RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 LRRC41Q15345 812 aa17.19■□□□□ 0.34
ATG4D-207ENST00000587256 RNF180Q86T96 592 aa17.19■□□□□ 0.34
ATG4D-207ENST00000587256 SGMS1Q86VZ5 419 aa17.19■□□□□ 0.34
ATG4D-207ENST00000587256 RGS22Q8NE09 1264 aa17.19■□□□□ 0.34
ATG4D-207ENST00000587256 LZTS2Q9BRK4 669 aa17.19■□□□□ 0.34
ATG4D-207ENST00000587256 SENP6Q9GZR1 1112 aaPredicted RBP17.19■□□□□ 0.34
ATG4D-207ENST00000587256 SEC63Q9UGP8 760 aaKnown RBP17.19■□□□□ 0.34
ATG4D-207ENST00000587256 SNX14Q9Y5W7 946 aa17.19■□□□□ 0.34
ATG4D-207ENST00000587256 SYNRGQ9UMZ2 1314 aa17.19■□□□□ 0.34
ATG4D-207ENST00000587256 CEP290O15078 2479 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 LOC102724159A0A0B4J2E5 919 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 PNMA6FA0A0J9YX94 578 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 B4DLN1 442 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 CYTH3O43739 400 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 PLEKHA8P1O95397 391 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 MRPL12P52815 198 aaKnown RBP17.18■□□□□ 0.34
ATG4D-207ENST00000587256 EXOSC10Q01780 885 aaKnown RBP17.18■□□□□ 0.34
ATG4D-207ENST00000587256 PDE4DQ08499 809 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 PWP2Q15269 919 aaKnown RBP17.18■□□□□ 0.34
ATG4D-207ENST00000587256 BLOC1S2Q6QNY1 142 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 NOL8Q76FK4 1167 aaKnown RBP17.18■□□□□ 0.34
ATG4D-207ENST00000587256 C7orf61Q8IZ16 206 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 KCNB2Q92953 911 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 RRP36Q96EU6 259 aaKnown RBP17.18■□□□□ 0.34
ATG4D-207ENST00000587256 SPZ1Q9BXG8 430 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 MAF1Q9H063 256 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 KATNBL1Q9H079 304 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 VTA1Q9NP79 307 aa17.18■□□□□ 0.34
ATG4D-207ENST00000587256 H0YGN5 161 aa17.17■□□□□ 0.34
ATG4D-207ENST00000587256 EPB41L2O43491 1005 aaKnown RBP17.17■□□□□ 0.34
ATG4D-207ENST00000587256 DUSP11O75319 330 aaKnown RBP17.17■□□□□ 0.34
ATG4D-207ENST00000587256 CFBP00751 764 aa17.17■□□□□ 0.34
ATG4D-207ENST00000587256 CPA1P15085 419 aa17.17■□□□□ 0.34
ATG4D-207ENST00000587256 ADCYAP1R1P41586 468 aa17.17■□□□□ 0.34
ATG4D-207ENST00000587256 APOA5Q6Q788 366 aa17.17■□□□□ 0.34
ATG4D-207ENST00000587256 DNERQ8NFT8 737 aa17.17■□□□□ 0.34
ATG4D-207ENST00000587256 SYTL5Q8TDW5 730 aaPredicted RBP17.17■□□□□ 0.34
ATG4D-207ENST00000587256 SPC25Q9HBM1 224 aa17.17■□□□□ 0.34
ATG4D-207ENST00000587256 NAP1L2Q9ULW6 460 aaPredicted RBP17.17■□□□□ 0.34
ATG4D-207ENST00000587256 ALPK3Q96L96 1907 aa17.17■□□□□ 0.34
ATG4D-207ENST00000587256 KLF18A0A0U1RQI7 1052 aa17.16■□□□□ 0.34
ATG4D-207ENST00000587256 ZBTB43O43298 467 aa17.16■□□□□ 0.34
ATG4D-207ENST00000587256 ADCY6O43306 1168 aa17.16■□□□□ 0.34
ATG4D-207ENST00000587256 ADAMTS4O75173 837 aa17.16■□□□□ 0.34
ATG4D-207ENST00000587256 C6orf222P0C671 652 aaPredicted RBP17.16■□□□□ 0.34
ATG4D-207ENST00000587256 PSMA5P28066 241 aa17.16■□□□□ 0.34
ATG4D-207ENST00000587256 ATN1P54259 1190 aaPredicted RBP17.16■□□□□ 0.34
ATG4D-207ENST00000587256 TNFAIP2Q03169 654 aa17.16■□□□□ 0.34
ATG4D-207ENST00000587256 FANCBQ8NB91 859 aa17.16■□□□□ 0.34
ATG4D-207ENST00000587256 MORC4Q8TE76 937 aa17.16■□□□□ 0.34
ATG4D-207ENST00000587256 TBC1D5Q92609 795 aa17.16■□□□□ 0.34
ATG4D-207ENST00000587256 FERMT2Q96AC1 680 aa17.16■□□□□ 0.34
ATG4D-207ENST00000587256 BAZ2BQ9UIF8 2168 aaKnown RBP17.15■□□□□ 0.34
ATG4D-207ENST00000587256 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.15■□□□□ 0.34
ATG4D-207ENST00000587256 GOLGA8AA7E2F4 631 aa17.15■□□□□ 0.34
ATG4D-207ENST00000587256 GOLGA8BA8MQT2 603 aa17.15■□□□□ 0.34
ATG4D-207ENST00000587256 CASTP20810 708 aaKnown RBP17.15■□□□□ 0.34
ATG4D-207ENST00000587256 RTN1Q16799 776 aa17.15■□□□□ 0.34
ATG4D-207ENST00000587256 LRRC26Q2I0M4 334 aa17.15■□□□□ 0.34
ATG4D-207ENST00000587256 TMTC3Q6ZXV5 915 aa17.15■□□□□ 0.34
ATG4D-207ENST00000587256 TLK2Q86UE8 772 aa17.15■□□□□ 0.34
ATG4D-207ENST00000587256 CMTR1Q8N1G2 835 aaKnown RBP17.15■□□□□ 0.34
ATG4D-207ENST00000587256 NSUN6Q8TEA1 469 aaKnown RBP17.15■□□□□ 0.34
ATG4D-207ENST00000587256 PDGFCQ9NRA1 345 aa17.15■□□□□ 0.34
ATG4D-207ENST00000587256 RBM28Q9NW13 759 aaKnown RBP17.15■□□□□ 0.34
ATG4D-207ENST00000587256 COL20A1Q9P218 1284 aa17.15■□□□□ 0.34
ATG4D-207ENST00000587256 OPLAHO14841 1288 aa17.14■□□□□ 0.33
ATG4D-207ENST00000587256 RPS6KB1P23443 525 aa17.14■□□□□ 0.33
ATG4D-207ENST00000587256 EDNRBP24530 442 aa17.14■□□□□ 0.33
ATG4D-207ENST00000587256 SMARCA1P28370 1054 aa17.14■□□□□ 0.33
ATG4D-207ENST00000587256 HOXA13P31271 388 aaPredicted RBP17.14■□□□□ 0.33
ATG4D-207ENST00000587256 HSD17B4P51659 736 aa17.14■□□□□ 0.33
ATG4D-207ENST00000587256 Q6ZUG5 572 aa17.14■□□□□ 0.33
ATG4D-207ENST00000587256 CCDC82Q8N4S0 544 aa17.14■□□□□ 0.33
ATG4D-207ENST00000587256 SRBD1Q8N5C6 995 aaKnown RBP17.14■□□□□ 0.33
ATG4D-207ENST00000587256 TAAR1Q96RJ0 339 aa17.14■□□□□ 0.33
ATG4D-207ENST00000587256 RMDN3Q96TC7 470 aa17.14■□□□□ 0.33
ATG4D-207ENST00000587256 BRPF3Q9ULD4 1205 aa17.14■□□□□ 0.33
ATG4D-207ENST00000587256 PHF24Q9UPV7 400 aa17.14■□□□□ 0.33
ATG4D-207ENST00000587256 MYADML2A6NDP7 307 aa17.13■□□□□ 0.33
ATG4D-207ENST00000587256 SMPD1P17405 629 aa17.13■□□□□ 0.33
ATG4D-207ENST00000587256 EIF2AK2P19525 551 aaKnown RBP17.13■□□□□ 0.33
ATG4D-207ENST00000587256 GJA9P57773 515 aa17.13■□□□□ 0.33
ATG4D-207ENST00000587256 ARHGEF16Q5VV41 709 aa17.13■□□□□ 0.33
ATG4D-207ENST00000587256 IQSEC1Q6DN90 963 aa17.13■□□□□ 0.33
ATG4D-207ENST00000587256 TAPT1Q6NXT6 567 aa17.13■□□□□ 0.33
ATG4D-207ENST00000587256 BRF1Q92994 677 aa17.13■□□□□ 0.33
ATG4D-207ENST00000587256 USP26Q9BXU7 913 aa17.13■□□□□ 0.33
ATG4D-207ENST00000587256 AP5M1Q9H0R1 490 aa17.13■□□□□ 0.33
ATG4D-207ENST00000587256 UPF3AQ9H1J1 476 aaKnown RBP17.13■□□□□ 0.33
ATG4D-207ENST00000587256 A0A1W2PQ45 241 aaPredicted RBP17.12■□□□□ 0.33
ATG4D-207ENST00000587256 A0A1W2PQY0 241 aa17.12■□□□□ 0.33
ATG4D-207ENST00000587256 hCG_1642624A0A1W2PR95 340 aa17.12■□□□□ 0.33
ATG4D-207ENST00000587256 GCOM1H8Y6P7 765 aaPredicted RBP17.12■□□□□ 0.33
ATG4D-207ENST00000587256 POLR2MP0CAP2 368 aa17.12■□□□□ 0.33
ATG4D-207ENST00000587256 CST5P28325 142 aaPredicted RBP17.12■□□□□ 0.33
ATG4D-207ENST00000587256 ACLYP53396 1101 aa17.12■□□□□ 0.33
ATG4D-207ENST00000587256 RCAN1P53805 252 aa17.12■□□□□ 0.33
ATG4D-207ENST00000587256 RTP1P59025 263 aa17.12■□□□□ 0.33
ATG4D-207ENST00000587256 GHRHRQ02643 423 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms