RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 GJB2P29033 226 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 HOXA13P31271 388 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 HSD17B4P51659 736 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 HMGN5P82970 282 aaKnown RBP12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 CNTN2Q02246 1040 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 MAP2K5Q13163 448 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 UBE2SQ16763 222 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 ZNF792Q3KQV3 632 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 PPP1R18Q6NYC8 613 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 USP17L6PQ6QN14 398 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 DPP9Q86TI2 863 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 MCF2L2Q86YR7 1114 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 SYTL5Q8TDW5 730 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 FGD4Q96M96 766 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 PSTPIP2Q9H939 334 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 SH3GLB2Q9NR46 395 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 KCNJ14Q9UNX9 436 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 RBBP6Q7Z6E9 1792 aaKnown RBP12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 PFASO15067 1338 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 ZNF236Q9UL36 1845 aa12.32□□□□□ -0.44
SMARCA4-213ENST00000587988 SOWAHBA6NEL2 793 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 GCOM1H8Y6P7 765 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 GNRH1P01148 92 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 POLR2MP0CAP2 368 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 GHRHRQ02643 423 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 NPY5RQ15761 445 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 CCL14Q16627 93 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 FAM133AQ8N9E0 248 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 SOCS4Q8WXH5 440 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 WASF1Q92558 559 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 TAAR1Q96RJ0 339 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 ZMYND12Q9H0C1 365 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 RIC8AQ9NPQ8 531 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 FLRT1Q9NZU1 646 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 SMC3Q9UQE7 1217 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 DDX49Q9Y6V7 483 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 PLXNA1Q9UIW2 1896 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 ASTN1O14525 1302 aa12.31□□□□□ -0.44
SMARCA4-213ENST00000587988 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 PIK3CDO00329 1044 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 RGS2P41220 211 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 ADCY7P51828 1080 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 NLRP5P59047 1200 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 GUCY1B3Q02153 619 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 ARHGEF6Q15052 776 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 CTU1Q7Z7A3 348 aaKnown RBP12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 FCHSD1Q86WN1 690 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 FAM184AQ8NB25 1140 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 CCDC148Q8NFR7 591 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 RASGRP4Q8TDF6 673 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 CCDC12Q8WUD4 166 aaPredicted RBP12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 CUL5Q93034 780 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 INTS4Q96HW7 963 aaKnown RBP12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 PGBD1Q96JS3 809 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 PHF20Q9BVI0 1012 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 PRDM10Q9NQV6 1147 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 TMEM260Q9NX78 707 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 PTPN22Q9Y2R2 807 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 PTCH2Q9Y6C5 1203 aa12.3□□□□□ -0.44
SMARCA4-213ENST00000587988 HOXC6P09630 235 aa12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 CLK2P49760 499 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 MRPL12P52815 198 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 KRT40Q6A162 431 aa12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 SAMD3Q8N6K7 520 aa12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 OXER1Q8TDS5 423 aa12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 MAML3Q96JK9 1138 aa12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 C8orf76Q96K31 380 aa12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 APBA2Q99767 749 aa12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 MAF1Q9H063 256 aa12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 C6orf50Q9HD87 102 aa12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 MAP3K20Q9NYL2 800 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 BIN2Q9UBW5 565 aaPredicted RBP12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 PCDHA4Q9UN74 947 aa12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 DIS3Q9Y2L1 958 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 RBM19Q9Y4C8 960 aaKnown RBP12.29□□□□□ -0.44
SMARCA4-213ENST00000587988 M0R2N6 131 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 IGHA2P01877 340 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 XRCC5P13010 732 aaKnown RBP12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 ELNP15502 786 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 XBP1P17861 261 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 GNA11P29992 359 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 ALDH5A1P51649 535 aaPredicted RBP12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 PRMT2P55345 433 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 IRF5Q13568 498 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 JAKMIP3Q5VZ66 844 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 BLIDQ8IZY5 108 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 DAGLBQ8NCG7 672 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 RAET1EQ8TD07 263 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 TRIB2Q92519 343 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 RMDN3Q96TC7 470 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 SLC5A4Q9NY91 659 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 PCDHA6Q9UN73 950 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 PCDHA8Q9Y5H6 950 aa12.28□□□□□ -0.44
SMARCA4-213ENST00000587988 ADCY3O60266 1144 aa12.27□□□□□ -0.45
SMARCA4-213ENST00000587988 MMP1P03956 469 aa12.27□□□□□ -0.45
SMARCA4-213ENST00000587988 EIF2AK2P19525 551 aaKnown RBP12.27□□□□□ -0.45
SMARCA4-213ENST00000587988 UBXN2AP68543 259 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms