RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 PDE4DQ08499 809 aa21.22■□□□□ 0.99
HMG20B-216ENST00000585900 FSCN1Q16658 493 aaKnown RBP21.22■□□□□ 0.99
HMG20B-216ENST00000585900 KIAA1211Q6ZU35 1233 aa21.22■□□□□ 0.99
HMG20B-216ENST00000585900 ADGRF4Q8IZF3 695 aa21.22■□□□□ 0.99
HMG20B-216ENST00000585900 CPVLQ9H3G5 476 aa21.22■□□□□ 0.99
HMG20B-216ENST00000585900 PDGFCQ9NRA1 345 aa21.22■□□□□ 0.99
HMG20B-216ENST00000585900 Q9Y3F1 56 aa21.22■□□□□ 0.99
HMG20B-216ENST00000585900 DDX49Q9Y6V7 483 aaKnown RBP21.22■□□□□ 0.99
HMG20B-216ENST00000585900 ABCB11O95342 1321 aa21.22■□□□□ 0.99
HMG20B-216ENST00000585900 ERICH2A1L162 156 aa21.21■□□□□ 0.99
HMG20B-216ENST00000585900 TLR3O15455 904 aaKnown RBP21.21■□□□□ 0.99
HMG20B-216ENST00000585900 DYNC1LI2O43237 492 aaPredicted RBP21.21■□□□□ 0.99
HMG20B-216ENST00000585900 TAPT1Q6NXT6 567 aa21.21■□□□□ 0.99
HMG20B-216ENST00000585900 DEFB123Q8N688 67 aa21.21■□□□□ 0.99
HMG20B-216ENST00000585900 DNERQ8NFT8 737 aa21.21■□□□□ 0.99
HMG20B-216ENST00000585900 MAF1Q9H063 256 aa21.21■□□□□ 0.99
HMG20B-216ENST00000585900 ARVCFO00192 962 aa21.2■□□□□ 0.98
HMG20B-216ENST00000585900 SGSM2O43147 1006 aa21.2■□□□□ 0.98
HMG20B-216ENST00000585900 FPGSQ05932 587 aa21.2■□□□□ 0.98
HMG20B-216ENST00000585900 FAAP100Q0VG06 881 aa21.2■□□□□ 0.98
HMG20B-216ENST00000585900 SART3Q15020 963 aaKnown RBP21.2■□□□□ 0.98
HMG20B-216ENST00000585900 RGS22Q8NE09 1264 aa21.2■□□□□ 0.98
HMG20B-216ENST00000585900 CTAGE5O15320 804 aa21.19■□□□□ 0.98
HMG20B-216ENST00000585900 CYP21A2P08686 494 aa21.19■□□□□ 0.98
HMG20B-216ENST00000585900 PTH1RQ03431 593 aa21.19■□□□□ 0.98
HMG20B-216ENST00000585900 DUSP28Q4G0W2 176 aa21.19■□□□□ 0.98
HMG20B-216ENST00000585900 CXCL17Q6UXB2 119 aa21.19■□□□□ 0.98
HMG20B-216ENST00000585900 FBXO11Q86XK2 927 aa21.19■□□□□ 0.98
HMG20B-216ENST00000585900 MCF2L2Q86YR7 1114 aa21.19■□□□□ 0.98
HMG20B-216ENST00000585900 WDR11Q9BZH6 1224 aa21.19■□□□□ 0.98
HMG20B-216ENST00000585900 LCTP09848 1927 aa21.18■□□□□ 0.98
HMG20B-216ENST00000585900 IFIT3O14879 490 aaKnown RBP21.18■□□□□ 0.98
HMG20B-216ENST00000585900 CDK7P50613 346 aa21.18■□□□□ 0.98
HMG20B-216ENST00000585900 PPP2R5BQ15173 497 aa21.18■□□□□ 0.98
HMG20B-216ENST00000585900 SEC23AQ15436 765 aa21.18■□□□□ 0.98
HMG20B-216ENST00000585900 SHHQ15465 462 aa21.18■□□□□ 0.98
HMG20B-216ENST00000585900 QRICH1Q2TAL8 776 aa21.18■□□□□ 0.98
HMG20B-216ENST00000585900 BRDTQ58F21 947 aaPredicted RBP21.18■□□□□ 0.98
HMG20B-216ENST00000585900 CYB5R4Q7L1T6 521 aa21.18■□□□□ 0.98
HMG20B-216ENST00000585900 NCOA7Q8NI08 942 aa21.18■□□□□ 0.98
HMG20B-216ENST00000585900 SEZ6LQ9BYH1 1024 aa21.18■□□□□ 0.98
HMG20B-216ENST00000585900 VAT1LQ9HCJ6 419 aa21.18■□□□□ 0.98
HMG20B-216ENST00000585900 MRPL11Q9Y3B7 192 aaKnown RBP21.18■□□□□ 0.98
HMG20B-216ENST00000585900 ITGB8P26012 769 aa21.17■□□□□ 0.98
HMG20B-216ENST00000585900 CPT1AP50416 773 aa21.17■□□□□ 0.98
HMG20B-216ENST00000585900 C9orf50Q5SZB4 431 aa21.17■□□□□ 0.98
HMG20B-216ENST00000585900 SCFD2Q8WU76 684 aa21.17■□□□□ 0.98
HMG20B-216ENST00000585900 JMJD4Q9H9V9 463 aa21.17■□□□□ 0.98
HMG20B-216ENST00000585900 TBX21Q9UL17 535 aa21.17■□□□□ 0.98
HMG20B-216ENST00000585900 KLRF2D3W0D1 207 aa21.16■□□□□ 0.98
HMG20B-216ENST00000585900 NKRFO15226 690 aaKnown RBP eCLIP21.16■□□□□ 0.98
HMG20B-216ENST00000585900 TIMP1P01033 207 aa21.16■□□□□ 0.98
HMG20B-216ENST00000585900 EDNRBP24530 442 aa21.16■□□□□ 0.98
HMG20B-216ENST00000585900 ITGA7Q13683 1181 aa21.16■□□□□ 0.98
HMG20B-216ENST00000585900 WTAPQ15007 396 aa21.16■□□□□ 0.98
HMG20B-216ENST00000585900 Q7L0L9 218 aa21.16■□□□□ 0.98
HMG20B-216ENST00000585900 FAM126BQ8IXS8 530 aa21.16■□□□□ 0.98
HMG20B-216ENST00000585900 OR6J1Q8NGC5 347 aa21.16■□□□□ 0.98
HMG20B-216ENST00000585900 RNPC3Q96LT9 517 aaKnown RBP21.16■□□□□ 0.98
HMG20B-216ENST00000585900 AMNQ9BXJ7 453 aa21.16■□□□□ 0.98
HMG20B-216ENST00000585900 POLR3EQ9NVU0 708 aa21.16■□□□□ 0.98
HMG20B-216ENST00000585900 RBM47A0AV96 593 aaKnown RBP21.15■□□□□ 0.98
HMG20B-216ENST00000585900 E7EWF7 191 aa21.15■□□□□ 0.98
HMG20B-216ENST00000585900 TRAF1Q13077 416 aa21.15■□□□□ 0.98
HMG20B-216ENST00000585900 NSUN6Q8TEA1 469 aaKnown RBP21.15■□□□□ 0.98
HMG20B-216ENST00000585900 GPHNQ9NQX3 736 aaPredicted RBP21.15■□□□□ 0.98
HMG20B-216ENST00000585900 PTGS1P23219 599 aa21.14■□□□□ 0.97
HMG20B-216ENST00000585900 PPIGQ13427 754 aaKnown RBP eCLIP21.14■□□□□ 0.979e-9■■□□□ 13.7
HMG20B-216ENST00000585900 MFSD5Q6N075 450 aa21.14■□□□□ 0.97
HMG20B-216ENST00000585900 STAG2Q8N3U4 1231 aa21.14■□□□□ 0.97
HMG20B-216ENST00000585900 TMEM199Q8N511 208 aa21.14■□□□□ 0.97
HMG20B-216ENST00000585900 MAP4K1Q92918 833 aa21.14■□□□□ 0.97
HMG20B-216ENST00000585900 MAD2L2Q9UI95 211 aa21.14■□□□□ 0.97
HMG20B-216ENST00000585900 RBM8AQ9Y5S9 174 aaKnown RBP21.14■□□□□ 0.97
HMG20B-216ENST00000585900 ZBTB5O15062 677 aa21.13■□□□□ 0.97
HMG20B-216ENST00000585900 TTLL4Q14679 1199 aa21.13■□□□□ 0.97
HMG20B-216ENST00000585900 GRM4Q14833 912 aa21.13■□□□□ 0.97
HMG20B-216ENST00000585900 TMEM67Q5HYA8 995 aa21.13■□□□□ 0.97
HMG20B-216ENST00000585900 TMEM63BQ5T3F8 832 aa21.13■□□□□ 0.97
HMG20B-216ENST00000585900 ZNF697Q5TEC3 545 aa21.13■□□□□ 0.97
HMG20B-216ENST00000585900 FAM109BQ6ICB4 259 aaPredicted RBP21.13■□□□□ 0.97
HMG20B-216ENST00000585900 SLC43A3Q8NBI5 491 aa21.13■□□□□ 0.97
HMG20B-216ENST00000585900 SYTL5Q8TDW5 730 aaPredicted RBP21.13■□□□□ 0.97
HMG20B-216ENST00000585900 PPP1R12CQ9BZL4 782 aa21.13■□□□□ 0.97
HMG20B-216ENST00000585900 CFBP00751 764 aa21.12■□□□□ 0.97
HMG20B-216ENST00000585900 MYL3P08590 195 aa21.12■□□□□ 0.97
HMG20B-216ENST00000585900 TXNP10599 105 aaKnown RBP21.12■□□□□ 0.97
HMG20B-216ENST00000585900 ARHGEF16Q5VV41 709 aa21.12■□□□□ 0.97
HMG20B-216ENST00000585900 CENPQQ7L2Z9 268 aaPredicted RBP21.12■□□□□ 0.97
HMG20B-216ENST00000585900 CATIPQ7Z7H3 387 aa21.12■□□□□ 0.97
HMG20B-216ENST00000585900 IWS1Q96ST2 819 aa21.12■□□□□ 0.97
HMG20B-216ENST00000585900 RMDN3Q96TC7 470 aa21.12■□□□□ 0.97
HMG20B-216ENST00000585900 MTMR10Q9NXD2 777 aa21.12■□□□□ 0.97
HMG20B-216ENST00000585900 PALM3A6NDB9 673 aaPredicted RBP21.11■□□□□ 0.97
HMG20B-216ENST00000585900 CD4P01730 458 aa21.11■□□□□ 0.97
HMG20B-216ENST00000585900 EPHB4P54760 987 aa21.11■□□□□ 0.97
HMG20B-216ENST00000585900 PSMC6P62333 389 aa21.11■□□□□ 0.97
HMG20B-216ENST00000585900 SMAD3P84022 425 aaKnown RBP21.11■□□□□ 0.97
HMG20B-216ENST00000585900 STXBP2Q15833 593 aa21.11■□□□□ 0.97
HMG20B-216ENST00000585900 HOMER1Q86YM7 354 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms