RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 B4GALNT3Q6L9W6 998 aa18.72■□□□□ 0.59
ERCC1-206ENST00000588300 TBC1D10CQ8IV04 446 aa18.72■□□□□ 0.59
ERCC1-206ENST00000588300 ESR2Q92731 530 aa18.72■□□□□ 0.59
ERCC1-206ENST00000588300 SNHG28P0DPA3 235 aa18.71■□□□□ 0.59
ERCC1-206ENST00000588300 DUSP28Q4G0W2 176 aa18.71■□□□□ 0.59
ERCC1-206ENST00000588300 C16orf59Q7L2K0 433 aa18.71■□□□□ 0.59
ERCC1-206ENST00000588300 CHD1LQ86WJ1 897 aa18.71■□□□□ 0.59
ERCC1-206ENST00000588300 WDR19Q8NEZ3 1342 aa18.71■□□□□ 0.59
ERCC1-206ENST00000588300 ACRP10323 421 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 CALML3P27482 149 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 CYP2C18P33260 490 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 NT5C2P49902 561 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 TMEM63BQ5T3F8 832 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 RASIP1Q5U651 963 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 SLC30A10Q6XR72 485 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 RNF207Q6ZRF8 634 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 ZNF365Q70YC5 407 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 CLEC4DQ8WXI8 215 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 TIFAQ96CG3 184 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 MPHOSPH6Q99547 160 aaKnown RBP18.7■□□□□ 0.58
ERCC1-206ENST00000588300 WDR11Q9BZH6 1224 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 HIPK3Q9H422 1215 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 OSBPL3Q9H4L5 887 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 IL23AQ9NPF7 189 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 GRIN2DO15399 1336 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 NEDD4P46934 1319 aa18.7■□□□□ 0.58
ERCC1-206ENST00000588300 ZNF213O14771 459 aa18.69■□□□□ 0.58
ERCC1-206ENST00000588300 GPATCH4Q5T3I0 446 aaKnown RBP18.69■□□□□ 0.58
ERCC1-206ENST00000588300 PLEKHM2Q8IWE5 1019 aa18.69■□□□□ 0.58
ERCC1-206ENST00000588300 COL25A1Q9BXS0 654 aaPredicted RBP18.69■□□□□ 0.58
ERCC1-206ENST00000588300 DIAPH3Q9NSV4 1193 aa18.69■□□□□ 0.58
ERCC1-206ENST00000588300 POLR3EQ9NVU0 708 aa18.69■□□□□ 0.58
ERCC1-206ENST00000588300 CDH23Q9H251 3354 aa18.69■□□□□ 0.58
ERCC1-206ENST00000588300 RBM47A0AV96 593 aaKnown RBP18.68■□□□□ 0.58
ERCC1-206ENST00000588300 B4GALT4O60513 344 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 CPT1AP50416 773 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 PSMC6P62333 389 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 RPS6P62753 249 aaKnown RBP18.68■□□□□ 0.58
ERCC1-206ENST00000588300 NUCB1Q02818 461 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 PDE4DQ08499 809 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 GRIN2CQ14957 1233 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 CCDC178Q5BJE1 867 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 CWC27Q6UX04 472 aaKnown RBP18.68■□□□□ 0.58
ERCC1-206ENST00000588300 IQCA1Q86XH1 822 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 DGKHQ86XP1 1220 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 ZKSCAN3Q9BRR0 538 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 TRPV6Q9H1D0 765 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 MTIF3Q9H2K0 278 aaKnown RBP18.68■□□□□ 0.58
ERCC1-206ENST00000588300 ZNF576Q9H609 170 aa18.68■□□□□ 0.58
ERCC1-206ENST00000588300 HIP1O00291 1037 aa18.67■□□□□ 0.58
ERCC1-206ENST00000588300 DNERQ8NFT8 737 aa18.67■□□□□ 0.58
ERCC1-206ENST00000588300 HERVK_113Q902F9 699 aa18.67■□□□□ 0.58
ERCC1-206ENST00000588300 NOC4LQ9BVI4 516 aaKnown RBP18.67■□□□□ 0.58
ERCC1-206ENST00000588300 PBX4Q9BYU1 374 aa18.67■□□□□ 0.58
ERCC1-206ENST00000588300 UMODL1Q5DID0 1318 aa18.67■□□□□ 0.58
ERCC1-206ENST00000588300 GRXCR1A8MXD5 290 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 B4DLN1 442 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 NKRFO15226 690 aaKnown RBP eCLIP18.66■□□□□ 0.58
ERCC1-206ENST00000588300 KDM4AO75164 1064 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 IGHDP01880 384 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 FGBP02675 491 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 GOLGA8HP0CJ92 632 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 MRPL12P52815 198 aaKnown RBP18.66■□□□□ 0.58
ERCC1-206ENST00000588300 PPP2R5BQ15173 497 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 USH1GQ495M9 461 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 BRDTQ58F21 947 aaPredicted RBP18.66■□□□□ 0.58
ERCC1-206ENST00000588300 PNMA1Q8ND90 353 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 OR6J1Q8NGC5 347 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 YTHDC1Q96MU7 727 aaKnown RBP18.66■□□□□ 0.58
ERCC1-206ENST00000588300 ALDH8A1Q9H2A2 487 aaPredicted RBP18.66■□□□□ 0.58
ERCC1-206ENST00000588300 KAT14Q9H8E8 782 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 GPHNQ9NQX3 736 aaPredicted RBP18.66■□□□□ 0.58
ERCC1-206ENST00000588300 RAD50Q92878 1312 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 EYSQ5T1H1 3165 aa18.66■□□□□ 0.58
ERCC1-206ENST00000588300 MYL3P08590 195 aa18.65■□□□□ 0.58
ERCC1-206ENST00000588300 EDNRBP24530 442 aa18.65■□□□□ 0.58
ERCC1-206ENST00000588300 PBX2P40425 430 aa18.65■□□□□ 0.58
ERCC1-206ENST00000588300 CCL23P55773 120 aa18.65■□□□□ 0.58
ERCC1-206ENST00000588300 PURAQ00577 322 aaKnown RBP18.65■□□□□ 0.58
ERCC1-206ENST00000588300 SCFD2Q8WU76 684 aa18.65■□□□□ 0.58
ERCC1-206ENST00000588300 DSCC1Q9BVC3 393 aa18.65■□□□□ 0.58
ERCC1-206ENST00000588300 UBA5Q9GZZ9 404 aa18.65■□□□□ 0.58
ERCC1-206ENST00000588300 GBF1Q92538 1859 aa18.65■□□□□ 0.58
ERCC1-206ENST00000588300 SUPT20HL2P0C7V6 817 aa18.64■□□□□ 0.57
ERCC1-206ENST00000588300 RAB30Q15771 203 aa18.64■□□□□ 0.57
ERCC1-206ENST00000588300 IMMTQ16891 758 aaKnown RBP18.64■□□□□ 0.57
ERCC1-206ENST00000588300 RPUSD2Q8IZ73 545 aaKnown RBP18.64■□□□□ 0.57
ERCC1-206ENST00000588300 RGS22Q8NE09 1264 aa18.64■□□□□ 0.57
ERCC1-206ENST00000588300 ZSCAN10Q96SZ4 725 aaPredicted RBP18.64■□□□□ 0.57
ERCC1-206ENST00000588300 MTG1Q9BT17 334 aaPredicted RBP18.64■□□□□ 0.57
ERCC1-206ENST00000588300 MAF1Q9H063 256 aa18.64■□□□□ 0.57
ERCC1-206ENST00000588300 WNT8AQ9H1J5 351 aa18.64■□□□□ 0.57
ERCC1-206ENST00000588300 CPVLQ9H3G5 476 aa18.64■□□□□ 0.57
ERCC1-206ENST00000588300 CXXC1Q9P0U4 656 aaPredicted RBP18.64■□□□□ 0.57
ERCC1-206ENST00000588300 MSRAQ9UJ68 235 aa18.64■□□□□ 0.57
ERCC1-206ENST00000588300 MYH6P13533 1939 aa18.64■□□□□ 0.57
ERCC1-206ENST00000588300 SCN10AQ9Y5Y9 1956 aa18.64■□□□□ 0.57
ERCC1-206ENST00000588300 B4E1Z4 1266 aa18.63■□□□□ 0.57
ERCC1-206ENST00000588300 CDC37Q16543 378 aaPredicted RBP18.63■□□□□ 0.57
ERCC1-206ENST00000588300 ASPRV1Q53RT3 343 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms