RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TEX2Q8IWB9 1127 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 MTMR9Q96QG7 549 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 TANGO6Q9C0B7 1094 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 EMILIN3Q9NT22 766 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 DDX25Q9UHL0 483 aaKnown RBP22.47■■□□□ 1.19
TRIM47-204ENST00000587339 ZHX2Q9Y6X8 837 aa22.47■■□□□ 1.19
TRIM47-204ENST00000587339 UBA7P41226 1012 aa22.46■■□□□ 1.19
TRIM47-204ENST00000587339 USP11P51784 963 aa22.46■■□□□ 1.19
TRIM47-204ENST00000587339 PRKG1Q13976 671 aa22.46■■□□□ 1.19
TRIM47-204ENST00000587339 PIK3CDO00329 1044 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 TXKP42681 527 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 E2F4Q16254 413 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 GRAMD1CQ8IYS0 662 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 PP2D1A8MPX8 630 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 TECP42680 631 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 PLCB2Q00722 1185 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 ISM2Q6H9L7 571 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 LDHDQ86WU2 507 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 RASSF8Q8NHQ8 419 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.45■■□□□ 1.182e-6■■□□□ 12.8
TRIM47-204ENST00000587339 PDLIM2Q96JY6 352 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 CCSER1Q9C0I3 900 aa22.45■■□□□ 1.18
TRIM47-204ENST00000587339 MRPL11Q9Y3B7 192 aaKnown RBP22.45■■□□□ 1.18
TRIM47-204ENST00000587339 ADM5C9JUS6 153 aa22.44■■□□□ 1.18
TRIM47-204ENST00000587339 USP2O75604 605 aaPredicted RBP22.44■■□□□ 1.18
TRIM47-204ENST00000587339 FLOT1O75955 427 aa22.44■■□□□ 1.18
TRIM47-204ENST00000587339 PRR29P0C7W0 189 aa22.44■■□□□ 1.18
TRIM47-204ENST00000587339 HOXA13P31271 388 aaPredicted RBP22.44■■□□□ 1.18
TRIM47-204ENST00000587339 KARSQ15046 597 aaKnown RBP22.44■■□□□ 1.18
TRIM47-204ENST00000587339 IQCB1Q15051 598 aa22.44■■□□□ 1.18
TRIM47-204ENST00000587339 NOL9Q5SY16 702 aaKnown RBP22.44■■□□□ 1.18
TRIM47-204ENST00000587339 USP50Q70EL3 339 aaPredicted RBP22.44■■□□□ 1.18
TRIM47-204ENST00000587339 KRT26Q7Z3Y9 468 aa22.44■■□□□ 1.18
TRIM47-204ENST00000587339 SMARCE1Q969G3 411 aa22.44■■□□□ 1.18
TRIM47-204ENST00000587339 PAGE5Q96GU1 130 aa22.44■■□□□ 1.18
TRIM47-204ENST00000587339 P2RX7Q99572 595 aaKnown RBP22.44■■□□□ 1.18
TRIM47-204ENST00000587339 RPAP3Q9H6T3 665 aaPredicted RBP22.44■■□□□ 1.18
TRIM47-204ENST00000587339 POLR2AP24928 1970 aaKnown RBP22.44■■□□□ 1.18
TRIM47-204ENST00000587339 ABCB11O95342 1321 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 ZC3H4Q9UPT8 1303 aaKnown RBP22.43■■□□□ 1.18
TRIM47-204ENST00000587339 GRIN3BO60391 1043 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 CFBP00751 764 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 ICAM1P05362 532 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 EPHX2P34913 555 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 AFMP43652 599 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 TMEM266Q2M3C6 531 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 NT5DC1Q5TFE4 455 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 DLK2Q6UY11 383 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 SH3RF1Q7Z6J0 888 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 IGSF22Q8N9C0 903 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 DISC1Q9NRI5 854 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 CCDC39Q9UFE4 941 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 BECN2A8MW95 431 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 GOLGA6L19H0YKK7 550 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 PPP1R12BO60237 982 aaPredicted RBP22.43■■□□□ 1.18
TRIM47-204ENST00000587339 STAT6P42226 847 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 ARHGAP4P98171 946 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 CRYGNQ8WXF5 182 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 RAB34Q9BZG1 259 aa22.43■■□□□ 1.18
TRIM47-204ENST00000587339 GLTPD2A6NH11 291 aa22.42■■□□□ 1.18
TRIM47-204ENST00000587339 C19orf81C9J6K1 198 aa22.42■■□□□ 1.18
TRIM47-204ENST00000587339 SREBF1P36956 1147 aa22.42■■□□□ 1.18
TRIM47-204ENST00000587339 SARSP49591 514 aaKnown RBP22.42■■□□□ 1.18
TRIM47-204ENST00000587339 FXR2P51116 673 aaKnown RBP eCLIP22.42■■□□□ 1.18
TRIM47-204ENST00000587339 MOXD1Q6UVY6 613 aa22.42■■□□□ 1.18
TRIM47-204ENST00000587339 ZC3H15Q8WU90 426 aaKnown RBP22.42■■□□□ 1.18
TRIM47-204ENST00000587339 CCPG1Q9ULG6 757 aa22.42■■□□□ 1.18
TRIM47-204ENST00000587339 MYH7BA7E2Y1 1941 aa22.42■■□□□ 1.18
TRIM47-204ENST00000587339 ZNF536O15090 1300 aa22.42■■□□□ 1.18
TRIM47-204ENST00000587339 GCOM1H8Y6P7 765 aaPredicted RBP22.41■■□□□ 1.18
TRIM47-204ENST00000587339 MARCH6O60337 910 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 SMC2O95347 1197 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 POLR2MP0CAP2 368 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 HMGCS2P54868 508 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 RRAGBQ5VZM2 374 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 PDXDC2PQ6P474 469 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 SPATA20Q8TB22 786 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 AGBL1Q96MI9 1066 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 PPP1R9AQ9ULJ8 1098 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 CYP3A7-CYP3A51PA0A087WV96 503 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 CYP3A7P24462 503 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 CABP7Q86V35 215 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 FCHSD1Q86WN1 690 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 TRIM44Q96DX7 344 aaPredicted RBP22.41■■□□□ 1.18
TRIM47-204ENST00000587339 C12orf42Q96LP6 360 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 BPIFA3Q9BQP9 254 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 TTC12Q9H892 705 aaPredicted RBP22.41■■□□□ 1.18
TRIM47-204ENST00000587339 SLC38A10Q9HBR0 1119 aa22.41■■□□□ 1.18
TRIM47-204ENST00000587339 ADCY5O95622 1261 aa22.4■■□□□ 1.18
TRIM47-204ENST00000587339 MAP3K9P80192 1104 aa22.4■■□□□ 1.18
TRIM47-204ENST00000587339 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.4■■□□□ 1.18
TRIM47-204ENST00000587339 DHX40Q8IX18 779 aaKnown RBP22.4■■□□□ 1.18
TRIM47-204ENST00000587339 TRIML1Q8N9V2 468 aa22.4■■□□□ 1.18
TRIM47-204ENST00000587339 TBC1D5Q92609 795 aa22.4■■□□□ 1.18
TRIM47-204ENST00000587339 HAS1Q92839 578 aa22.4■■□□□ 1.18
TRIM47-204ENST00000587339 LRWD1Q9UFC0 647 aa22.4■■□□□ 1.18
TRIM47-204ENST00000587339 MAN1B1Q9UKM7 699 aa22.4■■□□□ 1.18
TRIM47-204ENST00000587339 VGLL4Q14135 290 aa22.39■■□□□ 1.18
TRIM47-204ENST00000587339 PDIA5Q14554 519 aa22.39■■□□□ 1.18
TRIM47-204ENST00000587339 CPXCR1Q8N123 301 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms