RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CCNT1O60563 726 aaKnown RBP29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 NDUFA8P51970 172 aa29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 CPXCR1Q8N123 301 aa29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 CRYGNQ8WXF5 182 aa29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 TBC1D5Q92609 795 aa29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 TMEM60Q9H2L4 133 aa29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 GBA2Q9HCG7 927 aaPredicted RBP29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 HPSEQ9Y251 543 aa29.62■■■□□ 2.33
SCAMP4-210ENST00000588555 FOSP01100 380 aaPredicted RBP29.61■■■□□ 2.33
SCAMP4-210ENST00000588555 HOXA13P31271 388 aaPredicted RBP29.61■■■□□ 2.33
SCAMP4-210ENST00000588555 MOGSQ13724 837 aa29.61■■■□□ 2.33
SCAMP4-210ENST00000588555 ARL6IP4Q66PJ3 421 aaKnown RBP29.61■■■□□ 2.33
SCAMP4-210ENST00000588555 SPDYE16A6NNV3 312 aaPredicted RBP29.6■■■□□ 2.33
SCAMP4-210ENST00000588555 ITGBL1O95965 494 aaPredicted RBP29.6■■■□□ 2.33
SCAMP4-210ENST00000588555 PFKFB1P16118 471 aa29.6■■■□□ 2.33
SCAMP4-210ENST00000588555 HOXA7P31268 230 aaPredicted RBP29.6■■■□□ 2.33
SCAMP4-210ENST00000588555 CLEC4DQ8WXI8 215 aa29.6■■■□□ 2.33
SCAMP4-210ENST00000588555 SLC10A4Q96EP9 437 aa29.6■■■□□ 2.33
SCAMP4-210ENST00000588555 HOXC10Q9NYD6 342 aa29.6■■■□□ 2.33
SCAMP4-210ENST00000588555 PNMA2Q9UL42 364 aa29.6■■■□□ 2.33
SCAMP4-210ENST00000588555 CELF2O95319 508 aaKnown RBP29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 GSE1Q14687 1217 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 IL17AQ16552 155 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 CHADLQ6NUI6 762 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 GADL1Q6ZQY3 521 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 CSRNP2Q9H175 543 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 A0A0G2JMZ2 1700 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 LAD1O00515 517 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 CFBP00751 764 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 OAZ1P54368 228 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 ZNF445P59923 1031 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 GHRHRQ02643 423 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 PPP4R3AQ6IN85 833 aa29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 ZNF214Q9UL59 606 aaPredicted RBP29.59■■■□□ 2.33
SCAMP4-210ENST00000588555 GCOM1H8Y6P7 765 aaPredicted RBP29.58■■■□□ 2.33
SCAMP4-210ENST00000588555 ATP2A1O14983 1001 aa29.58■■■□□ 2.33
SCAMP4-210ENST00000588555 NEMFO60524 1076 aa29.58■■■□□ 2.33
SCAMP4-210ENST00000588555 POLR2MP0CAP2 368 aa29.58■■■□□ 2.33
SCAMP4-210ENST00000588555 CLSTN2Q9H4D0 955 aa29.58■■■□□ 2.33
SCAMP4-210ENST00000588555 CTDP1Q9Y5B0 961 aaPredicted RBP29.58■■■□□ 2.33
SCAMP4-210ENST00000588555 RBBP6Q7Z6E9 1792 aaKnown RBP29.58■■■□□ 2.33
SCAMP4-210ENST00000588555 SPDYE3A6NKU9 549 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 NFIBO00712 420 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 TDP2O95551 362 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 ALAS1P13196 640 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 SPECC1Q5M775 1068 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 NUP62CLQ9H1M0 184 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 SYCE3A1L190 88 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 SREBF1P36956 1147 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 PRPHP41219 470 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 HSD17B4P51659 736 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 USP11P51784 963 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 TMEM132BQ14DG7 1078 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 C2orf69Q8N8R5 385 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 AGTPBP1Q9UPW5 1226 aa29.57■■■□□ 2.32
SCAMP4-210ENST00000588555 VWA3AA6NCI4 1184 aa29.56■■■□□ 2.32
SCAMP4-210ENST00000588555 MUM1L1Q5H9M0 696 aa29.56■■■□□ 2.32
SCAMP4-210ENST00000588555 CST9Q5W186 159 aa29.56■■■□□ 2.32
SCAMP4-210ENST00000588555 POTEEQ6S8J3 1075 aa29.56■■■□□ 2.32
SCAMP4-210ENST00000588555 SLC37A4O43826 429 aa29.55■■■□□ 2.32
SCAMP4-210ENST00000588555 ARHGAP4P98171 946 aa29.55■■■□□ 2.32
SCAMP4-210ENST00000588555 USP49Q70CQ1 688 aa29.55■■■□□ 2.32
SCAMP4-210ENST00000588555 POTEDQ86YR6 584 aa29.55■■■□□ 2.32
SCAMP4-210ENST00000588555 TRPM7Q96QT4 1865 aa29.55■■■□□ 2.32
SCAMP4-210ENST00000588555 RIPK3Q9Y572 518 aa29.55■■■□□ 2.32
SCAMP4-210ENST00000588555 OR52Z1P0C646 297 aa29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 GCFC2P16383 781 aaKnown RBP29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 CYP3A7-CYP3A51PA0A087WV96 503 aa29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 KINO60870 393 aaKnown RBP29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 CYP3A7P24462 503 aa29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 SNAPC2Q13487 334 aa29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 CAMK4Q16566 473 aa29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 MOXD1Q6UVY6 613 aa29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 FASTKD5Q7L8L6 764 aaKnown RBP29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 FCHSD1Q86WN1 690 aa29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 MCF2L2Q86YR7 1114 aa29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 MBOAT7Q96N66 472 aa29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 MTMR9Q96QG7 549 aa29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 NAP1L4Q99733 375 aaKnown RBP29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 HOMER2Q9NSB8 354 aa29.54■■■□□ 2.32
SCAMP4-210ENST00000588555 ZNF202O95125 648 aa29.53■■■□□ 2.32
SCAMP4-210ENST00000588555 LETM1O95202 739 aaPredicted RBP29.53■■■□□ 2.32
SCAMP4-210ENST00000588555 SNRNP48Q6IEG0 339 aaKnown RBP29.53■■■□□ 2.32
SCAMP4-210ENST00000588555 GPAT2Q6NUI2 795 aa29.53■■■□□ 2.32
SCAMP4-210ENST00000588555 LBX2Q6XYB7 198 aa29.53■■■□□ 2.32
SCAMP4-210ENST00000588555 RBM43Q6ZSC3 357 aaKnown RBP29.53■■■□□ 2.32
SCAMP4-210ENST00000588555 TRERF1Q96PN7 1200 aa29.53■■■□□ 2.32
SCAMP4-210ENST00000588555 KCNH3Q9ULD8 1083 aa29.53■■■□□ 2.32
SCAMP4-210ENST00000588555 SYKP43405 635 aa29.52■■■□□ 2.32
SCAMP4-210ENST00000588555 DTHD1Q6ZMT9 781 aa29.52■■■□□ 2.32
SCAMP4-210ENST00000588555 SAMD3Q8N6K7 520 aa29.52■■■□□ 2.32
SCAMP4-210ENST00000588555 EPSTI1Q96J88 318 aa29.52■■■□□ 2.32
SCAMP4-210ENST00000588555 TEX13BQ9BXU2 312 aa29.52■■■□□ 2.32
SCAMP4-210ENST00000588555 ASCC2Q9H1I8 757 aaPredicted RBP29.52■■■□□ 2.32
SCAMP4-210ENST00000588555 LONP1P36776 959 aaKnown RBP29.52■■■□□ 2.32
SCAMP4-210ENST00000588555 TNMDQ9H2S6 317 aa29.52■■■□□ 2.32
SCAMP4-210ENST00000588555 RNF146Q9NTX7 359 aa29.52■■■□□ 2.32
SCAMP4-210ENST00000588555 FAM13BQ9NYF5 915 aa29.52■■■□□ 2.32
SCAMP4-210ENST00000588555 MAP3K20Q9NYL2 800 aaKnown RBP29.52■■■□□ 2.32
SCAMP4-210ENST00000588555 DDX25Q9UHL0 483 aaKnown RBP29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms