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 PRKG1Q13976 671 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 ARID5BQ14865 1188 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 CCDC96Q2M329 555 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 LDLRAD1Q5T700 205 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 ZNF658Q5TYW1 1059 aaPredicted RBP11.21□□□□□ -0.61
VPS25-202ENST00000589219 CDKAL1Q5VV42 579 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 RRAGBQ5VZM2 374 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 RASGRP2Q7LDG7 609 aa11.21□□□□□ -0.61
VPS25-202ENST00000589219 MTERF4Q7Z6M4 381 aaKnown RBP11.21□□□□□ -0.61
VPS25-202ENST00000589219 CTU1Q7Z7A3 348 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms