RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 UMODL1Q5DID0 1318 aa16.59■□□□□ 0.25
DNMT1-213ENST00000587604 TOP1P11387 765 aaKnown RBP16.58■□□□□ 0.24
DNMT1-213ENST00000587604 ALDH5A1P51649 535 aaPredicted RBP16.58■□□□□ 0.24
DNMT1-213ENST00000587604 CCL23P55773 120 aa16.58■□□□□ 0.24
DNMT1-213ENST00000587604 SYDE2Q5VT97 1194 aa16.58■□□□□ 0.24
DNMT1-213ENST00000587604 OTOP2Q7RTS6 562 aa16.58■□□□□ 0.24
DNMT1-213ENST00000587604 TMEM47Q9BQJ4 181 aa16.58■□□□□ 0.24
DNMT1-213ENST00000587604 WDR11Q9BZH6 1224 aa16.58■□□□□ 0.24
DNMT1-213ENST00000587604 ALDH8A1Q9H2A2 487 aaPredicted RBP16.58■□□□□ 0.24
DNMT1-213ENST00000587604 RBM47A0AV96 593 aaKnown RBP16.57■□□□□ 0.24
DNMT1-213ENST00000587604 FGAP02671 866 aa16.57■□□□□ 0.24
DNMT1-213ENST00000587604 SUPT20HL2P0C7V6 817 aa16.57■□□□□ 0.24
DNMT1-213ENST00000587604 MCMDC2Q4G0Z9 681 aa16.57■□□□□ 0.24
DNMT1-213ENST00000587604 ANKRD45Q5TZF3 282 aa16.57■□□□□ 0.24
DNMT1-213ENST00000587604 TICAM2Q86XR7 235 aa16.57■□□□□ 0.24
DNMT1-213ENST00000587604 ATXN2LQ8WWM7 1075 aaKnown RBP16.57■□□□□ 0.24
DNMT1-213ENST00000587604 PPM1EQ8WY54 764 aa16.57■□□□□ 0.24
DNMT1-213ENST00000587604 WNT8AQ9H1J5 351 aa16.57■□□□□ 0.24
DNMT1-213ENST00000587604 SLC28A3Q9HAS3 691 aa16.57■□□□□ 0.24
DNMT1-213ENST00000587604 TOMM22Q9NS69 142 aa16.57■□□□□ 0.24
DNMT1-213ENST00000587604 POLR3EQ9NVU0 708 aa16.57■□□□□ 0.24
DNMT1-213ENST00000587604 PNMA2Q9UL42 364 aa16.57■□□□□ 0.24
DNMT1-213ENST00000587604 CHD7Q9P2D1 2997 aa16.56■□□□□ 0.24
DNMT1-213ENST00000587604 PTPDC1A2A3K4 754 aa16.56■□□□□ 0.24
DNMT1-213ENST00000587604 NFIBO00712 420 aa16.56■□□□□ 0.24
DNMT1-213ENST00000587604 CPT1AP50416 773 aa16.56■□□□□ 0.24
DNMT1-213ENST00000587604 ADGRE1Q14246 886 aa16.56■□□□□ 0.24
DNMT1-213ENST00000587604 RRP12Q5JTH9 1297 aaKnown RBP16.56■□□□□ 0.24
DNMT1-213ENST00000587604 TTC14Q96N46 770 aa16.56■□□□□ 0.24
DNMT1-213ENST00000587604 NKX2-4Q9H2Z4 354 aa16.56■□□□□ 0.24
DNMT1-213ENST00000587604 GPCPD1Q9NPB8 672 aa16.56■□□□□ 0.24
DNMT1-213ENST00000587604 YBX2Q9Y2T7 364 aaKnown RBP16.56■□□□□ 0.24
DNMT1-213ENST00000587604 FRMPD2Q68DX3 1309 aaPredicted RBP16.55■□□□□ 0.24
DNMT1-213ENST00000587604 PDHBP11177 359 aa16.55■□□□□ 0.24
DNMT1-213ENST00000587604 PDE1AP54750 535 aa16.55■□□□□ 0.24
DNMT1-213ENST00000587604 PURAQ00577 322 aaKnown RBP16.55■□□□□ 0.24
DNMT1-213ENST00000587604 RNF207Q6ZRF8 634 aa16.55■□□□□ 0.24
DNMT1-213ENST00000587604 CLEC4DQ8WXI8 215 aa16.55■□□□□ 0.24
DNMT1-213ENST00000587604 FAM227BQ96M60 508 aa16.55■□□□□ 0.24
DNMT1-213ENST00000587604 GPHNQ9NQX3 736 aaPredicted RBP16.55■□□□□ 0.24
DNMT1-213ENST00000587604 TRMT13Q9NUP7 481 aaKnown RBP16.55■□□□□ 0.24
DNMT1-213ENST00000587604 SLC4A7Q9Y6M7 1214 aa16.55■□□□□ 0.24
DNMT1-213ENST00000587604 SCN10AQ9Y5Y9 1956 aa16.55■□□□□ 0.24
DNMT1-213ENST00000587604 TNKSO95271 1327 aa16.54■□□□□ 0.24
DNMT1-213ENST00000587604 TNFRSF10AO00220 468 aa16.54■□□□□ 0.24
DNMT1-213ENST00000587604 PFKMP08237 780 aa16.54■□□□□ 0.24
DNMT1-213ENST00000587604 HSPD1P10809 573 aaKnown RBP16.54■□□□□ 0.24
DNMT1-213ENST00000587604 PCP11498 1178 aaKnown RBP16.54■□□□□ 0.24
DNMT1-213ENST00000587604 IGFBP4P22692 258 aa16.54■□□□□ 0.24
DNMT1-213ENST00000587604 CALML3P27482 149 aa16.54■□□□□ 0.24
DNMT1-213ENST00000587604 BRDTQ58F21 947 aaPredicted RBP16.54■□□□□ 0.24
DNMT1-213ENST00000587604 VWCEQ96DN2 955 aa16.54■□□□□ 0.24
DNMT1-213ENST00000587604 SCLYQ96I15 445 aa16.54■□□□□ 0.24
DNMT1-213ENST00000587604 MPHOSPH6Q99547 160 aaKnown RBP16.54■□□□□ 0.24
DNMT1-213ENST00000587604 MTG1Q9BT17 334 aaPredicted RBP16.54■□□□□ 0.24
DNMT1-213ENST00000587604 THEGQ9P2T0 379 aa16.54■□□□□ 0.24
DNMT1-213ENST00000587604 ZMYM6O95789 1325 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 A0A0D9SFI3 127 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 NKRFO15226 690 aaKnown RBP eCLIP16.53■□□□□ 0.24
DNMT1-213ENST00000587604 MYL3P08590 195 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 CYP2C9P11712 490 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 RABGGTBP53611 331 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 RPS6P62753 249 aaKnown RBP16.53■□□□□ 0.24
DNMT1-213ENST00000587604 ZNF543Q08ER8 600 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 SLC30A10Q6XR72 485 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 DNERQ8NFT8 737 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 OR6J1Q8NGC5 347 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 ASB2Q96Q27 587 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 PCDHA11Q9Y5I1 949 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 BDP1A6H8Y1 2624 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 SCN5AQ14524 2016 aa16.53■□□□□ 0.24
DNMT1-213ENST00000587604 WDR19Q8NEZ3 1342 aa16.52■□□□□ 0.24
DNMT1-213ENST00000587604 RAD50Q92878 1312 aa16.52■□□□□ 0.24
DNMT1-213ENST00000587604 TRIP12Q14669 1992 aaPredicted RBP16.52■□□□□ 0.24
DNMT1-213ENST00000587604 ZBBXA8MT70 800 aa16.52■□□□□ 0.24
DNMT1-213ENST00000587604 KPNA6O60684 536 aa16.52■□□□□ 0.24
DNMT1-213ENST00000587604 SNHG28P0DPA3 235 aa16.52■□□□□ 0.24
DNMT1-213ENST00000587604 ATP2A2P16615 1042 aaKnown RBP16.52■□□□□ 0.24
DNMT1-213ENST00000587604 EDNRBP24530 442 aa16.52■□□□□ 0.24
DNMT1-213ENST00000587604 PDE4DQ08499 809 aa16.52■□□□□ 0.24
DNMT1-213ENST00000587604 CCDC85BQ15834 202 aaPredicted RBP16.52■□□□□ 0.24
DNMT1-213ENST00000587604 NFRKBQ6P4R8 1299 aa16.52■□□□□ 0.24
DNMT1-213ENST00000587604 MFSD6Q6ZSS7 791 aa16.52■□□□□ 0.24
DNMT1-213ENST00000587604 SCFD2Q8WU76 684 aa16.52■□□□□ 0.24
DNMT1-213ENST00000587604 PRRC2BQ5JSZ5 2229 aaKnown RBP16.51■□□□□ 0.23
DNMT1-213ENST00000587604 A6NJR5 290 aa16.51■□□□□ 0.23
DNMT1-213ENST00000587604 B4DLN1 442 aa16.51■□□□□ 0.23
DNMT1-213ENST00000587604 MYOGP15173 224 aa16.51■□□□□ 0.23
DNMT1-213ENST00000587604 MRPL12P52815 198 aaKnown RBP16.51■□□□□ 0.23
DNMT1-213ENST00000587604 HAND2P61296 217 aa16.51■□□□□ 0.23
DNMT1-213ENST00000587604 MRPS5P82675 430 aaKnown RBP16.51■□□□□ 0.23
DNMT1-213ENST00000587604 HDAC1Q13547 482 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-213ENST00000587604 TTLL4Q14679 1199 aa16.51■□□□□ 0.23
DNMT1-213ENST00000587604 PPP2R5BQ15173 497 aa16.51■□□□□ 0.23
DNMT1-213ENST00000587604 NBPF20Q3BBV1 942 aa16.51■□□□□ 0.23
DNMT1-213ENST00000587604 PPP2R2DQ66LE6 453 aa16.51■□□□□ 0.23
DNMT1-213ENST00000587604 ZNF589Q86UQ0 364 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-213ENST00000587604 RGS22Q8NE09 1264 aa16.51■□□□□ 0.23
DNMT1-213ENST00000587604 CCDC171Q6TFL3 1326 aa16.5■□□□□ 0.23
DNMT1-213ENST00000587604 RFC2P35250 354 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms