RNA–Protein interactions for RNA: ENST00000584876.1

TRAPPC8-213, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-213ENST00000584876 ZMYM6O95789 1325 aa27.07■■□□□ 1.92
TRAPPC8-213ENST00000584876 FGBP02675 491 aa27.06■■□□□ 1.92
TRAPPC8-213ENST00000584876 HSPD1P10809 573 aaKnown RBP27.06■■□□□ 1.92
TRAPPC8-213ENST00000584876 CCL23P55773 120 aa27.06■■□□□ 1.92
TRAPPC8-213ENST00000584876 DUSP28Q4G0W2 176 aa27.06■■□□□ 1.92
TRAPPC8-213ENST00000584876 ZNF589Q86UQ0 364 aaPredicted RBP27.06■■□□□ 1.92
TRAPPC8-213ENST00000584876 GAS2L1Q99501 681 aaPredicted RBP27.06■■□□□ 1.92
TRAPPC8-213ENST00000584876 CXXC1Q9P0U4 656 aaPredicted RBP27.06■■□□□ 1.92
TRAPPC8-213ENST00000584876 SPTBN5Q9NRC6 3674 aaKnown RBP27.05■■□□□ 1.92
TRAPPC8-213ENST00000584876 LOC102724159A0A0B4J2E5 919 aa27.05■■□□□ 1.92
TRAPPC8-213ENST00000584876 PDHBP11177 359 aa27.05■■□□□ 1.92
TRAPPC8-213ENST00000584876 HAND2P61296 217 aa27.05■■□□□ 1.92
TRAPPC8-213ENST00000584876 NMIQ13287 307 aaPredicted RBP27.05■■□□□ 1.92
TRAPPC8-213ENST00000584876 HDAC1Q13547 482 aaPredicted RBP27.05■■□□□ 1.92
TRAPPC8-213ENST00000584876 PWP2Q15269 919 aaKnown RBP27.05■■□□□ 1.92
TRAPPC8-213ENST00000584876 RAB30Q15771 203 aa27.05■■□□□ 1.92
TRAPPC8-213ENST00000584876 SLC30A10Q6XR72 485 aa27.05■■□□□ 1.92
TRAPPC8-213ENST00000584876 WDR11Q9BZH6 1224 aa27.05■■□□□ 1.92
TRAPPC8-213ENST00000584876 MSRAQ9UJ68 235 aa27.05■■□□□ 1.92
TRAPPC8-213ENST00000584876 CALML3P27482 149 aa27.04■■□□□ 1.92
TRAPPC8-213ENST00000584876 TICAM2Q86XR7 235 aa27.04■■□□□ 1.92
TRAPPC8-213ENST00000584876 WNT8AQ9H1J5 351 aa27.04■■□□□ 1.92
TRAPPC8-213ENST00000584876 PRDM12Q9H4Q4 367 aa27.04■■□□□ 1.92
TRAPPC8-213ENST00000584876 CCDC171Q6TFL3 1326 aa27.04■■□□□ 1.92
TRAPPC8-213ENST00000584876 LAMA4Q16363 1823 aa27.03■■□□□ 1.92
TRAPPC8-213ENST00000584876 OTOP2Q7RTS6 562 aa27.03■■□□□ 1.92
TRAPPC8-213ENST00000584876 CLEC4DQ8WXI8 215 aa27.03■■□□□ 1.92
TRAPPC8-213ENST00000584876 SYMPKQ92797 1274 aaKnown RBP27.03■■□□□ 1.92
TRAPPC8-213ENST00000584876 ALDH8A1Q9H2A2 487 aaPredicted RBP27.03■■□□□ 1.92
TRAPPC8-213ENST00000584876 POLR3EQ9NVU0 708 aa27.03■■□□□ 1.92
TRAPPC8-213ENST00000584876 PNMA2Q9UL42 364 aa27.03■■□□□ 1.92
TRAPPC8-213ENST00000584876 SCN10AQ9Y5Y9 1956 aa27.02■■□□□ 1.92
TRAPPC8-213ENST00000584876 TRIM6-TRIM34B2RNG4 842 aa27.02■■□□□ 1.92
TRAPPC8-213ENST00000584876 ZNF543Q08ER8 600 aa27.02■■□□□ 1.92
TRAPPC8-213ENST00000584876 AKNAD1Q5T1N1 836 aa27.02■■□□□ 1.92
TRAPPC8-213ENST00000584876 RNF207Q6ZRF8 634 aa27.02■■□□□ 1.92
TRAPPC8-213ENST00000584876 MFSD6Q6ZSS7 791 aa27.02■■□□□ 1.92
TRAPPC8-213ENST00000584876 CHD9Q3L8U1 2897 aa27.02■■□□□ 1.92
TRAPPC8-213ENST00000584876 TTC28Q96AY4 2481 aa27.01■■□□□ 1.92
TRAPPC8-213ENST00000584876 SCN5AQ14524 2016 aa27.01■■□□□ 1.91
TRAPPC8-213ENST00000584876 RBM47A0AV96 593 aaKnown RBP27.01■■□□□ 1.91
TRAPPC8-213ENST00000584876 MYL3P08590 195 aa27.01■■□□□ 1.91
TRAPPC8-213ENST00000584876 PCP11498 1178 aaKnown RBP27.01■■□□□ 1.91
TRAPPC8-213ENST00000584876 CPT1AP50416 773 aa27.01■■□□□ 1.91
TRAPPC8-213ENST00000584876 TBC1D10CQ8IV04 446 aa27.01■■□□□ 1.91
TRAPPC8-213ENST00000584876 OR6J1Q8NGC5 347 aa27.01■■□□□ 1.91
TRAPPC8-213ENST00000584876 TTC14Q96N46 770 aa27.01■■□□□ 1.91
TRAPPC8-213ENST00000584876 NKX2-4Q9H2Z4 354 aa27.01■■□□□ 1.91
TRAPPC8-213ENST00000584876 WDR19Q8NEZ3 1342 aa27■■□□□ 1.91
TRAPPC8-213ENST00000584876 PURAQ00577 322 aaKnown RBP27■■□□□ 1.91
TRAPPC8-213ENST00000584876 PDE4DQ08499 809 aa27■■□□□ 1.91
TRAPPC8-213ENST00000584876 RPUSD2Q8IZ73 545 aaKnown RBP27■■□□□ 1.91
TRAPPC8-213ENST00000584876 PPM1EQ8WY54 764 aa27■■□□□ 1.91
TRAPPC8-213ENST00000584876 RILPL2Q969X0 211 aa27■■□□□ 1.91
TRAPPC8-213ENST00000584876 SCLYQ96I15 445 aa27■■□□□ 1.91
TRAPPC8-213ENST00000584876 MPHOSPH6Q99547 160 aaKnown RBP27■■□□□ 1.91
TRAPPC8-213ENST00000584876 LNPKQ9C0E8 428 aa27■■□□□ 1.91
TRAPPC8-213ENST00000584876 TRMT13Q9NUP7 481 aaKnown RBP27■■□□□ 1.91
TRAPPC8-213ENST00000584876 MYH6P13533 1939 aa27■■□□□ 1.91
TRAPPC8-213ENST00000584876 TNKSO95271 1327 aa26.99■■□□□ 1.91
TRAPPC8-213ENST00000584876 SNHG28P0DPA3 235 aa26.99■■□□□ 1.91
TRAPPC8-213ENST00000584876 RPS6P62753 249 aaKnown RBP26.99■■□□□ 1.91
TRAPPC8-213ENST00000584876 PPP2R5BQ15173 497 aa26.99■■□□□ 1.91
TRAPPC8-213ENST00000584876 TJAP1Q5JTD0 557 aa26.99■■□□□ 1.91
TRAPPC8-213ENST00000584876 RNF41Q9H4P4 317 aaPredicted RBP26.99■■□□□ 1.91
TRAPPC8-213ENST00000584876 GPHNQ9NQX3 736 aaPredicted RBP26.99■■□□□ 1.91
TRAPPC8-213ENST00000584876 YBX2Q9Y2T7 364 aaKnown RBP26.99■■□□□ 1.91
TRAPPC8-213ENST00000584876 RAD50Q92878 1312 aa26.98■■□□□ 1.91
TRAPPC8-213ENST00000584876 SUPT20HL2P0C7V6 817 aa26.98■■□□□ 1.91
TRAPPC8-213ENST00000584876 MTG1Q9BT17 334 aaPredicted RBP26.98■■□□□ 1.91
TRAPPC8-213ENST00000584876 SLC28A3Q9HAS3 691 aa26.98■■□□□ 1.91
TRAPPC8-213ENST00000584876 PRDM6Q9NQX0 595 aa26.98■■□□□ 1.91
TRAPPC8-213ENST00000584876 TANC1Q9C0D5 1861 aa26.98■■□□□ 1.91
TRAPPC8-213ENST00000584876 NEDD4P46934 1319 aa26.97■■□□□ 1.91
TRAPPC8-213ENST00000584876 NKRFO15226 690 aaKnown RBP eCLIP26.97■■□□□ 1.91
TRAPPC8-213ENST00000584876 CYP2C9P11712 490 aa26.97■■□□□ 1.91
TRAPPC8-213ENST00000584876 EDNRBP24530 442 aa26.97■■□□□ 1.91
TRAPPC8-213ENST00000584876 MFAP1P55081 439 aaKnown RBP26.97■■□□□ 1.91
TRAPPC8-213ENST00000584876 BRDTQ58F21 947 aaPredicted RBP26.97■■□□□ 1.91
TRAPPC8-213ENST00000584876 DNERQ8NFT8 737 aa26.97■■□□□ 1.91
TRAPPC8-213ENST00000584876 ESR2Q92731 530 aa26.97■■□□□ 1.91
TRAPPC8-213ENST00000584876 SLC4A7Q9Y6M7 1214 aa26.97■■□□□ 1.91
TRAPPC8-213ENST00000584876 ZBBXA8MT70 800 aa26.96■■□□□ 1.91
TRAPPC8-213ENST00000584876 ADGRE1Q14246 886 aa26.96■■□□□ 1.91
TRAPPC8-213ENST00000584876 USH1GQ495M9 461 aa26.96■■□□□ 1.91
TRAPPC8-213ENST00000584876 FAM47CQ5HY64 1035 aa26.96■■□□□ 1.91
TRAPPC8-213ENST00000584876 GPATCH4Q5T3I0 446 aaKnown RBP26.96■■□□□ 1.91
TRAPPC8-213ENST00000584876 SCFD2Q8WU76 684 aa26.96■■□□□ 1.91
TRAPPC8-213ENST00000584876 ZKSCAN3Q9BRR0 538 aa26.96■■□□□ 1.91
TRAPPC8-213ENST00000584876 GOLGA8HP0CJ92 632 aa26.95■■□□□ 1.9
TRAPPC8-213ENST00000584876 IGFBP4P22692 258 aa26.95■■□□□ 1.9
TRAPPC8-213ENST00000584876 RABGGTBP53611 331 aa26.95■■□□□ 1.9
TRAPPC8-213ENST00000584876 COPS5Q92905 334 aa26.95■■□□□ 1.9
TRAPPC8-213ENST00000584876 VWCEQ96DN2 955 aa26.95■■□□□ 1.9
TRAPPC8-213ENST00000584876 CHD7Q9P2D1 2997 aa26.95■■□□□ 1.9
TRAPPC8-213ENST00000584876 B4DLN1 442 aa26.94■■□□□ 1.9
TRAPPC8-213ENST00000584876 PFKMP08237 780 aa26.94■■□□□ 1.9
TRAPPC8-213ENST00000584876 SDSP20132 328 aa26.94■■□□□ 1.9
TRAPPC8-213ENST00000584876 MRPL12P52815 198 aaKnown RBP26.94■■□□□ 1.9
TRAPPC8-213ENST00000584876 NBPF20Q3BBV1 942 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms