RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 EFCC1Q9HA90 598 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 SLC38A10Q9HBR0 1119 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 BTBD7Q9P203 1132 aa9.36□□□□□ -0.91
SMAD4-204ENST00000586253 TNPO2O14787 897 aaKnown RBP9.35□□□□□ -0.91
SMAD4-204ENST00000586253 ZBED4O75132 1171 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 FMNL1O95466 1100 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-204ENST00000586253 SLC25A27O95847 323 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 RPS6KB1P23443 525 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 CTGFP29279 349 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 IKQ13123 557 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-204ENST00000586253 COL9A3Q14050 684 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-204ENST00000586253 GRM4Q14833 912 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 TMEM132BQ14DG7 1078 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 Q3C1V9 767 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 RIOX2Q8IUF8 465 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 KIFC2Q96AC6 838 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 COA7Q96BR5 231 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 THAP11Q96EK4 314 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 TEX13BQ9BXU2 312 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 ARHGAP39Q9C0H5 1083 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 SENP2Q9HC62 589 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 PKD2L1Q9P0L9 805 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 PNMA2Q9UL42 364 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 ZNF214Q9UL59 606 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-204ENST00000586253 PRR12Q9ULL5 1215 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 ISY1Q9ULR0 285 aaKnown RBP9.35□□□□□ -0.91
SMAD4-204ENST00000586253 MTMR7Q9Y216 660 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 TRIM17Q9Y577 477 aa9.35□□□□□ -0.91
SMAD4-204ENST00000586253 FRMPD2Q68DX3 1309 aaPredicted RBP9.34□□□□□ -0.91
SMAD4-204ENST00000586253 ZSWIM8A7E2V4 1837 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
SMAD4-204ENST00000586253 CCDC69A6NI79 296 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 CALM1P0DP23 149 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 CALM2P0DP24 149 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 CALM3P0DP25 149 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 CASTP20810 708 aaKnown RBP9.34□□□□□ -0.91
SMAD4-204ENST00000586253 KIF5BP33176 963 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 STAT3P40763 770 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 RCAN1P53805 252 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 CAP1Q01518 475 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 COL13A1Q5TAT6 717 aaPredicted RBP9.34□□□□□ -0.91
SMAD4-204ENST00000586253 SYDE2Q5VT97 1194 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 TTBK2Q6IQ55 1244 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 NFXL1Q6ZNB6 911 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 RUFY3Q7L099 469 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 RASGRP2Q7LDG7 609 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 GPR142Q7Z601 462 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 CCAR1Q8IX12 1150 aaKnown RBP9.34□□□□□ -0.91
SMAD4-204ENST00000586253 ZNF654Q8IZM8 581 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 SOCS4Q8WXH5 440 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 MOV10L1Q9BXT6 1211 aaKnown RBP9.34□□□□□ -0.91
SMAD4-204ENST00000586253 AGXT2Q9BYV1 514 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 RANBP17Q9H2T7 1088 aaKnown RBP9.34□□□□□ -0.91
SMAD4-204ENST00000586253 MROH8Q9H579 483 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 GPCPD1Q9NPB8 672 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 SRRDQ9UH36 339 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 MAD2L2Q9UI95 211 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 CTDP1Q9Y5B0 961 aaPredicted RBP9.34□□□□□ -0.91
SMAD4-204ENST00000586253 SLC12A7Q9Y666 1083 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 DOCK3Q8IZD9 2030 aa9.34□□□□□ -0.91
SMAD4-204ENST00000586253 ZNF236Q9UL36 1845 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 TNFRSF10AO00220 468 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 STRNO43815 780 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 PEX10O60683 326 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 ICAM1P05362 532 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 ERCC3P19447 782 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 SMARCA1P28370 1054 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 GNAQP50148 359 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 FGD1P98174 961 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 IRF5Q13568 498 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 PLS1Q14651 629 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 TKFCQ3LXA3 575 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 FBXO46Q6PJ61 603 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-204ENST00000586253 PLEKHH3Q7Z736 793 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 ABRAQ8N0Z2 381 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 CTCFLQ8NI51 663 aaPredicted RBP9.33□□□□□ -0.92
SMAD4-204ENST00000586253 LZTS2Q9BRK4 669 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 LRRC2Q9BYS8 371 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 PORCNQ9H237 461 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 GJD2Q9UKL4 321 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 PTPN22Q9Y2R2 807 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 CYP46A1Q9Y6A2 500 aa9.33□□□□□ -0.92
SMAD4-204ENST00000586253 ZNF536O15090 1300 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 SLC15A5A6NIM6 579 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 GOLGA8HP0CJ92 632 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 XRCC5P13010 732 aaKnown RBP9.32□□□□□ -0.92
SMAD4-204ENST00000586253 SLC16A2P36021 539 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 EVCP57679 992 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 PRKCZQ05513 592 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 GRB14Q14449 540 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 PPP2R5BQ15173 497 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 PKDCCQ504Y2 493 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 MORN1Q5T089 497 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 SNRNP48Q6IEG0 339 aaKnown RBP9.32□□□□□ -0.92
SMAD4-204ENST00000586253 APOA5Q6Q788 366 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 SYNE3Q6ZMZ3 975 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 Q6ZUG5 572 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 NCAPG2Q86XI2 1143 aa9.32□□□□□ -0.92
SMAD4-204ENST00000586253 STAG2Q8N3U4 1231 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms