RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 RAC2P15153 192 aa3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 RTP1P59025 263 aa3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 MAP4K2Q12851 820 aa3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 LONRF2Q1L5Z9 754 aa3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 TIGD5Q53EQ6 642 aa3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 SLC35F1Q5T1Q4 408 aa3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 FOXB2Q5VYV0 432 aa3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 DENND5AQ6IQ26 1287 aa3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 ATG4DQ86TL0 474 aaPredicted RBP3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 NOP9Q86U38 636 aaKnown RBP3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 SPPL2CQ8IUH8 684 aa3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 KCTD13Q8WZ19 329 aa3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 C19orf44Q9H6X5 657 aa3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 CWC22Q9HCG8 908 aaKnown RBP3.72□□□□□ -1.81
RPRD1A-204ENST00000585953 NPHP3-ACAD11A0A0J9YXS1 232 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 A0A1W2PQ45 241 aaPredicted RBP3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 A0A1W2PQY0 241 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 TBC1D8O95759 1140 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 PAMP19021 973 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 TRHRP34981 398 aaPredicted RBP3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 LAPTM5Q13571 262 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 HSF5Q4G112 596 aaPredicted RBP3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 HLA-DQA1Q5Y7H0 255 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 NSMFQ6X4W1 530 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 JAZF1Q86VZ6 243 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 SH3TC2Q8TF17 1288 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 MYLIPQ8WY64 445 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 EXOC2Q96KP1 924 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 JMJD8Q96S16 334 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 KANSL2Q9H9L4 492 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 RAPGEFL1Q9UHV5 662 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 PTCH2Q9Y6C5 1203 aa3.71□□□□□ -1.81
RPRD1A-204ENST00000585953 CCDC180Q9P1Z9 1646 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 TRBV23OR9-2A0A075B6M9 112 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 NRDCO43847 1150 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 AFMP43652 599 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 TESK1Q15569 626 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 FAM209AQ5JX71 171 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 ACBD5Q5T8D3 534 aaPredicted RBP3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 FYB2Q5VWT5 728 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 MBLAC2Q68D91 279 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 CPNE8Q86YQ8 564 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 CCDC103Q8IW40 242 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 PPIL6Q8IXY8 311 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 LILRA2Q8N149 483 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 RNPC3Q96LT9 517 aaKnown RBP3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 MMP19Q99542 508 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 PLCD4Q9BRC7 762 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 TMEFF2Q9UIK5 374 aaPredicted RBP3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 TAF6LQ9Y6J9 622 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 CARMIL2Q6F5E8 1435 aa3.71□□□□□ -1.82
RPRD1A-204ENST00000585953 TRBV23-1A0A0A0MS06 115 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 ARNTLO00327 626 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 MEFVO15553 781 aaPredicted RBP3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 PSPNO60542 156 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 SQSTM1Q13501 440 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 SLC14A2Q15849 920 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 TMEM67Q5HYA8 995 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 ZC3H12BQ5HYM0 836 aaKnown RBP3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 E4F1Q66K89 784 aaPredicted RBP3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 GIMAP6Q6P9H5 292 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 JAMLQ86YT9 394 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 SCUBE1Q8IWY4 988 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 ZSWIM2Q8NEG5 633 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 ABHD4Q8TB40 342 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 KIRREL1Q96J84 757 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 SLC26A8Q96RN1 970 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 CDC6Q99741 560 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 MRPL42Q9Y6G3 142 aaKnown RBP3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 CC2D2AQ9P2K1 1620 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 WTIPA6NIX2 430 aaPredicted RBP3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 L1CAMP32004 1257 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 KCNAB2Q13303 367 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 KIR3DS1Q14943 382 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 NTRK3Q16288 839 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 INF2Q27J81 1249 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 GALNT18Q6P9A2 607 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 NLRX1Q86UT6 975 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 SIAH1Q8IUQ4 282 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 KISS1RQ969F8 398 aaPredicted RBP3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 SHISA4Q96DD7 197 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 TOX2Q96NM4 488 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 DHRS4Q9BTZ2 278 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 RNF32Q9H0A6 362 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 IMPACTQ9P2X3 320 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 GPR160Q9UJ42 338 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 MRPS23Q9Y3D9 190 aaKnown RBP3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 TBX22Q9Y458 520 aa3.7□□□□□ -1.82
RPRD1A-204ENST00000585953 BLACEA4D250 179 aa3.69□□□□□ -1.82
RPRD1A-204ENST00000585953 LTBRP36941 435 aa3.69□□□□□ -1.82
RPRD1A-204ENST00000585953 SUMO1P63165 101 aaKnown RBP3.69□□□□□ -1.82
RPRD1A-204ENST00000585953 USP53Q70EK8 1073 aa3.69□□□□□ -1.82
RPRD1A-204ENST00000585953 DIO2Q92813 273 aa3.69□□□□□ -1.82
RPRD1A-204ENST00000585953 IPO9Q96P70 1041 aaKnown RBP3.69□□□□□ -1.82
RPRD1A-204ENST00000585953 TMEM260Q9NX78 707 aa3.69□□□□□ -1.82
RPRD1A-204ENST00000585953 NPFFR2Q9Y5X5 522 aa3.69□□□□□ -1.82
RPRD1A-204ENST00000585953 C7orf72A4D263 438 aa3.69□□□□□ -1.82
RPRD1A-204ENST00000585953 GALK1P51570 392 aa3.69□□□□□ -1.82
RPRD1A-204ENST00000585953 CORO7P57737 925 aa3.69□□□□□ -1.82
RPRD1A-204ENST00000585953 SNX17Q15036 470 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms